FFCP PHASE1:Mm9::chr7:56559450..56559489,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:56559450..56559489,+
|short_description=p6@Nav2
|description=CAGE_peak_6_at_Nav2_5end
|association_with_transcript=-18bp_to_ENSMUST00000107611,uc009hbi.1,u...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=78286 | |EntrezGene=78286 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q3Z7 | |UniProt=E9Q3Z7 | ||
|association_with_transcript=-18bp_to_ENSMUST00000107611,uc009hbi.1,uc009hbj.1_5end | |||
|cluster_id=chr7:56559450..56559489,+ | |||
|description=CAGE_peak_6_at_Nav2_5end | |||
|id=chr7:56559450..56559489,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!1.27e-14!57;UBERON:0003886!2.02e-12!38;UBERON:0002323!9.96e-12!37;UBERON:0004458!9.96e-12!37;UBERON:0002553!1.15e-11!39;UBERON:0000991!1.65e-08!18;UBERON:0005564!1.65e-08!18;UBERON:0000466!3.42e-08!79;UBERON:0005156!3.66e-08!26;UBERON:0000990!3.66e-08!26;UBERON:0004176!7.60e-08!17;UBERON:0009196!7.60e-08!17;UBERON:0009117!7.60e-08!17;UBERON:0004921!8.89e-08!126;UBERON:0004185!8.89e-08!126;UBERON:0005409!1.95e-07!59;UBERON:0003101!2.89e-07!16;UBERON:0000079!2.89e-07!16;UBERON:0001007!3.14e-07!128;UBERON:0001555!3.14e-07!128;UBERON:0007026!3.14e-07!128;UBERON:0003133!4.14e-07!24;UBERON:0003135!8.23e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,9.07e-20,38;UBERON:0002553,4.77e-19,39;UBERON:0002323,1.78e-18,37;UBERON:0004458,1.78e-18,37;UBERON:0005156,6.15e-15,26;UBERON:0000990,6.15e-15,26;UBERON:0000991,8.79e-14,18;UBERON:0005564,8.79e-14,18;UBERON:0003133,7.41e-13,24;UBERON:0004176,1.62e-12,17;UBERON:0009196,1.62e-12,17;UBERON:0009117,1.62e-12,17;UBERON:0003101,2.08e-11,16;UBERON:0000079,2.08e-11,16;UBERON:0003135,1.55e-10,15;UBERON:0001264,5.16e-10,12;UBERON:0000473,3.07e-09,14 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0.157731082679119,0.137114433605739,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,1.1554064790051,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0.270011876663381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,0.29688427812965,0,0.608930956624282,0,0.301445281105245,1.29347577849275,0.251333182659351,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,2.03678727700633,4.10543003013307,10.6143558542143,0.210441855886474,0.650602214813519,0,0.900310649026746,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0.215567992932842,0.756424320671277,0.879755620819744,0.43839146485515,1.94633074457919,0.696504333044333,0.61734640922383,4.77682240364384,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0.264450566663544,2.34617075588757,4.87697010906921,2.57734922644187,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,0.58489226135736,0.898819408654221,0,0.199141273254367,0.758671603812327,2.28497025219458,6.76246414038483,1.4255592949172,1.35766741017338,1.96380295692892,0.69560190836683,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,3.51031061316549,0.37898282354097,0.488894929326078,0.678980343100753,0.469380496577004,1.34005005953453,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,1.2756381492599,2.62181303545181,2.59027472798843,2.16973587872267,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,2.83880170416537,2.67098405500883,3.74640006513225,6.10389454998381,1.32745138339963,4.61283208694465,3.32555912661226,2.45186603682668,2.36241514304618,2.76691633149535,0.775284879504663,3.63533729477506,2.85197902707777,1.8962205476149,0,3.09406629744561,0.340439605753788,0.540183282093931,0.517434735131018,1.07168517515796,1.06404140185364,1.24858172321449,1.64549020602121,0.608929898229199,0,0,1.54369878638473,0.65954501176592,1.61464426695906,1.26657142349127,0.835606408021955,0.492422699235184,0.582961673259701,0,0,0.619160603889667,1.29636169158798,0.376736914009382,0.27338845544205,0,0.169978429993855,0,0,0.954670618015114,3.79603192297362,1.82987520414164,1.18805874903981,0.836353184057875,0.655087691238533,0.809186078308924,0.578574190077352,0,0.259229946583586,0,0,5.23307911153926,3.14371131868485,3.50012139019286,2.58319646955462,3.21016638432478,6.68936260280798,6.64042362704146,3.8797957437513,0.241584120826006,0.288030006257865,0.948033361884535,7.9062833963164,6.88163413004343,3.11809975146708,2.8644271306797,1.39076948346885,1.44234539423963,1.47689527174577,1.31256384932592,1.21930890648,0.504130925684203,0.487289403698762,0.481059208201647,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0,4.57879060668163,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,1.23621034343337,0.320919209591815,0.505394423527595,0.760437899670719,0.754505365544305,0.842773567228942,0.640251524048693,1.32101578597911,0.476293691283074,0.695305955669133,0.77163688185482,0,0.441596760403192,0,0,0.476872379894642,0.581385666529314,0.752875043322645,0.930760686808441,0.914639864363863,1.31534855718921,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,1.08455788830176,0.578719832943424,0.749431733813838,0.233931608445408,1.50409737833809,0.57386499620653,0.441182838239031,0.463735671240843 | |phase1_expression=0.80074423552397,0,0,0,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,0,0.157731082679119,0.137114433605739,0,1.19060606211498,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,1.1554064790051,0.997407872150954,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0.335565212115473,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0.270011876663381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0,0.258937883647172,0.29688427812965,0,0.608930956624282,0,0.301445281105245,1.29347577849275,0.251333182659351,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0,1.86391761218122,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,2.03678727700633,4.10543003013307,10.6143558542143,0.210441855886474,0.650602214813519,0,0.900310649026746,0.150704817835715,0.272145996605311,0.12811372028485,0.281105173679186,0,0.215567992932842,0.756424320671277,0.879755620819744,0.43839146485515,1.94633074457919,0.696504333044333,0.61734640922383,4.77682240364384,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0,0.329119699826961,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0.264450566663544,2.34617075588757,4.87697010906921,2.57734922644187,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.494096864172033,0.754005626400808,0.994782360205754,0.58489226135736,0.898819408654221,0,0.199141273254367,0.758671603812327,2.28497025219458,6.76246414038483,1.4255592949172,1.35766741017338,1.96380295692892,0.69560190836683,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,3.51031061316549,0.37898282354097,0.488894929326078,0.678980343100753,0.469380496577004,1.34005005953453,0.476087281772027,0.585400943573396,0.630540576424764,0.664394068946325,1.2756381492599,2.62181303545181,2.59027472798843,2.16973587872267,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,2.83880170416537,2.67098405500883,3.74640006513225,6.10389454998381,1.32745138339963,4.61283208694465,3.32555912661226,2.45186603682668,2.36241514304618,2.76691633149535,0.775284879504663,3.63533729477506,2.85197902707777,1.8962205476149,0,3.09406629744561,0.340439605753788,0.540183282093931,0.517434735131018,1.07168517515796,1.06404140185364,1.24858172321449,1.64549020602121,0.608929898229199,0,0,1.54369878638473,0.65954501176592,1.61464426695906,1.26657142349127,0.835606408021955,0.492422699235184,0.582961673259701,0,0,0.619160603889667,1.29636169158798,0.376736914009382,0.27338845544205,0,0.169978429993855,0,0,0.954670618015114,3.79603192297362,1.82987520414164,1.18805874903981,0.836353184057875,0.655087691238533,0.809186078308924,0.578574190077352,0,0.259229946583586,0,0,5.23307911153926,3.14371131868485,3.50012139019286,2.58319646955462,3.21016638432478,6.68936260280798,6.64042362704146,3.8797957437513,0.241584120826006,0.288030006257865,0.948033361884535,7.9062833963164,6.88163413004343,3.11809975146708,2.8644271306797,1.39076948346885,1.44234539423963,1.47689527174577,1.31256384932592,1.21930890648,0.504130925684203,0.487289403698762,0.481059208201647,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0,4.57879060668163,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0.341467211508268,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,1.23621034343337,0.320919209591815,0.505394423527595,0.760437899670719,0.754505365544305,0.842773567228942,0.640251524048693,1.32101578597911,0.476293691283074,0.695305955669133,0.77163688185482,0,0.441596760403192,0,0,0.476872379894642,0.581385666529314,0.752875043322645,0.930760686808441,0.914639864363863,1.31534855718921,0.135804113845862,0.561142271657738,0.474540072496697,0.29551344712669,0.409231043169689,1.08455788830176,0.578719832943424,0.749431733813838,0.233931608445408,1.50409737833809,0.57386499620653,0.441182838239031,0.463735671240843 | ||
|short_description=p6@Nav2 | |||
}} | }} |
Latest revision as of 23:06, 26 September 2015
Short description: | p6@Nav2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nav2_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENSMUST00000107611, uc009hbi.1, uc009hbj.1_5end |
EntrezGene: | Nav2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 9.07e-20 | 38 |
anatomical cavity | 4.77e-19 | 39 |
body cavity | 1.78e-18 | 37 |
body cavity or lining | 1.78e-18 | 37 |
reproductive structure | 6.15e-15 | 26 |
reproductive system | 6.15e-15 | 26 |
gonad | 8.79e-14 | 18 |
gonad primordium | 8.79e-14 | 18 |
reproductive organ | 7.41e-13 | 24 |
external genitalia | 1.62e-12 | 17 |
indifferent external genitalia | 1.62e-12 | 17 |
indifferent gonad | 1.62e-12 | 17 |
male organism | 2.08e-11 | 16 |
male reproductive system | 2.08e-11 | 16 |
male reproductive organ | 1.55e-10 | 15 |
pancreas | 5.16e-10 | 12 |
testis | 3.07e-09 | 14 |