FFCP PHASE1:Hg19::chr11:61584295..61584313,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61584295..61584313,- to FFCP PHASE1:Hg19::chr11:61584295..61584313,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3992 | |EntrezGene=3992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3574 | |HGNC=3574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000491310_5end | |||
|cluster_id=chr11:61584295..61584313,- | |||
|description=CAGE_peak_2_at_FADS1_5end | |||
|id=chr11:61584295..61584313,- | |||
|ontology_enrichment_celltype=CL:0000012!6.59e-18!682;CL:0000548!8.35e-18!679;CL:0000004!8.35e-18!679;CL:0000255!8.35e-18!679;CL:0000333!4.98e-12!41;CL:0000066!3.08e-11!254;CL:0000133!3.22e-10!59;CL:0000220!7.32e-10!246;CL:0000144!8.76e-10!625;CL:0002321!1.02e-09!248;CL:0000055!2.50e-09!180;CL:0000221!1.91e-08!71;CL:0000003!2.33e-08!722;CL:0000095!1.18e-07!17;CL:0000123!1.18e-07!17;CL:0002319!5.24e-07!25;CL:0000243!7.48e-07!15;CL:0000125!7.48e-07!15;CL:0000030!7.48e-07!15;CL:0000339!7.48e-07!15;CL:0002371!9.49e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000095;1.34e-07;17!CL:0002319;5.86e-07;25!CL:0000243;8.85e-07;15!CL:0000125;8.85e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,4.60e-12,41;CL:0000066,5.91e-11,253;CL:0000133,3.46e-10,59;CL:0002321,9.69e-10,250;CL:0000221,1.76e-08,72;CL:0000095,1.13e-07,17;CL:0000123,1.13e-07,17;CL:0002319,5.03e-07,25;CL:0000243,7.19e-07,15;CL:0000125,7.19e-07,15;CL:0000030,7.19e-07,15;CL:0000339,7.19e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;8.85e-07;15 | |||
|ontology_enrichment_disease=DOID:162!1.19e-16!235;DOID:14566!3.20e-16!239;DOID:0050687!3.78e-11!143;DOID:305!2.06e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.28e-16,235;DOID:14566,3.12e-16,239;DOID:0050687,3.87e-11,143;DOID:305,2.15e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000019!4.49e-08!19;UBERON:0000047!4.49e-08!19;UBERON:0004088!4.49e-08!19;UBERON:0003072!4.49e-08!19;UBERON:0003071!4.49e-08!19;UBERON:0004128!4.49e-08!19;UBERON:0000481!7.38e-08!347;UBERON:0000119!1.01e-07!312;UBERON:0000475!1.69e-07!365;UBERON:0002417!2.41e-07!61;UBERON:0000916!2.41e-07!61;UBERON:0000063!2.59e-07!97;UBERON:0002200!2.89e-07!11;UBERON:0006876!2.89e-07!11;UBERON:0000970!3.23e-07!20;UBERON:0002104!4.04e-07!21;UBERON:0000483!5.98e-07!309;UBERON:0000064!9.00e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;4.41e-08;19!UBERON:0000047;4.41e-08;19!UBERON:0004088;4.41e-08;19!UBERON:0010230;4.41e-08;19!UBERON:0006876;2.51e-07;11!UBERON:0000970;2.98e-07;20!UBERON:0002104;4.02e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000019,5.84e-08,20;UBERON:0000047,5.84e-08,20;UBERON:0010312,5.84e-08,20;UBERON:0004088,5.84e-08,20;UBERON:0010230,5.84e-08,20;UBERON:0003072,5.84e-08,20;UBERON:0004128,5.84e-08,20;UBERON:0003071,5.84e-08,20;UBERON:0000119,1.72e-07,309;UBERON:0006876,2.77e-07,11;UBERON:0000970,3.87e-07,21;UBERON:0002104,3.87e-07,21;UBERON:0002417,3.95e-07,60;UBERON:0000916,3.95e-07,60;UBERON:0000483,9.87e-07,306 | |||
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| ||
|short_description=p2@FADS1 | |||
}} | }} |
Latest revision as of 17:07, 18 September 2015
Short description: | p2@FADS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FADS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000491310_5end |
EntrezGene: | FADS1 |
HGNC: | 3574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 4.60e-12 | 41 |
epithelial cell | 5.91e-11 | 253 |
neurectodermal cell | 3.46e-10 | 59 |
embryonic cell | 9.69e-10 | 250 |
ectodermal cell | 1.76e-08 | 72 |
neuron associated cell | 1.13e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.13e-07 | 17 |
neural cell | 5.03e-07 | 25 |
glial cell (sensu Vertebrata) | 7.19e-07 | 15 |
glial cell | 7.19e-07 | 15 |
glioblast | 7.19e-07 | 15 |
glioblast (sensu Vertebrata) | 7.19e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
camera-type eye | 5.84e-08 | 20 |
simple eye | 5.84e-08 | 20 |
immature eye | 5.84e-08 | 20 |
ocular region | 5.84e-08 | 20 |
eyeball of camera-type eye | 5.84e-08 | 20 |
optic cup | 5.84e-08 | 20 |
optic vesicle | 5.84e-08 | 20 |
eye primordium | 5.84e-08 | 20 |
cell layer | 1.72e-07 | 309 |
vasculature of organ | 2.77e-07 | 11 |
eye | 3.87e-07 | 21 |
visual system | 3.87e-07 | 21 |
abdominal segment of trunk | 3.95e-07 | 60 |
abdomen | 3.95e-07 | 60 |
epithelium | 9.87e-07 | 306 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.28e-16 | 235 |
disease of cellular proliferation | 3.12e-16 | 239 |
cell type cancer | 3.87e-11 | 143 |
carcinoma | 2.15e-07 | 106 |