Personal tools

FFCP PHASE1:Hg19::chr17:39646159..39646164,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:8689
|EntrezGene=8689
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:6454
|HGNC=6454
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:O76013
|UniProt=O76013
|association_with_transcript=-43bp_to_ENST00000328119,NM_003771,uc002hwt.2_5end
|association_with_transcript=-43bp_to_ENST00000328119,NM_003771,uc002hwt.2_5end
|cluster_id=chr17:39646159..39646164,-
|cluster_id=chr17:39646159..39646164,-

Latest revision as of 05:05, 20 September 2015

Short description:p1@KRT36
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_KRT36_5end
Coexpression cluster:C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival
Association with transcript: -43bp_to_ENST00000328119, NM_003771, uc002hwt.2_5end
EntrezGene:KRT36
HGNC: 6454
UniProt: O76013
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
50
100
150
200
250




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data