FFCP PHASE1:Hg19::chr3:197024690..197024740,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1739 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2900 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A8MUT6,C9JCP6 | ||
|association_with_transcript=-86bp_to_ENST00000392380,ENST00000456699,ENST00000486877_5end | |association_with_transcript=-86bp_to_ENST00000392380,ENST00000456699,ENST00000486877_5end | ||
|cluster_id=chr3:197024690..197024740,- | |cluster_id=chr3:197024690..197024740,- | ||
Latest revision as of 16:50, 17 September 2015
| Short description: | p4@DLG1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_DLG1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -86bp_to_ENST00000392380, ENST00000456699, ENST00000486877_5end |
| EntrezGene: | DLG1 |
| HGNC: | 2900 |
| UniProt: | A8MUT6C9JCP6 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@DLG1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endo-epithelial cell | 1.77e-07 | 42 |
| endodermal cell | 5.51e-07 | 58 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.88e-20 | 56 |
| neural rod | 2.88e-20 | 56 |
| future spinal cord | 2.88e-20 | 56 |
| neural keel | 2.88e-20 | 56 |
| neural plate | 1.58e-19 | 82 |
| presumptive neural plate | 1.58e-19 | 82 |
| brain | 2.44e-19 | 68 |
| future brain | 2.44e-19 | 68 |
| ecto-epithelium | 2.69e-19 | 104 |
| ectoderm-derived structure | 8.56e-19 | 171 |
Showing 1 to 10 of 38 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 2.31e-07 | 14 |
Showing 1 to 1 of 1 entries
