FFCP PHASE1:Hg19::chr11:2153605..2153619,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2153605..2153619,- to FFCP PHASE1:Hg19::chr11:2153605..2153619,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:2153605..2153619,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_at_chr11:2153605..2153619,- | |||
|id=chr11:2153605..2153619,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.52e-10;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.56e-10,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!1.49e-17!347;UBERON:0007023!4.66e-15!115;UBERON:0000468!1.26e-14!659;UBERON:0000119!5.78e-14!312;UBERON:0000475!1.20e-13!365;UBERON:0000483!2.39e-13!309;UBERON:0000922!3.19e-12!612;UBERON:0000062!3.28e-11!511;UBERON:0005631!1.39e-10!14;UBERON:0000158!1.39e-10!14;UBERON:0000064!1.88e-10!219;UBERON:0002050!2.53e-10!605;UBERON:0005423!2.53e-10!605;UBERON:0000923!5.50e-10!604;UBERON:0005291!5.50e-10!604;UBERON:0006598!5.50e-10!604;UBERON:0002532!5.50e-10!604;UBERON:0003075!6.42e-10!86;UBERON:0007284!6.42e-10!86;UBERON:0002616!1.75e-09!59;UBERON:0002346!3.57e-09!90;UBERON:0004119!4.07e-09!169;UBERON:0000925!4.07e-09!169;UBERON:0006595!4.07e-09!169;UBERON:0000477!5.78e-09!286;UBERON:0000467!5.92e-09!625;UBERON:0000480!8.47e-09!626;UBERON:0001049!1.95e-08!57;UBERON:0005068!1.95e-08!57;UBERON:0006241!1.95e-08!57;UBERON:0007135!1.95e-08!57;UBERON:0002100!2.11e-08!216;UBERON:0000955!2.82e-08!69;UBERON:0006238!2.82e-08!69;UBERON:0000153!3.95e-08!129;UBERON:0007811!3.95e-08!129;UBERON:0000033!9.44e-08!123;UBERON:0005743!1.37e-07!86;UBERON:0002417!1.40e-07!61;UBERON:0000916!1.40e-07!61;UBERON:0005256!1.53e-07!143;UBERON:0001008!1.61e-07!45;UBERON:0000478!1.81e-07!24;UBERON:0001017!1.99e-07!82;UBERON:0005177!2.04e-07!107;UBERON:0006554!2.48e-07!44;UBERON:0004111!5.77e-07!241;UBERON:0002107!9.08e-07!19;UBERON:0006925!9.08e-07!19;UBERON:0008836!9.08e-07!19;UBERON:0004121!9.29e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.13e-09;24!UBERON:0005631;3.67e-09;10!UBERON:0000158;3.67e-09;10!UBERON:0002107;2.13e-08;19!UBERON:0006925;2.13e-08;19!UBERON:0001134;3.35e-07;16!UBERON:0002036;3.35e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,5.90e-13,160;UBERON:0009142,5.90e-13,160;UBERON:0005631,1.94e-12,14;UBERON:0000158,1.94e-12,14;UBERON:0000119,3.11e-10,309;UBERON:0000478,1.15e-09,24;UBERON:0000483,1.18e-09,306;UBERON:0011216,1.70e-09,223;UBERON:0001008,1.87e-09,48;UBERON:0007023,2.56e-09,114;UBERON:0006554,3.17e-09,47;UBERON:0005256,3.80e-09,122;UBERON:0002107,2.36e-08,19;UBERON:0006925,2.36e-08,19;UBERON:0008836,2.36e-08,19;UBERON:0004119,6.32e-08,160;UBERON:0000925,6.32e-08,160;UBERON:0006595,6.32e-08,160;UBERON:0003124,2.27e-07,7;UBERON:0003064,6.62e-07,28;UBERON:0002417,8.26e-07,60;UBERON:0000916,8.26e-07,60;UBERON:0003929,8.55e-07,54 | |||
|phase1_expression=3.27021082687002,2.5692062866918,0.281908808191942,22.0161256376887,9.38618298297304,36.6382180122155,0,0,0.522371256399677,7.12628415854376,5.58240934377942,486.687377106024,370.592604410977,26.2384668275299,45.4014404747245,0,0,0,0,5.54044761345546,27.7440940092184,21.9418305034661,0,0.136874425072884,1.25542639594803,0,0,0,0,0,3.40595471295367,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.2786256184353,0,0,19.4094335407504,0,2.43317435151318,1.89069634328136,2.4390233720882,5.09441757020131,3.47094550068939,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,3.85165258716094,0,1.03366703667732,0,2.34304428935269,0,0,0,0,4.0507097394088,0.0892997282840798,0,0.225222960966644,0,0,1.46561395144326,0,0,2.61656431285521,0.496971951695318,0.12663051166458,0,0.286836620748814,0,3.36406560085384,2.1349799145941,0.74000264525148,1.24484414159907,0.269421344139376,0.326923806226917,38.2934291941676,74.9028701823999,5.38939293217732,0,0,0.149448680551801,0,0,0,0.204154171254893,3.4393608847295,0,11.8800285728205,35.3591708868336,0,0,3.36672227908132,1.62654075833553,0,0.877955241761676,0.612975591598039,2.70428506031874,2.7223723958405,0,3.63047560991565,0.423863802319124,0,0,0,0,0.168776332241266,0,0,0.276149695926898,6.7891343863901,0,0,1.69560592310488,0,0,0,0.487894824518382,0.265059536642971,29.7456493745967,21.5614994431971,13.1206842455327,0.72995471815166,0,0,0,195.034529773431,2.16563844500876,0,0,0,0,0,0,0,0.196221465125346,0,0,1.40241773803446,6.9967581926338,42.6