FFCP PHASE1:Mm9::chrX:159339694..159339705,+: Difference between revisions
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{{FFCP|EntrezGene=55936|HGNC=|UniProt=P70303|association_with_transcript=0bp_to_ENSMUST00000112302_5end|description=CAGE_peak_4_at_Ctps2_5end|id=chrX:159339694..159339705,+|ontology_enrichment_celltype=CL:0000355!4.08e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,9.38e-17,9;CL:0000680,2.89e-11,6;CL:0000187,2.89e-11,6;CL:0000056,2.89e-11,6;CL:0000222,1.53e-09,7;CL:0000557,6.62e-08,7;CL:0000049,1.43e-07,19;CL:0000192,3.24e-07,3;CL:0000359,3.24e-07,3;CL:0002539,3.24e-07,3;CL:0000514,3.24e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.49e-07,3;DOID:4045,4.49e-07,3|ontology_enrichment_uberon=UBERON:0001134!4.08e-07!9;UBERON:0002036!4.08e-07!9;UBERON:0002385!4.08e-07!9;UBERON:0000486!4.08e-07!9;UBERON:0001015!4.08e-07!9;UBERON:0004290!4.08e-07!9;UBERON:0003082!4.08e-07!9;UBERON:0000383!6.59e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.38e-17,9;UBERON:0002036,9.38e-17,9;UBERON:0002385,9.38e-17,9;UBERON:0000486,9.38e-17,9;UBERON:0007503,9.38e-17,9;UBERON:0001015,9.38e-17,9;UBERON:0002329,9.38e-17,9;UBERON:0003082,9.38e-17,9;UBERON:0003059,9.38e-17,9;UBERON:0007282,9.38e-17,9;UBERON:0004290,9.38e-17,9;UBERON:0009618,9.38e-17,9;UBERON:0000383,6.91e-15,10;UBERON:0007524,2.32e-13,11;UBERON:0003077,2.32e-13,11;UBERON:0007285,2.32e-13,11;UBERON:0002369,8.84e-10,7;UBERON:0006858,8.84e-10,7;UBERON:0002204,1.31e-09,32;UBERON:0005256,1.52e-08,45;UBERON:0001135,3.24e-07,3;UBERON:0004237,3.24e-07,3;UBERON:0004695,3.24e-07,3;UBERON:0002111,3.24e-07,3;UBERON:0004178,3.24e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.513653904676515,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0,0,2.51118978442145,4.6880120671428,3.66466620781659,2.94115744015507,5.46436387966757,1.94204141212461,2.7697299954627,3.4468156614635,9.9115246167308,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0.336093799142464,1.54355661621568,1.71920063963254,1.03134418455488,0.202316460859598,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0,0.768436610643109,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0,2.04460721999597,2.41828992341714,0,0.860423876981386,0,0,0,0,0,1.87473354835864,1.29893002301434,1.41335829804136,0.281686839553361,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,0,0.258937883647172,0.445326417194474,2.4287945747259,2.74018930480927,3.68984795609694,2.41156224884196,2.58695155698551,1.63366568728578,0.741584903203122,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0.41889341362691,0,2.63593273913025,4.19931911695385,2.92261522268049,0.449371918214468,0.915001205637253,0.251308704225729,0.347648640384553,0.511430914660661,0.20778804455956,0,0.712875546952214,0.746441823660558,0.252722758433675,0,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,3.51106593656617,3.86021860672073,5.68326998791185,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.162137619091711,0.438599962275997,0.219550115291051,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0.287696137450811,1.29708181420028,0.549122826376163,0,1.48856379067401,0,0,0,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0,1.19021820443007,2.92700471786698,0.157635144106191,0.221464689648775,0.478364305972461,0,0.518054945597687,0.433947175744535,4.52373851817817,5.4390568381871,0,0,0.160550589987792,0.234423373184406,3.93443868904021,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.642642632843614,1.13552068166615,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,1.522324745573,0,0.21183207086382,0.220528398054962,0.16488625294148,0.645857706783622,0.844380948994182,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,1.18984900995699,0.979660166265606,1.38199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