FFCP PHASE1:Hg19::chr12:28123422..28123440,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:28123422..28123440,- to FFCP PHASE1:Hg19::chr12:28123422..28123440,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5744 | |EntrezGene=5744 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9607 | |HGNC=9607 | ||
|TSSclassifier=strong | |||
|UniProt=Q53XY9 | |UniProt=Q53XY9 | ||
|association_with_transcript=-140bp_to_ENST00000535992_5end | |||
|cluster_id=chr12:28123422..28123440,- | |||
|coexpression_cluster_id=C1359 | |||
|description=CAGE_peak_8_at_PTHLH_5end | |||
|id=chr12:28123422..28123440,- | |||
|ontology_enrichment_celltype=CL:0002076!8.05e-14!43;CL:0002368!2.30e-11!13;CL:0000223!4.39e-10!59;CL:0002159!9.12e-10!13;CL:0000066!1.59e-08!254;CL:0002202!5.73e-07!9;CL:0002632!5.73e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002159;5.96e-23;14!CL:0002166;1.02e-16;3!CL:0002621;2.83e-16;3!CL:0002076;2.71e-15;42!CL:0000240;2.31e-14;6!CL:0000311;2.31e-14;6!CL:0000079;2.31e-14;6!CL:0000237;2.31e-14;6!CL:0002368;4.19e-14;13!CL:0002593;4.47e-11;2!CL:0000312;2.78e-10;5!CL:0002077;7.40e-10;34!CL:0002202;1.24e-09;9!CL:0002632;1.24e-09;9!CL:0000362;1.31e-09;9!CL:0002251;7.75e-09;20!CL:0000307;3.67e-08;3!CL:0002328;6.53e-08;3!CL:0002252;6.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.44e-23,14;CL:0002076,2.14e-18,42;CL:0002621,1.05e-16,3;CL:0002166,1.30e-16,3;CL:0000240,2.86e-14,6;CL:0000311,2.86e-14,6;CL:0000079,2.86e-14,6;CL:0000237,2.86e-14,6;CL:0000036,2.86e-14,6;CL:0000357,2.86e-14,6;CL:0000114,2.86e-14,6;CL:0002368,4.21e-14,13;CL:0000223,1.43e-12,58;CL:0000066,3.22e-11,253;CL:0002077,3.95e-11,34;CL:0002593,9.17e-11,2;CL:0000312,2.35e-10,5;CL:0000362,8.97e-10,9;CL:0002202,1.35e-09,9;CL:0002632,1.35e-09,9;CL:0002251,7.02e-09,20;CL:0000068,3.43e-08,3;CL:0000069,3.43e-08,3;CL:0000307,3.43e-08,3;CL:0000377,3.43e-08,3;CL:0002328,7.91e-08,3;CL:0002321,1.65e-07,250;CL:0002252,7.35e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;2.31e-14;6!CL:0000114;2.31e-14;6!CL:0000377;3.67e-08;3!CL:0000223;4.90e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.88e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.65e-07;1!DOID:1357;9.65e-07;1 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.47e-09!95;UBERON:0004119!3.14e-07!169;UBERON:0000925!3.14e-07!169;UBERON:0006595!3.14e-07!169;UBERON:0000475!7.00e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.83e-16;3!UBERON:0003729;7.65e-14;13!UBERON:0001708;1.14e-12;4!UBERON:0008895;1.14e-12;4!UBERON:0002456;4.47e-11;2!UBERON:0000486;9.32e-11;12!UBERON:0001828;1.01e-10;8!UBERON:0011159;3.15e-10;5!UBERON:0000344;8.57e-09;20!UBERON:0000165;3.07e-08;28!UBERON:0011137;5.70e-08;11!UBERON:0010323;5.70e-08;11!UBERON:0004807;6.12e-08;22!UBERON:0004815;6.53e-08;3!UBERON:0002031;6.53e-08;3!UBERON:0010371;2.59e-07;31!UBERON:0003929;3.06e-07;7!UBERON:0001764;9.65e-07;1!UBERON:0001825;9.65e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.05e-16,3;UBERON:0003729,5.96e-14,13;UBERON:0001708,1.37e-12,4;UBERON:0008895,1.37e-12,4;UBERON:0003102,1.50e-11,99;UBERON:0000033,4.61e-11,56;UBERON:0001828,5.93e-11,8;UBERON:0002456,9.17e-11,2;UBERON:0011159,3.64e-10,5;UBERON:0000153,9.22e-10,62;UBERON:0007811,9.22e-10,62;UBERON:0001004,2.59e-09,74;UBERON:0000344,7.33e-09,20;UBERON:0010188,1.52e-08,6;UBERON:0002539,1.52e-08,6;UBERON:0008816,1.52e-08,6;UBERON:0000165,5.81e-08,29;UBERON:0000930,5.81e-08,29;UBERON:0010323,6.55e-08,11;UBERON:0004815,7.91e-08,3;UBERON:0002031,7.91e-08,3;UBERON:0004119,1.55e-07,160;UBERON:0000925,1.55e-07,160;UBERON:0006595,1.55e-07,160 