325263018072,81.1232222859717,34.3989525837169,66.1684695483173,0,163.820600139427,0.514703430895577,0.219500570817251,0,0,11.4809671996577,2.6064664424826,0,4.3299402607582,6.4921026786043,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0.503946384596579,0,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,1.56983518083505,20.9260833039974,1.6134422880609,0,3.57656445851882,0,9.83971031364021,4.16029747645464,8.74505072491283,19.858878483259,10.656887160644,96.2241897319333,588.201820244324,40.3387765022577,0,44.4239935928182,19.7987968233357,0,0,0,0,0,0,0,0,0,9.84512885339539,20.7531085775887,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,76.6821823244624,63.0214856535193,45.8437890052553,89.4274704582471,62.6285750678038,51.0955824709948,49.7851013719031,0,0,20.694614258501,0,3.13427586520895,0.0868836144680828,488.132285554612,410.742678301594,0,0,0,46.681646002724,171.428502695812,311.7643924229,1.24053903909388,5.37116906508219,0.841980283299221,0.256278298511402,6.14048698880044,3.05622450172854,17.8101679733989,0,0,0,1.55776328755086,0,318.827228022699,1.60405176242628,3.13075362382048,11.5962592646253,16.2061139525978,19.0130401691165,1.35359883872224,15.5570980950918,0.784349769176855,0,2.95544560900052,4.54933536283586,1.36074964221213,14.2504504627412,13.880452742126,15.7148933775435,21.5726602757587,0,0,0.895499018888713,4.16593765627276,2.0914836081992,0,0.984043937099117,0.650756789328606,41.0103226357935,0.732555718546747,0.495056999523528,0,0,0,6.47693812557217,2.00263202249038,3.68408819342711,8.95937721149449,1.39646318328756,12.3264189827094,5.79541066429486,151.4434926351,6.61139661443912,2.69066094311149,0.765676274967505,2.6301023022443,1.39453664789186,1.25924938732256,0,0,0,0,0,0,7.07100901783368,23.7284568539044,12.2003324111248,1.79128453917934,44.9335937435616,0,0,18.5268631310814,3.84351841630477,3.06312246098785,0,0,0,28.7703906062858,0,0,28.664981395677,1.41405431953713,0,1.10273068709225,0,0,0,3.9353685122798,0,0,0,9.7519719498755,30.9484479191332,0,0.354761064070598,0,1.64647446479951,3.03578539012572,2.0996083214699,0,0,0,49.896214411693,37.453967422397,8.42357378338128,40.7955741253742,92.5785302834047,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,8.61611792633986,0,0,0,0,10.1090643697607,0,0,6.81926752335391,408.969302355663,139.870364672173,526.166282695985,4.97073823883149,0.140669416410513,0.111308705022906,0,16.4677818339835,11.556383318562,0.276283915531148,4.53478946137697,0,0,0,0,0,0,6.01724774385295,0,0,0.969332746095218,2.87581104301739,1.99613798001194,0,0,1.44999915086959,0,0.254253650292766,0.236387681767936,0.689486746482929,0,0,0,0.723578631752448,1.52581736317083,2.87506075821184,1.77328571372128,0.438770794307945,0,0,8.23367765990629,0,43.1154501205672,0,0,484.562761632786,22.8993983504656,1213.72018499443,0,0,0,0,0,0,0,0,0,0,17.8104870006765,0,0.995261931078505,0.442287822516696,10.9985426088053,0,0,0,5.93129970229958,292.940841264058,0.234264445725339,0,0.19566461893209,0,5.91876604274086,125.83034469061,5.50930970934882,35.3844845919533,0,0.103688191397247,0.664653872707185,1.65495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| ||
|short_description=p@chr11:2153605..2153619,- | |||
}} | }} |
Latest revision as of 21:01, 23 July 2015
Short description: | p@chr11:2153605..2153619, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:2153605..2153619, - |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.56e-10 | 19 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 5.90e-13 | 160 |
entire embryonic mesenchyme | 5.90e-13 | 160 |
extraembryonic membrane | 1.94e-12 | 14 |
membranous layer | 1.94e-12 | 14 |
cell layer | 3.11e-10 | 309 |
extraembryonic structure | 1.15e-09 | 24 |
epithelium | 1.18e-09 | 306 |
organ system subdivision | 1.70e-09 | 223 |
renal system | 1.87e-09 | 48 |
adult organism | 2.56e-09 | 114 |
urinary system structure | 3.17e-09 | 47 |
trunk mesenchyme | 3.80e-09 | 122 |
liver | 2.36e-08 | 19 |
digestive gland | 2.36e-08 | 19 |
liver bud | 2.36e-08 | 19 |
endoderm-derived structure | 6.32e-08 | 160 |
endoderm | 6.32e-08 | 160 |
presumptive endoderm | 6.32e-08 | 160 |
chorion | 2.27e-07 | 7 |
intermediate mesoderm | 6.62e-07 | 28 |
abdominal segment of trunk | 8.26e-07 | 60 |
abdomen | 8.26e-07 | 60 |
gut epithelium | 8.55e-07 | 54 |