FFCP PHASE1:Hg19::chr10:112632685..112632730,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:112632685..112632730,+ to FFCP PHASE1:Hg19::chr10:112632685..112632730,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27250 | |EntrezGene=27250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8763 | |HGNC=8763 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=132bp_to_BX537500_5end | |||
|cluster_id=chr10:112632685..112632730,+ | |||
|coexpression_cluster_id=C1295 | |||
|description=CAGE_peak_6_at_PDCD4_5end | |||
|id=chr10:112632685..112632730,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.05e-45!172;CL:0000566!2.05e-45!172;CL:0000988!2.38e-44!182;CL:0000738!7.29e-43!140;CL:0002032!5.17e-42!165;CL:0000837!5.17e-42!165;CL:0002031!9.03e-36!124;CL:0002087!1.65e-34!119;CL:0000766!8.93e-27!76;CL:0000763!2.65e-26!112;CL:0000049!2.65e-26!112;CL:0000860!1.08e-24!45;CL:0002057!5.49e-23!42;CL:0000839!3.50e-22!70;CL:0000557!2.76e-21!71;CL:0002194!2.56e-18!63;CL:0000576!2.56e-18!63;CL:0000040!2.56e-18!63;CL:0000559!2.56e-18!63;CL:0002009!4.60e-18!65;CL:0000542!5.34e-14!53;CL:0000051!5.34e-14!53;CL:0000838!2.16e-13!52;CL:0000134!2.36e-09!358;CL:0000084!4.22e-09!25;CL:0000827!4.22e-09!25;CL:0000791!1.38e-08!18;CL:0000789!1.38e-08!18;CL:0002420!1.38e-08!18;CL:0002419!1.38e-08!18;CL:0000790!1.38e-08!18;CL:0000219!2.13e-08!390;CL:0002320!2.44e-08!365;CL:0000094!7.98e-08!8;CL:0000081!2.46e-07!11;CL:0002393!3.03e-07!9;CL:0002397!3.03e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.37e-20;33!CL:0002057;7.37e-20;33!CL:0000576;1.55e-18;48!CL:0000766;3.11e-18;69!CL:0000791;5.40e-18;18!CL:0000789;5.40e-18;18!CL:0002419;5.40e-18;18!CL:0000084;2.42e-17;25!CL:0002087;1.95e-15;104!CL:0000094;1.27e-14;8!CL:0000473;1.81e-13;39!CL:0000234;1.81e-13;39!CL:0000081;6.85e-13;11!CL:0000738;2.00e-11;136!CL:0000624;9.51e-11;6!CL:0000625;1.32e-10;11!CL:0000542;5.75e-10;53!CL:0000988;3.00e-09;177!CL:0002393;3.42e-09;6!CL:0002397;3.42e-09;6!CL:0000763;8.01e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.14e-60,136;CL:0000988,3.11e-56,177;CL:0000037,4.28e-55,168;CL:0002032,5.46e-50,161;CL:0000837,5.46e-50,161;CL:0002031,2.95e-46,120;CL:0002087,5.34e-46,115;CL:0000766,8.40e-38,72;CL:0000860,3.88e-33,42;CL:0002057,3.88e-33,42;CL:0000763,2.14e-29,108;CL:0000049,2.14e-29,108;CL:0000839,3.27e-29,66;CL:0000473,1.13e-27,48;CL:0000234,1.13e-27,48;CL:0000557,7.02e-27,67;CL:0002194,2.37e-23,59;CL:0000576,2.37e-23,59;CL:0000040,2.37e-23,59;CL:0000559,2.37e-23,59;CL:0002009,2.99e-22,61;CL:0000791,2.24e-18,18;CL:0000789,2.24e-18,18;CL:0002420,2.24e-18,18;CL:0002419,2.24e-18,18;CL:0000790,2.24e-18,18;CL:0000542,2.52e-18,53;CL:0000051,2.52e-18,53;CL:0000084,1.41e-17,25;CL:0000827,1.41e-17,25;CL:0000838,3.16e-17,52;CL:0000094,9.44e-15,8;CL:0000134,1.19e-14,354;CL:0002320,6.39e-14,361;CL:0002393,1.55e-13,9;CL:0002397,1.55e-13,9;CL:0000081,5.30e-13,11;CL:0000219,2.22e-11,386;CL:0000625,6.62e-11,11;CL:0000624,7.76e-11,6;CL:0000034,9.47e-09,441;CL:0000048,2.28e-08,427;CL:0000723,5.77e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.09e-23;42!CL:0000790;5.40e-18;18!CL:0000051;5.75e-10;53!CL:0000049;5.63e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.35e-24!102;UBERON:0003061!5.35e-24!102;UBERON:0002193!3.39e-21!112;UBERON:0002371!1.01e-18!80;UBERON:0001474!1.57e-18!86;UBERON:0002405!5.12e-14!115;UBERON:0004765!1.29e-13!101;UBERON:0001434!1.29e-13!101;UBERON:0002384!1.19e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.02e-29,98;UBERON:0003061,1.02e-29,98;UBERON:0002193,1.51e-25,108;UBERON:0002371,1.45e-23,76;UBERON:0001474,5.69e-21,82;UBERON:0002405,1.59e-19,93;UBERON:0004765,4.56e-18,90;UBERON:0001434,4.03e-15,100;UBERON:0002384,6.26e-13,371;UBERON:0000178,2.34e-07,15;UBERON:0000179,2.34e-07,15;UBERON:0000463,2.34e-07,15;UBERON:0003081,3.02e-07,203 