FFCP PHASE1:Hg19::chr8:116588888..116588904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:116588888..116588904,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr8:116588888..116588904,+ | |description=CAGE_peak_at_chr8:116588888..116588904,+ | ||
Latest revision as of 14:10, 31 July 2015
| Short description: | p@chr8:116588888..116588904, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr8:116588888..116588904, + |
| Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr8:116588888..116588904+ |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 5.89e-131 | 48 |
| phagocyte | 5.89e-131 | 48 |
| monopoietic cell | 1.65e-124 | 59 |
| monocyte | 1.65e-124 | 59 |
| monoblast | 1.65e-124 | 59 |
| promonocyte | 1.65e-124 | 59 |
| myeloid leukocyte | 1.47e-120 | 72 |
| macrophage dendritic cell progenitor | 3.47e-120 | 61 |
| myeloid lineage restricted progenitor cell | 1.34e-115 | 66 |
| granulocyte monocyte progenitor cell | 9.30e-114 | 67 |
Showing 1 to 10 of 32 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 2.41e-99 | 76 |
| bone element | 1.80e-91 | 82 |
| skeletal element | 1.39e-82 | 90 |
| immune system | 1.21e-79 | 93 |
| hematopoietic system | 3.92e-75 | 98 |
| blood island | 3.92e-75 | 98 |
| skeletal system | 1.87e-73 | 100 |
| hemolymphoid system | 2.35e-67 | 108 |
| musculoskeletal system | 2.73e-40 | 167 |
| lateral plate mesoderm | 1.88e-31 | 203 |
Showing 1 to 10 of 14 entries
