FFCP PHASE2:Hg19::chr1:152974218..152974231,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6707 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11268 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6707 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11268 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UBC9,B1AN48 | ||
|association_with_transcript=0bp_to_ENST00000331860,ENST00000443178,ENST00000495845,NM_001097589,NM_005416,uc001fax.3,uc001fay.2,uc001faz.3_5end | |association_with_transcript=0bp_to_ENST00000331860,ENST00000443178,ENST00000495845,NM_001097589,NM_005416,uc001fax.3,uc001fay.2,uc001faz.3_5end | ||
|cluster_id=chr1:152974218..152974231,+ | |cluster_id=chr1:152974218..152974231,+ |
Latest revision as of 04:08, 17 September 2015
Short description: | p1@SPRR3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRR3_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 0bp_to_ENST00000331860, ENST00000443178, ENST00000495845, NM_001097589, NM_005416, uc001fax.3, uc001fay.2, uc001faz.3_5end |
EntrezGene: | SPRR3 |
HGNC: | 11268 |
UniProt: | Q9UBC9B1AN48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SPRR3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endo-epithelial cell | 1.23e-23 | 42 |
endodermal cell | 1.58e-16 | 58 |
respiratory epithelial cell | 1.64e-15 | 13 |
epithelial cell of alimentary canal | 4.54e-13 | 20 |
acinar cell | 3.24e-11 | 5 |
epithelial cell | 6.63e-10 | 253 |
transitional epithelial cell | 2.28e-09 | 4 |
urothelial cell | 2.28e-09 | 4 |
protein secreting cell | 2.91e-09 | 6 |
epithelial cell of tracheobronchial tree | 1.37e-08 | 9 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
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endoderm-derived structure | 8.09e-19 | 160 |
endoderm | 8.09e-19 | 160 |
presumptive endoderm | 8.09e-19 | 160 |
orifice | 5.41e-17 | 36 |
oral opening | 1.55e-14 | 22 |
respiratory system | 2.88e-13 | 74 |
extraembryonic membrane | 3.35e-13 | 14 |
membranous layer | 3.35e-13 | 14 |
surface structure | 3.29e-12 | 99 |
mouth | 5.79e-12 | 29 |
Showing 1 to 10 of 37 entries