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0.919421224478927,2.409647350226,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0.175669571386252,0,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,2.37600571456411,0.989067717114227,0,0,0.168336113954066,0,0,0,0,2.10333282469236,0,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,1.73934767846967,1.90922284413584,3.15485054927904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07300799144152,3.37205259772859,1.40740561376283,1.01847289674383,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,5.62403003920662,1.17587489739202,2.26840155587818,0.895585227028483,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,2.20557117333613,0.736647911487171,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,1.95018073810956,0,0.096670718292122,0,0,0,0,0,0,0,0.991709492165869,1.72971060628596,2.04180339991335,0.809262246844399,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,1.21856744815642,1.05650146756755,0,0,0,0.551365343546124,0.66343897524122,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0,0,0.349934720244983,0.769776901804097,2.68120910214315,2.17781969722645,0.0941438007767792,0.86101074534246,3.36942951335251,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,1.22864280839693,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0.511343412510774,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0.313932918407225,1.19472429772959,0,0.138674673013139,0,0.293977192243133,0.0870592065804026,0.17472666824203,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.0633107959558787,0,0.240476460754601,0.85381197895741,0.999048047910651,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.335434687599266,0,0,0,0,0.959575986597226,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,2.19875734750328,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0,0.499921631848426,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0.228840068396924,0,0.466311601748341,0,0.318593534327405,0,1.08684069813382,0.414706207840855,0,0,0,0,0,0,0.859284456339908,0,0,0,0,0.673498977531838,0,0,0,0,0.680117776536817,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.19998739585493,0,0,0,0.736423801007363,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0,0,0,0,0,0,0.0691572524642179,0,0,0.294443155503077,0.353909170043221,1.28400018965175,0,0.381382095467167,0.690359926060101,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,1.11231401892069,0,0.314231179832004,0,0,0.647782773655864,0,0.0714765441766563,0,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,1.35535298446752,0,0,0.0771741581079447,0,0.470317296361523,0.490296643507811,0,0,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0.535661815816973,0.352894871715692,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0.435433495793923,0,0,0.143444410785353,0.332660356546013,0,0,0,0.0898252021065869,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p8@PTHLH | |||
}} | }} |
Latest revision as of 00:46, 18 September 2015
Short description: | p8@PTHLH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PTHLH_5end |
Coexpression cluster: | C1359_acantholytic_Mallassezderived_maxillary_renal_gastric_amniotic_Prostate |
Association with transcript: | -140bp_to_ENST00000535992_5end |
EntrezGene: | PTHLH |
HGNC: | 9607 |
UniProt: | Q53XY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.05e-16 | 3 |
mouth mucosa | 5.96e-14 | 13 |
jaw skeleton | 1.37e-12 | 4 |
splanchnocranium | 1.37e-12 | 4 |
surface structure | 1.50e-11 | 99 |
head | 4.61e-11 | 56 |
gingiva | 5.93e-11 | 8 |
internal thoracic artery | 9.17e-11 | 2 |
primary subdivision of cranial skeletal system | 3.64e-10 | 5 |
anterior region of body | 9.22e-10 | 62 |
craniocervical region | 9.22e-10 | 62 |
respiratory system | 2.59e-09 | 74 |
mucosa | 7.33e-09 | 20 |
protuberance | 1.52e-08 | 6 |
pharyngeal arch | 1.52e-08 | 6 |
embryonic head | 1.52e-08 | 6 |
mouth | 5.81e-08 | 29 |
stomodeum | 5.81e-08 | 29 |
cranial skeletal system | 6.55e-08 | 11 |
lower respiratory tract epithelium | 7.91e-08 | 3 |
epithelium of bronchus | 7.91e-08 | 3 |
endoderm-derived structure | 1.55e-07 | 160 |
endoderm | 1.55e-07 | 160 |
presumptive endoderm | 1.55e-07 | 160 |