FFCP PHASE1:Hg19::chr12:78334660..78334684,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:78334660..78334684,+ to FFCP PHASE1:Hg19::chr12:78334660..78334684,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:78334660..78334684,+ | |||
|description=CAGE_peak_at_chr12:78334660..78334684,+ | |||
|id=chr12:78334660..78334684,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.71e-35!180;CL:0000057!4.71e-27!75;CL:0000222!4.34e-21!119;CL:0000548!9.72e-20!679;CL:0000004!9.72e-20!679;CL:0000255!9.72e-20!679;CL:0000012!3.10e-19!682;CL:0000680!1.80e-18!57;CL:0000056!1.80e-18!57;CL:0000355!1.80e-18!57;CL:0000187!2.14e-16!54;CL:0000220!7.78e-16!246;CL:0002620!1.03e-15!23;CL:0000144!1.07e-15!625;CL:0002321!2.18e-15!248;CL:0002371!5.14e-14!591;CL:0000183!1.32e-13!59;CL:0000003!2.02e-13!722;CL:0000192!3.65e-13!42;CL:0000514!3.65e-13!42;CL:0000393!4.10e-13!60;CL:0000211!4.10e-13!60;CL:0002334!9.70e-11!12;CL:0000723!3.90e-10!436;CL:0000048!4.23e-10!430;CL:0000359!6.15e-10!32;CL:0000034!4.26e-09!444;CL:0000076!6.48e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.05e-20;23!CL:0002334;1.91e-15;12!CL:0000057;1.53e-14;73!CL:0002551;1.50e-08;6!CL:0002556;6.27e-08;6!CL:0002320;1.95e-07;188!CL:0002552;2.30e-07;5!CL:0000359;2.38e-07;32!CL:0002570;2.54e-07;8!CL:0000723;2.94e-07;61!CL:0000187;5.09e-07;55!CL:0002559;5.34e-07;5!CL:0000192;7.03e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.23e-34,76;CL:0002620,3.40e-20,23;CL:0000048,5.86e-19,427;CL:0000723,3.48e-18,433;CL:0000034,3.45e-17,441;CL:0002334,1.82e-15,12;CL:0000680,1.45e-13,58;CL:0000056,1.45e-13,58;CL:0000355,1.45e-13,58;CL:0000187,3.44e-11,55;CL:0000393,2.86e-09,61;CL:0000211,2.86e-09,61;CL:0000192,1.21e-08,43;CL:0000514,1.21e-08,43;CL:0002551,1.39e-08,6;CL:0000134,1.59e-08,354;CL:0000222,1.85e-08,121;CL:0002556,4.98e-08,6;CL:0002320,6.53e-08,361;CL:0000359,1.50e-07,32;CL:0002552,2.16e-07,5;CL:0002570,3.23e-07,8;CL:0000136,4.30e-07,15;CL:0002559,5.14e-07,5;CL:0000219,6.14e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000355;1.67e-07;58!CL:0000514;7.03e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!4.72e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:17;8.12e-08;5!DOID:450;8.12e-08;5!DOID:66;8.12e-08;5!DOID:423;8.12e-08;5!DOID:0080000;8.12e-08;5!DOID:11722;8.12e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.00e-08,5;DOID:450,7.00e-08,5;DOID:66,7.00e-08,5;DOID:423,7.00e-08,5;DOID:0080000,7.00e-08,5;DOID:11722,7.00e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.49e-26!83;UBERON:0002329!1.49e-26!83;UBERON:0003077!1.49e-26!83;UBERON:0003059!1.49e-26!83;UBERON:0007282!1.49e-26!83;UBERON:0009618!1.49e-26!83;UBERON:0007285!1.49e-26!83;UBERON:0004290!1.63e-23!70;UBERON:0000486!7.15e-21!82;UBERON:0003102!6.42e-20!95;UBERON:0001134!1.16e-17!61;UBERON:0002036!1.16e-17!61;UBERON:0003082!1.16e-17!61;UBERON:0002385!1.66e-16!63;UBERON:0001015!1.66e-16!63;UBERON:0000383!1.66e-16!63;UBERON:0002199!1.04e-15!45;UBERON:0002416!1.04e-15!45;UBERON:0000490!3.52e-15!138;UBERON:0005256!1.36e-14!143;UBERON:0002100!9.07e-14!216;UBERON:0002097!1.09e-13!40;UBERON:0000475!3.42e-12!365;UBERON:0002049!4.10e-11!79;UBERON:0007798!4.10e-11!79;UBERON:0001637!1.57e-10!42;UBERON:0003509!1.57e-10!42;UBERON:0004572!1.57e-10!42;UBERON:0000055!2.90e-10!69;UBERON:0001981!7.45e-10!60;UBERON:0007500!7.45e-10!60;UBERON:0004537!7.45e-10!60;UBERON:0006965!7.45e-10!60;UBERON:0004872!2.58e-09!84;UBERON:0004573!3.64e-09!33;UBERON:0004571!3.64e-09!33;UBERON:0004535!2.38e-08!110;UBERON:0002067!6.03e-08!9;UBERON:0004016!6.03e-08!9;UBERON:0010083!6.03e-08!9;UBERON:0001009!1.12e-07!113;UBERON:0003104!1.30e-07!238;UBERON:0009142!1.30e-07!238;UBERON:0000947!7.15e-07!21;UBERON:0010191!7.15e-07!21;UBERON:0001013!8.96e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.45e-15;41!UBERON:0002199;3.64e-13;46!UBERON:0002416;3.64e-13;46!UBERON:0003102;6.00e-12;50!UBERON:0002067;3.39e-11;9!UBERON:0002385;9.45e-11;31!UBERON:0001015;9.45e-11;31!UBERON:0000383;9.45e-11;31!UBERON:0001013;4.04e-09