0.330916980914195,0,0.258319646955462,0.337912250981556,0.234714477291508,0,0.209718688851422,0,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0.221985953374065,0.179427713218951,0.503653849092235,0,2.25218970541418,1.09890974560359,0.428736758158132,0,0,1.38097570952153,0.572895513439397,0.343706364687375,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0,0,0,0,0.252697211763798,0.25347929989024,0.754505365544305,0.187283014939765,0.256100609619477,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.423073039458382,0,0,0,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843|short_description=p4@Ctps2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55936 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P70303 | |||
|association_with_transcript=0bp_to_ENSMUST00000112302_5end | |||
|cluster_id=chrX:159339694..159339705,+ | |||
|description=CAGE_peak_4_at_Ctps2_5end | |||
|id=chrX:159339694..159339705,+ | |||
|ontology_enrichment_celltype=CL:0000355!4.08e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,9.38e-17,9;CL:0000680,2.89e-11,6;CL:0000187,2.89e-11,6;CL:0000056,2.89e-11,6;CL:0000222,1.53e-09,7;CL:0000557,6.62e-08,7;CL:0000049,1.43e-07,19;CL:0000192,3.24e-07,3;CL:0000359,3.24e-07,3;CL:0002539,3.24e-07,3;CL:0000514,3.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.49e-07,3;DOID:4045,4.49e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.08e-07!9;UBERON:0002036!4.08e-07!9;UBERON:0002385!4.08e-07!9;UBERON:0000486!4.08e-07!9;UBERON:0001015!4.08e-07!9;UBERON:0004290!4.08e-07!9;UBERON:0003082!4.08e-07!9;UBERON:0000383!6.59e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.38e-17,9;UBERON:0002036,9.38e-17,9;UBERON:0002385,9.38e-17,9;UBERON:0000486,9.38e-17,9;UBERON:0007503,9.38e-17,9;UBERON:0001015,9.38e-17,9;UBERON:0002329,9.38e-17,9;UBERON:0003082,9.38e-17,9;UBERON:0003059,9.38e-17,9;UBERON:0007282,9.38e-17,9;UBERON:0004290,9.38e-17,9;UBERON:0009618,9.38e-17,9;UBERON:0000383,6.91e-15,10;UBERON:0007524,2.32e-13,11;UBERON:0003077,2.32e-13,11;UBERON:0007285,2.32e-13,11;UBERON:0002369,8.84e-10,7;UBERON:0006858,8.84e-10,7;UBERON:0002204,1.31e-09,32;UBERON:0005256,1.52e-08,45;UBERON:0001135,3.24e-07,3;UBERON:0004237,3.24e-07,3;UBERON:0004695,3.24e-07,3;UBERON:0002111,3.24e-07,3;UBERON:0004178,3.24e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0.513653904676515,0,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.340173160604279,0,0.261199789138935,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0,0,0,2.51118978442145,4.6880120671428,3.66466620781659,2.94115744015507,5.46436387966757,1.94204141212461,2.7697299954627,3.4468156614635,9.9115246167308,0.782391344348039,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0.167782606057736,0,0.336093799142464,1.54355661621568,1.71920063963254,1.03134418455488,0.202316460859598,0,0.633831403506179,0.677689064138264,0,0.449949858640699,0,0.7104801149461,0,0.768436610643109,0,0,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.255374676170375,0.614426133024974,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.569486723196412,0,2.04460721999597,2.41828992341714,0,0.860423876981386,0,0,0,0,0,1.87473354835864,1.29893002301434,1.41335829804136,0.281686839553361,1.28326477414318,0,7.11066703153331,0.216491041011214,0,0,0,0.258937883647172,0.445326417194474,2.4287945747259,2.74018930480927,3.68984795609694,2.41156224884196,2.58695155698551,1.63366568728578,0.741584903203122,0.144599356919912,0,0,0.441683036920787,0.484875253135222,0,0,0.41889341362691,0,2.63593273913025,4.19931911695385,2.92261522268049,0.449371918214468,0.915001205637253,0.251308704225729,0.347648640384553,0.511430914660661,0.20778804455956,0,0.712875546952214,0.746441823660558,0.252722758433675,0,0.130120442962704,0,0,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0,0,3.