FFCP PHASE2:Hg19::chr1:155162693..155162707,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4582 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7508 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4582 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7508 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A5YRV1,B1AVQ5,E7EUW3,P15941,Q0VAP5,Q0VAP6,Q7Z551,Q7Z550,Q7Z538,A5YRU5,A5YRU7,A5YRV0,A5YRV2,A6ZID6,A6ZID7,A6ZID9,A6ZIE0,A6ZIE4,B6ECB3,A6ZIE6,B1AVR0,Q7Z541 | ||
|association_with_transcript=0bp_to_ENST00000338684,ENST00000368395,ENST00000425082,ENST00000466913,ENST00000494844,NM_001018016,NM_001018017,NM_001044390,NM_001044391,NM_001044392,NM_001044393,NM_001204285,NM_001204286,NM_001204287,NM_001204288,NM_001204289,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_001204294,NM_001204295,NM_001204296,NM_001204297,NM_002456,uc001fia.2,uc001fib.2,uc001fic.2,uc001fid.2,uc001fie.2,uc001fif.2,uc001fig.2,uc001fih.2,uc001fii.2,uc001fij.2,uc001fik.2,uc001fil.2,uc001fim.2,uc001fin.2,uc001fio.2,uc001fip.2,uc001fiq.2,uc001fis.1,uc001fit.2,uc001fiv.1,uc001fiw.1,uc009wpj.2,uc009wpk.2,uc009wpl.2,uc009wpm.2,uc009wpn.2,uc009wpo.2,uc009wpp.2,uc009wpq.2,uc009wpr.2,uc009wps.2,uc009wpt.2,uc009wpu.2,uc009wpv.2,uc009wpw.2,uc009wpx.2,uc009wpy.2,uc009wpz.2,uc009wqa.2,uc009wqb.2,uc009wqc.2,uc009wqd.2,uc009wqe.2,uc009wqf.2,uc009wqg.2,uc010pfm.1,uc010pfn.1,uc010pfo.1,uc010pfp.1,uc010pfq.1,uc010pfr.1,uc010pfs.1,uc010pft.1_5end | |association_with_transcript=0bp_to_ENST00000338684,ENST00000368395,ENST00000425082,ENST00000466913,ENST00000494844,NM_001018016,NM_001018017,NM_001044390,NM_001044391,NM_001044392,NM_001044393,NM_001204285,NM_001204286,NM_001204287,NM_001204288,NM_001204289,NM_001204290,NM_001204291,NM_001204292,NM_001204293,NM_001204294,NM_001204295,NM_001204296,NM_001204297,NM_002456,uc001fia.2,uc001fib.2,uc001fic.2,uc001fid.2,uc001fie.2,uc001fif.2,uc001fig.2,uc001fih.2,uc001fii.2,uc001fij.2,uc001fik.2,uc001fil.2,uc001fim.2,uc001fin.2,uc001fio.2,uc001fip.2,uc001fiq.2,uc001fis.1,uc001fit.2,uc001fiv.1,uc001fiw.1,uc009wpj.2,uc009wpk.2,uc009wpl.2,uc009wpm.2,uc009wpn.2,uc009wpo.2,uc009wpp.2,uc009wpq.2,uc009wpr.2,uc009wps.2,uc009wpt.2,uc009wpu.2,uc009wpv.2,uc009wpw.2,uc009wpx.2,uc009wpy.2,uc009wpz.2,uc009wqa.2,uc009wqb.2,uc009wqc.2,uc009wqd.2,uc009wqe.2,uc009wqf.2,uc009wqg.2,uc010pfm.1,uc010pfn.1,uc010pfo.1,uc010pfp.1,uc010pfq.1,uc010pfr.1,uc010pfs.1,uc010pft.1_5end | ||
|cluster_id=chr1:155162693..155162707,- | |cluster_id=chr1:155162693..155162707,- |
Latest revision as of 11:42, 17 September 2015
Short description: | p1@MUC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MUC1_5end |
