FFCP PHASE1:Mm9::chr7:5013785..5013843,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:5013785..5013843,+
|short_description=p1@U2af2
|description=CAGE_peak_1_at_U2af2_5end
|association_with_transcript=1bp_to_uc009ezt.2,uc009ezu.2_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22185 | |EntrezGene=22185 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=301 | |||
|TSSclassifier=NA | |||
|UniProt=Q80XR5,P26369 | |UniProt=Q80XR5,P26369 | ||
|association_with_transcript=1bp_to_uc009ezt.2,uc009ezu.2_5end | |||
|cluster_id=chr7:5013785..5013843,+ | |||
|description=CAGE_peak_1_at_U2af2_5end | |||
|id=chr7:5013785..5013843,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.49e-15!32;CL:0002032!2.49e-15!32;CL:0000037!2.49e-15!32;CL:0000566!2.49e-15!32;CL:0000837!2.49e-15!32;CL:0000034!1.02e-12!97;CL:0002320!4.10e-12!46;CL:0000134!4.10e-12!46;CL:0000219!5.02e-12!54;CL:0002031!1.38e-11!25;CL:0000723!1.94e-10!91;CL:0000048!1.94e-10!91;CL:0000144!4.86e-10!121;CL:0000012!4.86e-10!121;CL:0000542!5.35e-09!13;CL:0000051!5.35e-09!13;CL:0000838!7.10e-09!12;CL:0002371!7.42e-09!118;CL:0000738!2.05e-08!17;CL:0002087!2.05e-08!17;CL:0000548!2.97e-08!115;CL:0000004!2.97e-08!115;CL:0000255!2.97e-08!115;CL:0000084!3.36e-08!11;CL:0000827!3.36e-08!11;CL:0000063!4.54e-08!66;CL:0000049!9.53e-08!19;CL:0000791!2.43e-07!9;CL:0000789!2.43e-07!9;CL:0002420!2.43e-07!9;CL:0002419!2.43e-07!9;CL:0000790!2.43e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-15,32;CL:0002032,2.49e-15,32;CL:0000037,2.49e-15,32;CL:0000837,2.49e-15,32;CL:0000034,1.02e-12,97;CL:0002320,4.10e-12,46;CL:0000134,4.10e-12,46;CL:0000219,5.02e-12,54;CL:0002031,1.38e-11,25;CL:0000723,1.94e-10,91;CL:0000048,1.94e-10,91;CL:0000542,5.35e-09,13;CL:0000051,5.35e-09,13;CL:0000838,7.10e-09,12;CL:0000738,2.05e-08,17;CL:0002087,2.05e-08,17;CL:0000084,3.36e-08,11;CL:0000827,3.36e-08,11;CL:0000049,9.53e-08,19;CL:0000791,2.43e-07,9;CL:0000789,2.43e-07,9;CL:0002420,2.43e-07,9;CL:0002419,2.43e-07,9;CL:0000790,2.43e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.05e-14!45;UBERON:0003061!2.05e-14!45;UBERON:0002193!1.14e-13!48;UBERON:0002384!4.10e-12!46;UBERON:0004177!1.96e-09!29;UBERON:0002370!3.71e-08!23;UBERON:0000974!3.71e-08!23;UBERON:0004807!3.71e-08!23;UBERON:0005058!3.71e-08!23;UBERON:0003351!3.71e-08!23;UBERON:0009113!3.71e-08!23;UBERON:0003295!3.71e-08!23;UBERON:0009722!3.71e-08!23;UBERON:0005562!3.71e-08!23;UBERON:0007690!3.71e-08!23;UBERON:0002405!3.99e-08!70;UBERON:0006562!1.80e-07!24;UBERON:0001557!1.80e-07!24;UBERON:0001042!1.80e-07!24;UBERON:0008814!1.80e-07!24;UBERON:0009145!1.80e-07!24;UBERON:0003408!3.81e-07!24;UBERON:0000072!4.19e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.05e-14,45;UBERON:0003061,2.05e-14,45;UBERON:0002193,1.14e-13,48;UBERON:0002405,1.14e-13,48;UBERON:0002384,4.10e-12,46;UBERON:0004177,1.96e-09,29;UBERON:0