FFCP PHASE1:Mm9::chr9:121905215..121905233,+: Difference between revisions
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|id=chr9:121905215..121905233,+
|short_description=p@chr9:121905215..121905233,+
|description=CAGE_peak_at_chr9:121905215..121905233,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=334 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:121905215..121905233,+ | |||
|description=CAGE_peak_at_chr9:121905215..121905233,+ | |||
|id=chr9:121905215..121905233,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.62e-13!23;CL:0000337!5.62e-13!23;CL:0000540!1.15e-08!33;CL:0000047!1.15e-08!33;CL:0000031!1.15e-08!33;CL:0000404!1.15e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.09e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.11e-20!50;UBERON:0006238!1.11e-20!50;UBERON:0001049!5.18e-20!52;UBERON:0005068!5.18e-20!52;UBERON:0006241!5.18e-20!52;UBERON:0007135!5.18e-20!52;UBERON:0001017!7.15e-20!73;UBERON:0005743!7.15e-20!73;UBERON:0002616!1.23e-19!49;UBERON:0000073!5.08e-19!75;UBERON:0001016!5.08e-19!75;UBERON:0000033!2.49e-15!63;UBERON:0003080!4.80e-15!40;UBERON:0002020!3.34e-14!34;UBERON:0002780!6.37e-14!39;UBERON:0001890!6.37e-14!39;UBERON:0006240!6.37e-14!39;UBERON:0002346!7.23e-14!71;UBERON:0003075!7.23e-14!71;UBERON:0007284!7.23e-14!71;UBERON:0003056!7.81e-12!49;UBERON:0002791!9.94e-12!29;UBERON:0003528!9.94e-12!29;UBERON:0001893!9.94e-12!29;UBERON:0004121!1.33e-11!102;UBERON:0000924!1.33e-11!102;UBERON:0006601!1.33e-11!102;UBERON:0007811!2.22e-09!86;UBERON:0002420!1.85e-08!8;UBERON:0007245!1.85e-08!8;UBERON:0010009!1.85e-08!8;UBERON:0010011!1.85e-08!8;UBERON:0000454!1.85e-08!8;UBERON:0000153!8.39e-08!94;UBERON:0000369!1.13e-07!5;UBERON:0002435!1.13e-07!5;UBERON:0000204!1.13e-07!5;UBERON:0010082!1.13e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.54e-16,5;UBERON:0002435,1.54e-16,5;UBERON:0000204,1.54e-16,5;UBERON:0010082,1.54e-16,5;UBERON:0004684,1.09e-12,3;UBERON:0002275,1.09e-12,3;UBERON:0002420,1.39e-10,8;UBERON:0007245,1.39e-10,8;UBERON:0010009,1.39e-10,8;UBERON:0010011,1.39e-10,8;UBERON:0000454,1.39e-10,8;UBERON:0002259,2.01e-10,1;UBERON:0002314,2.01e-10,1;UBERON:0004061,2.01e-10,1;UBERON:0006777,2.01e-10,1;UBERON:0005882,2.01e-10,1;UBERON:0000073,4.27e-10,54;UBERON:0001851,4.59e-10,1;UBERON:0005889,4.59e-10,1;UBERON:0001017,2.42e-07,73;UBERON:0001016,3.93e-07,75;UBERON:0002616,8.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.405017814995072,0,0,0.441737081903227,0.734944795289724,0.479227355091182,0,2.20231761998777,0.638436690425939,1.0752457327937,0.395658863190582,1.00636407962651,0.52091337055676,0.837548997004143,0,0.45839474333043,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,2.54644086988199,1.83000241127451,8.41884159156192,0.869121600961382,1.27857728665165,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.937693492737625,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,1.01391719956096,0.188626341386076,0.280924522409647,0.512201219238954,0.516919220600519,0,0,0.192909220463705,0,0.588795680537589,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0.935726433781634,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0.405017814995072,0,0,0.441737081903227,0.734944795289724,0.479227355091182,0,2.20231761998777,0.638436690425939,1.0752457327937,0.395658863190582,1.00636407962651,0.52091337055676,0.837548997004143,0,0.45839474333043,0.589257170947335,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,2.54644086988199,1.83000241127451,8.41884159156192,0.869121600961382,1.27857728665165,0.83115217823824,0.486723789203273,0,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,0.937693492737625,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0.252697211763798,1.01391719956096,0.188626341386076,0.280924522409647,0.512201219238954,0.516919220600519,0,0,0.192909220463705,0,0.588795680537589,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.423073039458382,0.365855945745545,0.263069711437843,0.679020569229309,0.561142271657738,0,0.394017929502254,0.818462086339379,0.154936841185966,0.192906610981141,0.249810577937946,0.935726433781634,0.214871054048298,0,0,0 | ||
|short_description=p@chr9:121905215..121905233,+ | |||
}} | }} |
Latest revision as of 18:43, 4 August 2015
Short description: | p@chr9:121905215..121905233, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:121905215..121905233, + |
Coexpression cluster: | MCL_coexpression_mm9:334 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.09e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.54e-16 | 5 |
striatum | 1.54e-16 | 5 |
ventral part of telencephalon | 1.54e-16 | 5 |
future corpus striatum | 1.54e-16 | 5 |
raphe nuclei | 1.09e-12 | 3 |
reticular formation | 1.09e-12 | 3 |
basal ganglion | 1.39e-10 | 8 |
nuclear complex of neuraxis | 1.39e-10 | 8 |
aggregate regional part of brain | 1.39e-10 | 8 |
collection of basal ganglia | 1.39e-10 | 8 |
cerebral subcortex | 1.39e-10 | 8 |
corpora quadrigemina | 2.01e-10 | 1 |
midbrain tectum | 2.01e-10 | 1 |
neural tube mantle layer | 2.01e-10 | 1 |
tectal plate | 2.01e-10 | 1 |
neural tube alar plate | 2.01e-10 | 1 |
regional part of nervous system | 4.27e-10 | 54 |
cortex | 4.59e-10 | 1 |
zygote cortex | 4.59e-10 | 1 |
central nervous system | 2.42e-07 | 73 |
nervous system | 3.93e-07 | 75 |
regional part of brain | 8.30e-07 | 46 |