Coexpression cluster: | C3877_lung_Alveolar_stomach_bronchogenic_gall_kidney_signet |
Association with transcript: | 0bp_to_ENST00000338684, ENST00000368395, ENST00000425082, ENST00000466913, ENST00000494844, NM_001018016, NM_001018017, NM_001044390, NM_001044391, NM_001044392, NM_001044393, NM_001204285, NM_001204286, NM_001204287, NM_001204288, NM_001204289, NM_001204290, NM_001204291, NM_001204292, NM_001204293, NM_001204294, NM_001204295, NM_001204296, NM_001204297, NM_002456, uc001fia.2, uc001fib.2, uc001fic.2, uc001fid.2, uc001fie.2, uc001fif.2, uc001fig.2, uc001fih.2, uc001fii.2, uc001fij.2, uc001fik.2, uc001fil.2, uc001fim.2, uc001fin.2, uc001fio.2, uc001fip.2, uc001fiq.2, uc001fis.1, uc001fit.2, uc001fiv.1, uc001fiw.1, uc009wpj.2, uc009wpk.2, uc009wpl.2, uc009wpm.2, uc009wpn.2, uc009wpo.2, uc009wpp.2, uc009wpq.2, uc009wpr.2, uc009wps.2, uc009wpt.2, uc009wpu.2, uc009wpv.2, uc009wpw.2, uc009wpx.2, uc009wpy.2, uc009wpz.2, uc009wqa.2, uc009wqb.2, uc009wqc.2, uc009wqd.2, uc009wqe.2, uc009wqf.2, uc009wqg.2, uc010pfm.1, uc010pfn.1, uc010pfo.1, uc010pfp.1, uc010pfq.1, uc010pfr.1, uc010pfs.1, uc010pft.1_5end |
EntrezGene: | MUC1 |
HGNC: | 7508 |
UniProt: | A5YRV1B1AVQ5E7EUW3P15941Q0VAP5Q0VAP6Q7Z551Q7Z550Q7Z538A5YRU5A5YRU7A5YRV0A5YRV2A6ZID6A6ZID7A6ZID9A6ZIE0A6ZIE4B6ECB3A6ZIE6B1AVR0Q7Z541 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.50e-21 | 253 |
endo-epithelial cell | 3.19e-16 | 42 |
endodermal cell | 1.36e-13 | 58 |
respiratory epithelial cell | 2.21e-08 | 13 |
epithelial cell of alimentary canal | 2.89e-07 | 20 |
kidney tubule cell | 5.11e-07 | 10 |
nephron tubule epithelial cell | 5.11e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.94e-26 | 160 |
endoderm | 1.94e-26 | 160 |
presumptive endoderm | 1.94e-26 | 160 |
subdivision of digestive tract | 2.06e-21 | 118 |
digestive system | 6.68e-21 | 145 |
digestive tract | 6.68e-21 | 145 |
primitive gut | 6.68e-21 | 145 |
foregut | 1.27e-16 | 87 |
respiratory system | 1.35e-16 | 74 |
respiratory tract | 3.24e-15 | 54 |
respiratory primordium | 5.07e-13 | 38 |
endoderm of foregut | 5.07e-13 | 38 |
renal system | 7.83e-11 | 48 |
segment of respiratory tract | 1.94e-10 | 47 |
urinary system structure | 2.58e-10 | 47 |
trunk region element | 4.53e-10 | 101 |
larynx | 1.94e-09 | 9 |
upper respiratory tract | 1.15e-08 | 19 |
endo-epithelium | 1.52e-08 | 82 |
subdivision of trunk | 3.54e-07 | 112 |
nephron tubule epithelium | 5.11e-07 | 10 |
thoracic cavity element | 8.06e-07 | 34 |
thoracic cavity | 8.06e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.65e-20 | 106 |
cell type cancer | 7.23e-14 | 143 |
adenocarcinoma | 1.49e-08 | 25 |