FFCP PHASE1:Mm9::chr6:34730836..34730905,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:34730836..34730905,+
|short_description=p2@Agbl3
|description=CAGE_peak_2_at_Agbl3_5end
|association_with_transcript=0bp_to_ENSMUST00000115009,ENSMUST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76223 | |EntrezGene=76223 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z4P1,Q8CDP0,D6RI59 | |UniProt=D3Z4P1,Q8CDP0,D6RI59 | ||
|association_with_transcript=0bp_to_ENSMUST00000115009,ENSMUST00000115012,ENSMUST00000115014,ENSMUST00000148834,ENSMUST00000155726,ENSMUST00000155890_5end | |||
|cluster_id=chr6:34730836..34730905,+ | |||
|description=CAGE_peak_2_at_Agbl3_5end | |||
|id=chr6:34730836..34730905,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!6.17e-12!122;UBERON:0000025!4.50e-10!114;UBERON:0000955!3.29e-09!50;UBERON:0006238!3.29e-09!50;UBERON:0001049!3.92e-09!52;UBERON:0005068!3.92e-09!52;UBERON:0006241!3.92e-09!52;UBERON:0007135!3.92e-09!52;UBERON:0002616!7.94e-09!49;UBERON:0000033!2.43e-08!63;UBERON:0007023!3.91e-07!51;UBERON:0000477!8.67e-07!154;UBERON:0001017!9.18e-07!73;UBERON:0005743!9.18e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.11e-12,122;UBERON:0000073,1.54e-10,54;UBERON:0000025,2.50e-10,114;UBERON:0001049,8.97e-10,52;UBERON:0005068,8.97e-10,52;UBERON:0006241,8.97e-10,52;UBERON:0007135,8.97e-10,52;UBERON:0000955,1.40e-08,47;UBERON:0006238,1.40e-08,47;UBERON:0002616,3.36e-08,46;UBERON:0001017,2.83e-07,73;UBERON:0007023,3.28e-07,51;UBERON:0010371,3.86e-07,73;UBERON:0002346,8.43e-07,64;UBERON:0003075,8.43e-07,64;UBERON:0007284,8.43e-07,64 | |||
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| ||
|short_description=p2@Agbl3 | |||
}} | }} |
Latest revision as of 02:30, 27 September 2015
Short description: | p2@Agbl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Agbl3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000115009, ENSMUST00000115012, ENSMUST00000115014, ENSMUST00000148834, ENSMUST00000155726, ENSMUST00000155890_5end |
EntrezGene: | Agbl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.11e-12 | 122 |
regional part of nervous system | 1.54e-10 | 54 |
tube | 2.50e-10 | 114 |
neural tube | 8.97e-10 | 52 |
neural rod | 8.97e-10 | 52 |
future spinal cord | 8.97e-10 | 52 |
neural keel | 8.97e-10 | 52 |
brain | 1.40e-08 | 47 |
future brain | 1.40e-08 | 47 |
regional part of brain | 3.36e-08 | 46 |
central nervous system | 2.83e-07 | 73 |
adult organism | 3.28e-07 | 51 |
ecto-epithelium | 3.86e-07 | 73 |
neurectoderm | 8.43e-07 | 64 |
neural plate | 8.43e-07 | 64 |
presumptive neural plate | 8.43e-07 | 64 |