FFCP PHASE2:Hg19::chr15:80696703..80696754,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9915 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:16876 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=16876 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9HBZ2 | ||
|association_with_transcript=10bp_to_ENST00000303329_5end | |association_with_transcript=10bp_to_ENST00000303329_5end | ||
|cluster_id=chr15:80696703..80696754,+ | |cluster_id=chr15:80696703..80696754,+ | ||
Latest revision as of 09:13, 19 September 2015
| Short description: | p1@ARNT2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ARNT2_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 10bp_to_ENST00000303329_5end |
| EntrezGene: | ARNT2 |
| HGNC: | 16876 |
| UniProt: | Q9HBZ2 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ARNT2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neurectodermal cell | 2.56e-10 | 59 |
| neural cell | 7.08e-10 | 25 |
| neuron associated cell | 4.42e-08 | 17 |
| neuron associated cell (sensu Vertebrata) | 4.42e-08 | 17 |
| migratory neural crest cell | 8.36e-08 | 41 |
| glial cell (sensu Vertebrata) | 4.29e-07 | 15 |
| glial cell | 4.29e-07 | 15 |
| glioblast | 4.29e-07 | 15 |
| glioblast (sensu Vertebrata) | 4.29e-07 | 15 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 4.94e-57 | 81 |
| nervous system | 1.11e-55 | 89 |
| brain | 1.81e-51 | 68 |
| future brain | 1.81e-51 | 68 |
| neural tube | 8.29e-46 | 56 |
| neural rod | 8.29e-46 | 56 |
| future spinal cord | 8.29e-46 | 56 |
| neural keel | 8.29e-46 | 56 |
| neural plate | 4.64e-45 | 82 |
| presumptive neural plate | 4.64e-45 | 82 |
Showing 1 to 10 of 57 entries
