FFCP PHASE1:Hg19::chr12:6806552..6806592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:6806552..6806592,- | |||
|coexpression_cluster_id=C734 | |||
|description=CAGE_peak_at_chr12:6806552..6806592,- | |||
|id=chr12:6806552..6806592,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002596;8.10e-26;2!CL:0000306;1.21e-13;4!CL:0002222;1.21e-13;4!CL:0002224;1.21e-13;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002596,7.14e-26,2;CL:0000306,1.29e-13,4;CL:0002222,1.29e-13,4;CL:0002224,1.29e-13,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.55e-45!94;UBERON:0001016!4.55e-45!94;UBERON:0001049!1.58e-44!57;UBERON:0005068!1.58e-44!57;UBERON:0006241!1.58e-44!57;UBERON:0007135!1.58e-44!57;UBERON:0001017!1.18e-43!82;UBERON:0005743!1.79e-43!86;UBERON:0000955!4.68e-37!69;UBERON:0006238!4.68e-37!69;UBERON:0002616!5.87e-37!59;UBERON:0003075!9.98e-37!86;UBERON:0007284!9.98e-37!86;UBERON:0002346!1.20e-34!90;UBERON:0001869!6.02e-33!32;UBERON:0001893!1.02e-30!34;UBERON:0002020!1.75e-30!34;UBERON:0003528!1.75e-30!34;UBERON:0002780!3.37e-30!41;UBERON:0001890!3.37e-30!41;UBERON:0006240!3.37e-30!41;UBERON:0003080!2.42e-29!42;UBERON:0002791!1.46e-28!33;UBERON:0004121!2.37e-25!169;UBERON:0000924!1.72e-24!173;UBERON:0006601!1.72e-24!173;UBERON:0002619!2.31e-24!22;UBERON:0003056!3.92e-24!61;UBERON:0000956!4.01e-24!25;UBERON:0000203!4.01e-24!25;UBERON:0000033!6.45e-24!123;UBERON:0001950!3.00e-23!20;UBERON:0000153!2.43e-22!129;UBERON:0007811!2.43e-22!129;UBERON:0007023!4.27e-22!115;UBERON:0003076!2.43e-16!15;UBERON:0003057!2.43e-16!15;UBERON:0004733!4.75e-13!12;UBERON:0002028!4.75e-13!12;UBERON:0007277!4.75e-13!12;UBERON:0001871!1.70e-12!7;UBERON:0004732!6.15e-12!13;UBERON:0000200!6.83e-12!6;UBERON:0000025!7.68e-12!194;UBERON:0002771!4.12e-09!3;UBERON:0001896!1.26e-08!3;UBERON:0005290!1.26e-08!3;UBERON:0010096!1.26e-08!3;UBERON:0000475!2.26e-08!365;UBERON:0000064!2.50e-08!219;UBERON:0000483!3.58e-08!309;UBERON:0002298!4.03e-08!8;UBERON:0002420!5.26e-08!9;UBERON:0007245!5.26e-08!9;UBERON:0010009!5.26e-08!9;UBERON:0010011!5.26e-08!9;UBERON:0000454!5.26e-08!9;UBERON:0000119!5.44e-08!312;UBERON:0002308!8.18e-08!9;UBERON:0000125!8.18e-08!9;UBERON:0004111!1.01e-07!241;UBERON:0002680!2.89e-07!9;UBERON:0001895!2.89e-07!9;UBERON:0010092!2.89e-07!9;UBERON:0000477!3.31e-07!286;UBERON:0000369!3.38e-07!4;UBERON:0002435!3.38e-07!4;UBERON:0000204!3.38e-07!4;UBERON:0010082!3.38e-07!4;UBERON:0009663!6.17e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005396;8.10e-26;2!UBERON:0010077;1.21e-13;4!UBERON:0005389;1.21e-13;4!UBERON:0000484;1.21e-13;4!UBERON:0000965;1.21e-13;4!UBERON:0001803;1.21e-13;4!UBERON:0002021;2.94e-11;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005396,7.14e-26,2;UBERON:0010077,1.29e-13,4;UBERON:0005389,1.29e-13,4;UBERON:0000484,1.29e-13,4;UBERON:0002546,1.29e-13,4;UBERON:0000965,1.29e-13,4;UBERON:0001803,1.29e-13,4;UBERON:0003073,1.29e-13,4;UBERON:0005426,1.29e-13,4;UBERON:0002021,2.94e-11,5;UBERON:0000076,1.80e-07,8 | |||
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| ||
|short_description=p@chr12:6806552..6806592,- | |||
}} | }} |
Latest revision as of 11:37, 24 July 2015
Short description: | p@chr12:6806552..6806592, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6806552..6806592, - |
Coexpression cluster: | C734_brain_occipital_parietal_middle_medial_frontal_hippocampus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the carotid artery | 7.14e-26 | 2 |
crystallin accumulating cell | 1.29e-13 | 4 |
vertebrate lens cell | 1.29e-13 | 4 |
lens epithelial cell | 1.29e-13 | 4 |
Ontology term | p-value | n |
---|---|---|
carotid artery segment | 7.14e-26 | 2 |
cuboidal epithelium | 1.29e-13 | 4 |
transparent eye structure | 1.29e-13 | 4 |
simple cuboidal epithelium | 1.29e-13 | 4 |
cranial placode | 1.29e-13 | 4 |
lens of camera-type eye | 1.29e-13 | 4 |
epithelium of lens | 1.29e-13 | 4 |
lens placode | 1.29e-13 | 4 |
lens vesicle | 1.29e-13 | 4 |
occipital lobe | 2.94e-11 | 5 |
external ectoderm | 1.80e-07 | 8 |