FFCP PHASE1:Hg19::chr12:54379569..54379583,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:54379569..54379583,+ to FFCP PHASE1:Hg19::chr12:54379569..54379583,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3222 | |EntrezGene=3222 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5127 | |HGNC=5127 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000513209_5end | |||
|cluster_id=chr12:54379569..54379583,+ | |||
|description=CAGE_peak_9_at_HOXC5_5end | |||
|id=chr12:54379569..54379583,+ | |||
|ontology_enrichment_celltype=CL:0000035!1.08e-10!20;CL:0000062!1.09e-09!11;CL:0000375!1.09e-09!11;CL:0000335!1.09e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0002178;8.50e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,7.15e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.71e-10;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.03e-16!143;DOID:305!3.16e-09!106;DOID:14566!7.51e-09!239;DOID:162!1.98e-08!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.09e-12,106;DOID:0050687,2.62e-11,143;DOID:162,3.89e-07,235;DOID:14566,6.62e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.20e-14!9;UBERON:0001557!8.58e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.36e-35;9!UBERON:0001557;5.36e-35;9!UBERON:0000945;2.31e-12;5!UBERON:0010039;2.31e-12;5!UBERON:0000065;2.19e-07;44!UBERON:0003343;2.66e-07;4!UBERON:0004785;2.66e-07;4!UBERON:0000072;3.54e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.43e-35,9;UBERON:0001557,3.01e-16,19;UBERON:0000945,5.91e-08,8;UBERON:0010039,5.91e-08,8;UBERON:0008947,1.08e-07,38;UBERON:0003258,1.08e-07,38;UBERON:0003343,2.27e-07,4;UBERON:0004785,2.27e-07,4;UBERON:0001041,3.44e-07,87 | |||
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| ||
|short_description=p9@HOXC5 | |||
}} | }} |
Latest revision as of 04:34, 19 September 2015
Short description: | p9@HOXC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HOXC5_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000513209_5end |
EntrezGene: | HOXC5 |
HGNC: | 5127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 7.15e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.43e-35 | 9 |
upper respiratory tract | 3.01e-16 | 19 |
stomach | 5.91e-08 | 8 |
food storage organ | 5.91e-08 | 8 |
respiratory primordium | 1.08e-07 | 38 |
endoderm of foregut | 1.08e-07 | 38 |
mucosa of oral region | 2.27e-07 | 4 |
respiratory system mucosa | 2.27e-07 | 4 |
foregut | 3.44e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.09e-12 | 106 |
cell type cancer | 2.62e-11 | 143 |
cancer | 3.89e-07 | 235 |
disease of cellular proliferation | 6.62e-07 | 239 |