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.687720651731561,0.57470412614962,0.865818594450472,4.72037132218685,6.52509976765262,2.78669021968937,0,0,0,0.697204805222715,3.9807385096478,0.880801318004542,4.9859586767869,2.00544447470142,2.38711957787437,0,0,0.257575567634187,0.145398238779565,0.755751887377619,0.485168122375632,0.697287110717054,2.46700732813095,1.85823822537062,2.01384674625505,1.0246428261164,1.41889337933151,1.72372840368309,1.93645405075148,1.35426486594342,1.12945403725563,3.0019676506363,1.79778787556068,4.89734227793444,7.38136762275015,5.11469700639233,0,1.19678194572979,0.852449501065388,2.03146467040009,0.56738522469114,1.24564449799115,2.76373531782418,3.12889751052121,5.42972111762792,0.605399502633369,2.94622108790052,1.26584954976354,1.69004229049553,1.91343869968539,1.88692780957538,2.80821577866238,0.300353785683013,2.57160938715328,2.85012743741249,2.58591680358817,1.82664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,1.17447437874188,3.82273228125229,1.32171328579026,3.92355994087075,1.05353633910031,8.26181034478099,1.57204305099666,5.34563897398724,0.668745981562712,15.9701910650459,11.8361951433683,3.89653456815823,0.334231370655521,2.65145316727353,1.55073726208535,1.62482318259009,0.128091319725675,0.130059347559878,0.493313713811028,0.829050053357545,0.289803085735052,18.8323935215817,15.7849088572931,8.36284190439814,0.113309342697566,4.59864592322305,4.81078423675682,4.55435445635105,2.54852331459277,1.95325036156926,0,1.05402583354441,1.79181255616186,0,1.89421801635213,1.64225599384209,12.4996180799334,6.68600489458768,5.06885413589796,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,5.96226560763355,4.0039643754609,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,18.4492584410489,11.6334079244498,0,0.496971951695318,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.41968160047813,1.01150814046861,1.20505514941741,0.55146986366197,1.96091499683166,0.474541238222193,0.943819157121151,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0.16798212819886,0,2.14940454486836,1.16253575405585,0,2.95597942737566,0.704387472105808,1.86595303986695,2.01767934783746,2.01987893482208,0.317489471460845,0,0,0,0.205654985406647,0.901029173531752,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.179060963239896,0,9.06341496928865,2.37190332345469,3.59360501583295,0,0,0,0,0,11.2351053592077,2.99161459204025,10.7748033493369,0,0,0,0,0.356857977594324,0,0,0,0,0,1.99267679560631,0,0,0,0,3.51505644408909,4.09856981555372,1.70764092485511,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0.120859449591622,0,0.0920809889358963,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,2.3529190592241,0,0,0,0.103041011647722,0.183138929636687,0.41254749960294,0.574265537996172,0,0,0.386682873168488,0.154048617114644,0,0,0.322260734604821,0,0,0.356128142586949,0.165284915360978,0.960950336825531,0.127612712494584,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,1.19115887728894,0,0,0.540031437238115,0,0,0,0,3.90186667764009,0.28853842595289,0.426851060090485,0,0,0.191505370132367,0.635020748171649,3.57084134302011,0.280797178113459,0,1.88015874927628,5.01268954180134,0.338583555603207,0.1605880751037,0.201799707191048,0,0,0.921722292925374,0.894704431569664,1.83534055883099,0.976940477010201,0.278406173895242,0,0.540911356951966,0.33307196799782,0,0,0.586032717087576,0,0.334330152832435,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0.102268682502155,0.861593638227486,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0.962059999958153,0,0,0,0.472775363535873,0,0.291604613383254,0,0,0.361789315876224,0,0,0,0,9.04189247207618,0.557694977114413,0.230850775511391,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0.156980256395025,0.831058409500782,0,0,0.167821586975843,0,0.794682894901893,0,0,0.141353071433941,0,0,0.265372693510018,0.611030144933625,6.8199859596543,4.07760998523459,6.05647307131641,0.269604531922708,0,0,0.547364367646998,0,0,0.394584402849391,0,0,1.01098527405581,0.450970258243478,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0.51595809741485,1.06431964417994,2.33885814675794,1.47807822695777,0.38795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| ||
|short_description=p6@PDCD4 | |||
}} | }} |
Latest revision as of 09:21, 16 September 2015
Short description: | p6@PDCD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PDCD4_5end |
Coexpression cluster: | C1295_Eosinophils_CD4_CD14_Neutrophils_CD8_Basophils_Mast |
Association with transcript: | 132bp_to_BX537500_5end |
EntrezGene: | PDCD4 |
HGNC: | 8763 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.02e-29 | 98 |
blood island | 1.02e-29 | 98 |
hemolymphoid system | 1.51e-25 | 108 |
bone marrow | 1.45e-23 | 76 |
bone element | 5.69e-21 | 82 |
immune system | 1.59e-19 | 93 |
skeletal element | 4.56e-18 | 90 |
skeletal system | 4.03e-15 | 100 |
connective tissue | 6.26e-13 | 371 |
blood | 2.34e-07 | 15 |
haemolymphatic fluid | 2.34e-07 | 15 |
organism substance | 2.34e-07 | 15 |
lateral plate mesoderm | 3.02e-07 | 203 |