FFCP PHASE1:Hg19::chr6:137105174..137105195,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:137105174..137105195,+ | |||
|description=CAGE_peak_at_chr6:137105174..137105195,+ | |description=CAGE_peak_at_chr6:137105174..137105195,+ | ||
|id=chr6:137105174..137105195,+ | |id=chr6:137105174..137105195,+ | ||
Latest revision as of 19:55, 30 July 2015
| Short description: | p@chr6:137105174..137105195, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr6:137105174..137105195, + |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr6:137105174..137105195+ |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| myeloid cell | 3.09e-99 | 108 |
| common myeloid progenitor | 3.09e-99 | 108 |
| hematopoietic stem cell | 2.04e-87 | 168 |
| myeloid leukocyte | 1.21e-86 | 72 |
| monopoietic cell | 4.70e-85 | 59 |
| monocyte | 4.70e-85 | 59 |
| monoblast | 4.70e-85 | 59 |
| promonocyte | 4.70e-85 | 59 |
| macrophage dendritic cell progenitor | 1.12e-81 | 61 |
| hematopoietic cell | 1.50e-81 | 177 |
Showing 1 to 10 of 30 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.04e-81 | 98 |
| blood island | 1.04e-81 | 98 |
| hemolymphoid system | 2.57e-74 | 108 |
| bone marrow | 3.17e-69 | 76 |
| immune system | 2.15e-63 | 93 |
| bone element | 9.04e-63 | 82 |
| skeletal element | 1.69e-55 | 90 |
| skeletal system | 4.76e-48 | 100 |
| lateral plate mesoderm | 9.41e-30 | 203 |
| connective tissue | 3.59e-25 | 371 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| myeloid leukemia | 1.34e-25 | 31 |
| leukemia | 2.30e-20 | 39 |
| hematologic cancer | 1.55e-19 | 51 |
| immune system cancer | 1.55e-19 | 51 |
Showing 1 to 4 of 4 entries