51106593656617,3.86021860672073,5.68326998791185,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0.162137619091711,0.438599962275997,0.219550115291051,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0.898819408654221,0,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0.393117990226406,0,0,0.482354319504834,0.25462585178142,0.287696137450811,1.29708181420028,0.549122826376163,0,1.48856379067401,0,0,0,0,0.923765950833023,0,0.162964976442026,0.169745085775188,0.234690248288502,0,1.19021820443007,2.92700471786698,0.157635144106191,0.221464689648775,0.478364305972461,0,0.518054945597687,0.433947175744535,4.52373851817817,5.4390568381871,0,0,0.160550589987792,0.234423373184406,3.93443868904021,0.252470927204373,0,0.390438744296638,0,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.642642632843614,1.13552068166615,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0.356737635204141,0,1.522324745573,0,0.21183207086382,0.220528398054962,0.16488625294148,0.645857706783622,0.844380948994182,0.119372344003136,0.328281799490123,0.291480836629851,0.18542530201051,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.136694227721025,0,1.18984900995699,0.979660166265606,1.38199973804424,0,0,0,0.108005340821801,0,0.218362563746178,0,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0.330916980914195,0,0.258319646955462,0.337912250981556,0.234714477291508,0,0.209718688851422,0,0.576060012515731,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0.221985953374065,0.179427713218951,0.503653849092235,0,2.25218970541418,1.09890974560359,0.428736758158132,0,0,1.38097570952153,0.572895513439397,0.343706364687375,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,0.906284817968409,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0,0,0,0,0.252697211763798,0.25347929989024,0.754505365544305,0.187283014939765,0.256100609619477,0.114870937911227,0,0,0.38581844092741,0,0.147198920134397,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.423073039458382,0,0,0,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Ctps2 | |||
}} |
Latest revision as of 18:00, 1 October 2015
Short description: | p4@Ctps2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ctps2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000112302_5end |
EntrezGene: | Ctps2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 9.38e-17 | 9 |
muscle precursor cell | 2.89e-11 | 6 |
muscle cell | 2.89e-11 | 6 |
myoblast | 2.89e-11 | 6 |
mesodermal cell | 1.53e-09 | 7 |
granulocyte monocyte progenitor cell | 6.62e-08 | 7 |
common myeloid progenitor | 1.43e-07 | 19 |
smooth muscle cell | 3.24e-07 | 3 |
vascular associated smooth muscle cell | 3.24e-07 | 3 |
aortic smooth muscle cell | 3.24e-07 | 3 |
smooth muscle myoblast | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 9.38e-17 | 9 |
striated muscle tissue | 9.38e-17 | 9 |
muscle tissue | 9.38e-17 | 9 |
multilaminar epithelium | 9.38e-17 | 9 |
epithelial vesicle | 9.38e-17 | 9 |
musculature | 9.38e-17 | 9 |
somite | 9.38e-17 | 9 |
myotome | 9.38e-17 | 9 |
presomitic mesoderm | 9.38e-17 | 9 |
presumptive segmental plate | 9.38e-17 | 9 |
dermomyotome | 9.38e-17 | 9 |
trunk paraxial mesoderm | 9.38e-17 | 9 |
musculature of body | 6.91e-15 | 10 |
dense mesenchyme tissue | 2.32e-13 | 11 |
paraxial mesoderm | 2.32e-13 | 11 |
presumptive paraxial mesoderm | 2.32e-13 | 11 |
adrenal gland | 8.84e-10 | 7 |
adrenal/interrenal gland | 8.84e-10 | 7 |
musculoskeletal system | 1.31e-09 | 32 |
trunk mesenchyme | 1.52e-08 | 45 |
smooth muscle tissue | 3.24e-07 | 3 |
blood vessel smooth muscle | 3.24e-07 | 3 |
arterial system smooth muscle | 3.24e-07 | 3 |
artery smooth muscle tissue | 3.24e-07 | 3 |
aorta smooth muscle tissue | 3.24e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.49e-07 | 3 |
muscle cancer | 4.49e-07 | 3 |