005057,1.96e-09,29;UBERON:0002370,3.71e-08,23;UBERON:0000974,3.71e-08,23;UBERON:0004807,3.71e-08,23;UBERON:0005058,3.71e-08,23;UBERON:0003351,3.71e-08,23;UBERON:0009113,3.71e-08,23;UBERON:0003295,3.71e-08,23;UBERON:0009722,3.71e-08,23;UBERON:0005562,3.71e-08,23;UBERON:0007690,3.71e-08,23;UBERON:0006562,1.80e-07,24;UBERON:0001557,1.80e-07,24;UBERON:0001042,1.80e-07,24;UBERON:0008814,1.80e-07,24;UBERON:0009145,1.80e-07,24;UBERON:0000077,2.17e-07,35;UBERON:0003408,3.81e-07,24;UBERON:0000072,4.19e-07,27 | |||
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| ||
|short_description=p1@U2af2 | |||
}} | }} |
Latest revision as of 18:18, 26 September 2015
Short description: | p1@U2af2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_U2af2_5end |
Coexpression cluster: | MCL_coexpression_mm9:301 |
Association with transcript: | 1bp_to_uc009ezt.2, uc009ezu.2_5end |
EntrezGene: | U2af2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.49e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.49e-15 | 32 |
hematopoietic stem cell | 2.49e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.49e-15 | 32 |
stem cell | 1.02e-12 | 97 |
connective tissue cell | 4.10e-12 | 46 |
mesenchymal cell | 4.10e-12 | 46 |
motile cell | 5.02e-12 | 54 |
hematopoietic lineage restricted progenitor cell | 1.38e-11 | 25 |
somatic stem cell | 1.94e-10 | 91 |
multi fate stem cell | 1.94e-10 | 91 |
lymphocyte | 5.35e-09 | 13 |
common lymphoid progenitor | 5.35e-09 | 13 |
lymphoid lineage restricted progenitor cell | 7.10e-09 | 12 |
leukocyte | 2.05e-08 | 17 |
nongranular leukocyte | 2.05e-08 | 17 |
T cell | 3.36e-08 | 11 |
pro-T cell | 3.36e-08 | 11 |
common myeloid progenitor | 9.53e-08 | 19 |
mature alpha-beta T cell | 2.43e-07 | 9 |
alpha-beta T cell | 2.43e-07 | 9 |
immature T cell | 2.43e-07 | 9 |
mature T cell | 2.43e-07 | 9 |
immature alpha-beta T cell | 2.43e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.05e-14 | 45 |
blood island | 2.05e-14 | 45 |
hemolymphoid system | 1.14e-13 | 48 |
immune system | 1.14e-13 | 48 |
connective tissue | 4.10e-12 | 46 |
hemopoietic organ | 1.96e-09 | 29 |
immune organ | 1.96e-09 | 29 |
thymus | 3.71e-08 | 23 |
neck | 3.71e-08 | 23 |
respiratory system epithelium | 3.71e-08 | 23 |
hemolymphoid system gland | 3.71e-08 | 23 |
pharyngeal epithelium | 3.71e-08 | 23 |
thymic region | 3.71e-08 | 23 |
pharyngeal gland | 3.71e-08 | 23 |
entire pharyngeal arch endoderm | 3.71e-08 | 23 |
thymus primordium | 3.71e-08 | 23 |
early pharyngeal endoderm | 3.71e-08 | 23 |
pharynx | 1.80e-07 | 24 |
upper respiratory tract | 1.80e-07 | 24 |
chordate pharynx | 1.80e-07 | 24 |
pharyngeal arch system | 1.80e-07 | 24 |
pharyngeal region of foregut | 1.80e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 2.17e-07 | 35 |
gland of gut | 3.81e-07 | 24 |
segment of respiratory tract | 4.19e-07 | 27 |