UBERON:0003513: Difference between revisions
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|located_in= | |located_in= | ||
|name=trunk blood vessel | |name=trunk blood vessel | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002100 | |part_of=UBERON:0002100 | ||
Latest revision as of 17:40, 12 September 2014
| Name: | trunk blood vessel | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A blood vessel that is part of a trunk [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"blood vessel of torso" EXACT [OBOL:automatic] "blood vessel of trunk" EXACT [OBOL:automatic] "torso blood vessel" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001981(blood vessel) |
|---|---|
| part_of: | UBERON:0002100(trunk) |
Children
| is a: | UBERON:0003834 (thoracic segment blood vessel),UBERON:0003835 (abdominal segment blood vessel),UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
... further results Mouse (Mus musculus)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003513 (trunk blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:8928284..8928331,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr14:8928284..8928331, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85585991..85586025,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:85288471..85288502, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:117737077..117737096, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93895817..93895819, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:28911901..28911906,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr16:28911901..28911906, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:53111093..53111095, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:114422970..114422985,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:114422970..114422985, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:28107053..28107062,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:28107053..28107062, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:11935531..11935538, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:3311867..3311873,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:54785454..54785456, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:94580525..94580530,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:25364645..25364655, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:87745380..87745385,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:115280630..115280662,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691575..86691580,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:86691575..86691580, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:88890706..88890745,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:88890706..88890745, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429602..96429605,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:96429602..96429605, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8586393..8586401,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35106363..35106372,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35106363..35106372, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093764..35093773,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:74684893..74684910, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr4:126939557..126939562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:86713876..86713879,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:8400090..8400093,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chrX:166418658..166418683,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:92938260..92938264,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:92938260..92938264, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:97402708..97402712, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:39297570..39297573,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:39297570..39297573, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p8@Il3ra |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:54785454..54785456,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:54785454..54785456, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:118287827..118287833, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:129180613..129180616,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:129180613..129180616, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34798597..34798606,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:34798597..34798606, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93499468..93499494,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93499468..93499494, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:52781901..52781904,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:173044327..173044331, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:65159026..65159034,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr18:65159026..65159034, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85801525..85801529,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p6@Adamts1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:114123814..114123821,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:48398664..48398684,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113543694..113543702,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113543694..113543702, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:137570295..137570315,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr1:137570295..137570315, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:114250006..114250039, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93819538..93819549,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35106363..35106372,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35106363..35106372, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:109223756..109223764,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:109223756..109223764, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:8586393..8586401,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:8586393..8586401, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:117419958..117419964, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:119254092..119254100,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:119254092..119254100, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85586219..85586227,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85586219..85586227, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35094068..35094092,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:35094068..35094092, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34798555..34798562,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr7:87919399..87919406, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113053257..113053258,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:113053257..113053258, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:101778294..101778296,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr14:101778294..101778296, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:30944451..30944485,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr9:62199266..62199267, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr10:85586219..85586227, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:124112234..124112240,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr5:124112234..124112240, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:67870501..67870507,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:67870501..67870507, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:81955014..81955018,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:67870501..67870507,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr17:67870501..67870507, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82209805..82209851,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:9705000..9705004,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p4@Pag1 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:4336287..4336296,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:100000226..100000230,+#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr13:100000226..100000230, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117829935..117829959,-#_4496c44f15d11b0db3cb2e6f67e2a000 | p@chr11:117829935..117829959, - |
