FFCP PHASE1:Hg19::chr12:67663079..67663088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=55832 | |EntrezGene=55832 | ||
| Line 8: | Line 8: | ||
|UniProt=Q86VP6 | |UniProt=Q86VP6 | ||
|association_with_transcript=18bp_to_ENST00000545606,NM_018448,uc001stn.2_5end | |association_with_transcript=18bp_to_ENST00000545606,NM_018448,uc001stn.2_5end | ||
|cluster_id=chr12:67663079..67663088,+ | |||
|description=CAGE_peak_11_at_CAND1_5end | |description=CAGE_peak_11_at_CAND1_5end | ||
|id=chr12:67663079..67663088,+ | |id=chr12:67663079..67663088,+ | ||
Latest revision as of 01:17, 20 September 2015
| Short description: | p11@CAND1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_CAND1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 18bp_to_ENST00000545606, NM_018448, uc001stn.2_5end |
| EntrezGene: | CAND1 |
| HGNC: | 30688 |
| UniProt: | Q86VP6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@CAND1 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 1.82e-23 | 7 |
| germ cell | 1.82e-23 | 7 |
| embryonic stem cell | 6.84e-22 | 5 |
| neuronal stem cell | 8.93e-14 | 8 |
| neuron | 8.17e-11 | 6 |
| neuroblast | 8.17e-11 | 6 |
| electrically signaling cell | 8.17e-11 | 6 |
| lung fibroblast | 3.11e-08 | 1 |
| peptide hormone secreting cell | 7.10e-08 | 1 |
| enteroendocrine cell | 7.10e-08 | 1 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 1.34e-29 | 8 |
| male reproductive organ | 2.06e-21 | 11 |
| gonad | 7.29e-15 | 21 |
| indifferent external genitalia | 7.29e-15 | 21 |
| indifferent gonad | 7.29e-15 | 21 |
| gonad primordium | 7.29e-15 | 21 |
| external genitalia | 3.76e-14 | 22 |
| male organism | 1.85e-10 | 22 |
| male reproductive system | 1.85e-10 | 22 |
| body cavity or lining | 1.13e-09 | 49 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 5.65e-14 | 22 |
| germ cell cancer | 5.65e-14 | 22 |
| bronchus cancer | 5.84e-09 | 7 |
| bronchogenic carcinoma | 5.84e-09 | 7 |
| islet cell tumor | 3.34e-08 | 1 |
| endocrine pancreas cancer | 3.34e-08 | 1 |
| pancreatic endocrine carcinoma | 3.34e-08 | 1 |
| somatostatinoma | 7.10e-08 | 1 |
| cell type cancer | 1.46e-07 | 143 |
| lung cancer | 3.11e-07 | 15 |
Showing 1 to 10 of 12 entries
