FFCP PHASE1:Hg19::chr5:146939412..146939419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=153469 | |EntrezGene=153469 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC= | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-137bp_to_ENST00000506321,NR_038902,uc003lop.1_5end | |association_with_transcript=-137bp_to_ENST00000506321,NR_038902,uc003lop.1_5end | ||
|cluster_id=chr5:146939412..146939419,+ | |||
|coexpression_cluster_id=C127 | |coexpression_cluster_id=C127 | ||
|description=CAGE_peak_2_at_LOC153469_5end | |description=CAGE_peak_2_at_LOC153469_5end |
Latest revision as of 22:33, 15 September 2015
Short description: | p2@LOC153469 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC153469_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -137bp_to_ENST00000506321, NR_038902, uc003lop.1_5end |
EntrezGene: | LOC153469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@LOC153469 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.09e-14 | 3 |
ciliated epithelial cell | 2.09e-14 | 3 |
multi-ciliated epithelial cell | 2.09e-14 | 3 |
non-pigmented ciliary epithelial cell | 2.09e-14 | 3 |
crystallin accumulating cell | 3.42e-11 | 4 |
vertebrate lens cell | 3.42e-11 | 4 |
lens epithelial cell | 3.42e-11 | 4 |
columnar/cuboidal epithelial cell | 7.67e-07 | 27 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 9.91e-41 | 1 |
paranasal sinus | 9.91e-41 | 1 |
pigment epithelium of eye | 2.51e-15 | 11 |
ciliary epithelium | 2.09e-14 | 3 |
ciliary body | 2.09e-14 | 3 |
anterior segment of eyeball | 2.82e-12 | 14 |
cuboidal epithelium | 3.42e-11 | 4 |
transparent eye structure | 3.42e-11 | 4 |
simple cuboidal epithelium | 3.42e-11 | 4 |
cranial placode | 3.42e-11 | 4 |
Showing 1 to 10 of 33 entries
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 9.91e-41 | 1 |
maxillary sinus cancer | 9.91e-41 | 1 |
lung small cell carcinoma | 2.53e-11 | 4 |
respiratory system cancer | 5.28e-11 | 16 |
bronchus cancer | 5.08e-07 | 7 |
bronchogenic carcinoma | 5.08e-07 | 7 |
Showing 1 to 6 of 6 entries