FFCP PHASE1:Mm9::chr8:11758380..11758412,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:11758380..11758412,+
|short_description=p2@Arhgef7
|description=CAGE_peak_2_at_Arhgef7_5end
|association_with_transcript=26bp_to_ENSMUST00000074856,ENSMUST...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54126 | |EntrezGene=54126 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9ES28 | |UniProt=Q9ES28 | ||
|association_with_transcript=26bp_to_ENSMUST00000074856,ENSMUST00000098938_5end | |||
|cluster_id=chr8:11758380..11758412,+ | |||
|description=CAGE_peak_2_at_Arhgef7_5end | |||
|id=chr8:11758380..11758412,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.40e-08!17;CL:0002087!5.40e-08!17;CL:0000988!1.11e-07!32;CL:0002032!1.11e-07!32;CL:0000037!1.11e-07!32;CL:0000566!1.11e-07!32;CL:0000837!1.11e-07!32;CL:0000542!1.25e-07!13;CL:0000051!1.25e-07!13;CL:0000838!1.85e-07!12;CL:0000084!4.40e-07!11;CL:0000827!4.40e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.40e-08,17;CL:0002087,5.40e-08,17;CL:0000988,1.12e-07,32;CL:0002032,1.12e-07,32;CL:0000037,1.12e-07,32;CL:0000837,1.12e-07,32;CL:0000542,1.25e-07,13;CL:0000051,1.25e-07,13;CL:0000838,1.85e-07,12;CL:0000084,4.40e-07,11;CL:0000827,4.40e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.71e-11!48;UBERON:0000065!4.51e-10!41;UBERON:0001004!1.16e-09!42;UBERON:0002390!1.36e-09!45;UBERON:0003061!1.36e-09!45;UBERON:0002370!4.72e-09!23;UBERON:0000974!4.72e-09!23;UBERON:0004807!4.72e-09!23;UBERON:0005058!4.72e-09!23;UBERON:0003351!4.72e-09!23;UBERON:0009113!4.72e-09!23;UBERON:0003295!4.72e-09!23;UBERON:0009722!4.72e-09!23;UBERON:0005562!4.72e-09!23;UBERON:0007690!4.72e-09!23;UBERON:0003408!1.75e-08!24;UBERON:0006562!2.25e-08!24;UBERON:0001557!2.25e-08!24;UBERON:0001042!2.25e-08!24;UBERON:0008814!2.25e-08!24;UBERON:0009145!2.25e-08!24;UBERON:0000063!4.38e-08!35;UBERON:0000072!1.39e-07!27;UBERON:0004177!5.99e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.78e-11,48;UBERON:0002405,3.78e-11,48;UBERON:0000065,4.51e-10,41;UBERON:0001004,1.16e-09,42;UBERON:0002390,1.39e-09,45;UBERON:0003061,1.39e-09,45;UBERON:0002370,4.72e-09,23;UBERON:0000974,4.72e-09,23;UBERON:0004807,4.72e-09,23;UBERON:0005058,4.72e-09,23;UBERON:0003351,4.72e-09,23;UBERON:0009113,4.72e-09,23;UBERON:0003295,4.72e-09,23;UBERON:0009722,4.72e-09,23;UBERON:0005562,4.72e-09,23;UBERON:0007690,4.72e-09,23;UBERON:0003408,1.75e-08,24;UBERON:0006562,2.25e-08,24;UBERON:0001557,2.25e-08,24;UBERON:0001042,2.25e-08,24;UBERON:0008814,2.25e-08,24;UBERON:0009145,2.25e-08,24;UBERON:0000072,1.39e-07,27;UBERON:0000077,2.52e-07,35;UBERON:0004177,5.99e-07,29;UBERON:0005057,5.99e-07,29 | |||
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| ||
|short_description=p2@Arhgef7 | |||
}} | }} |
Latest revision as of 13:42, 1 October 2015
Short description: | p2@Arhgef7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgef7_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENSMUST00000074856, ENSMUST00000098938_5end |
EntrezGene: | Arhgef7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.40e-08 | 17 |
nongranular leukocyte | 5.40e-08 | 17 |
hematopoietic cell | 1.12e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.12e-07 | 32 |
hematopoietic stem cell | 1.12e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.12e-07 | 32 |
lymphocyte | 1.25e-07 | 13 |
common lymphoid progenitor | 1.25e-07 | 13 |
lymphoid lineage restricted progenitor cell | 1.85e-07 | 12 |
T cell | 4.40e-07 | 11 |
pro-T cell | 4.40e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.78e-11 | 48 |
immune system | 3.78e-11 | 48 |
respiratory tract | 4.51e-10 | 41 |
respiratory system | 1.16e-09 | 42 |
hematopoietic system | 1.39e-09 | 45 |
blood island | 1.39e-09 | 45 |
thymus | 4.72e-09 | 23 |
neck | 4.72e-09 | 23 |
respiratory system epithelium | 4.72e-09 | 23 |
hemolymphoid system gland | 4.72e-09 | 23 |
pharyngeal epithelium | 4.72e-09 | 23 |
thymic region | 4.72e-09 | 23 |
pharyngeal gland | 4.72e-09 | 23 |
entire pharyngeal arch endoderm | 4.72e-09 | 23 |
thymus primordium | 4.72e-09 | 23 |
early pharyngeal endoderm | 4.72e-09 | 23 |
gland of gut | 1.75e-08 | 24 |
pharynx | 2.25e-08 | 24 |
upper respiratory tract | 2.25e-08 | 24 |
chordate pharynx | 2.25e-08 | 24 |
pharyngeal arch system | 2.25e-08 | 24 |
pharyngeal region of foregut | 2.25e-08 | 24 |
segment of respiratory tract | 1.39e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 2.52e-07 | 35 |
hemopoietic organ | 5.99e-07 | 29 |
immune organ | 5.99e-07 | 29 |