;14!UBERON:0003688;3.98e-08;6!UBERON:0002358;3.98e-08;6!UBERON:0003684;3.98e-08;6!UBERON:0001178;3.98e-08;6!UBERON:0001758;6.27e-08;6!UBERON:0003672;6.27e-08;6!UBERON:0004573;3.00e-07;33!UBERON:0004571;3.00e-07;33!UBERON:0002384;3.52e-07;198!UBERON:0002073;5.34e-07;5!UBERON:0001135;6.07e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.08e-22,46;UBERON:0002416,2.08e-22,46;UBERON:0007524,4.86e-20,73;UBERON:0002329,5.48e-20,71;UBERON:0003059,5.48e-20,71;UBERON:0007282,5.48e-20,71;UBERON:0004290,5.48e-20,71;UBERON:0009618,5.48e-20,71;UBERON:0003102,1.29e-19,99;UBERON:0003077,1.61e-19,72;UBERON:0007285,1.61e-19,72;UBERON:0002097,4.22e-19,41;UBERON:0007503,5.63e-17,78;UBERON:0000486,3.68e-15,83;UBERON:0001134,6.61e-13,62;UBERON:0002036,6.61e-13,62;UBERON:0003082,6.61e-13,62;UBERON:0002385,3.42e-12,64;UBERON:0001015,3.42e-12,64;UBERON:0000383,3.42e-12,64;UBERON:0005256,6.73e-12,122;UBERON:0002067,3.08e-11,9;UBERON:0004016,3.08e-11,9;UBERON:0010083,3.08e-11,9;UBERON:0002100,4.99e-10,199;UBERON:0000490,1.67e-09,148;UBERON:0001013,4.38e-09,14;UBERON:0002384,2.96e-08,371;UBERON:0003688,4.45e-08,6;UBERON:0002358,4.45e-08,6;UBERON:0003684,4.45e-08,6;UBERON:0001178,4.45e-08,6;UBERON:0001758,4.98e-08,6;UBERON:0003672,4.98e-08,6;UBERON:0004573,5.86e-08,33;UBERON:0004571,5.86e-08,33;UBERON:0003104,3.15e-07,160;UBERON:0009142,3.15e-07,160;UBERON:0001135,4.77e-07,15;UBERON:0002073,5.14e-07,5;UBERON:0005086,5.14e-07,5;UBERON:0001637,9.23e-07,42;UBERON:0003509,9.23e-07,42;UBERON:0004572,9.23e-07,42 | |||
|phase1_expression=6.17706489519893,7.27941781229343,7.18867460889453,2.00146596706261,2.68176656656373,2.61701557230111,5.06599756336621,6.31719873426831,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,1.20538905604795,0.730310090387373,1.95173119516203,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,1.13061588384802,0.838998872419812,0.275118041940067,0.417989933073621,0.516833518338658,0.35576626268671,0,1.61131726843659,0.760272105718513,0.976248230192678,1.47065232138347,0,0.714397826272638,0.673588117878509,0.337834441449967,0,0,0.549605231791222,0,0,0,1.98788780678127,0.633152558322899,7.15009576391382,1.14734648299525,0,1.68203280042692,0,0,2.17847724779836,0.538842688278752,1.47115712802113,0.454072282934794,0,0.234321431833797,4.37024107562449,5.70471821544449,5.52960118041664,5.63685593490071,5.6655530528846,6.03938468819669,16.1281795291366,1.35117749042945,9.40264608699466,5.94001428641027,8.40707559547093,0,0.718618141816238,2.18836948140286,1.7516592782075,16.0697186980826,3.95079858792754,7.66219489497549,5.55880817954408,0.113432183160021,6.45802688479903,6.19316427573846,11.2323907614568,3.90118424909723,10.8205155700361,5.66809188100384,5.95573940261087,4.38818463827292,4.48210223741514,7.06814567883521,17.6735805393215,0.969876340912871,2.13005755509969,2.01504196455281,0.508681776931463,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0,0,0,3.12899064659632,3.85944562915731,1.38134921352481,30.6482832501106,10.8281922250438,0.236613600079688,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.439001141634502,0,0.402115889646523,0.185176890317059,0.651616610620649,0,1.44331342025273,0.463721619900307,0,1.29929802984966,0.462985512576611,1.14152491340759,0,0,0,0,0,0.93733833986777,0,0.425325291727159,0.716468181622786,1.16253575405585,0.383382679165211,0,0,0,0,0,0.190493682876507,0,0,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0.43596006883328,0.2933531432838,1.42198887333556,3.57656445851882,5.071816515336,1.06375246633948,1.04007436911366,0,0,0,0.857867961948885,0,0.823240336780769,2.60588947434988,0,0,0.602878754119172,0.871533458600294,0.699810938274399,0,0,0,0.718874566474748,0,0,5.21212704003285,7.80810025691457,5.37182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28767947683888,7.31558854068363,7.41201350659493,2.45996971484698,0.902838299183157,0,1.03473071292505,0,0.184369168541703,7.47199084425513,0,0,0,0,0,0,0,0,9.6762045049323,13.5046536493495,6.17452207752762,4.74114852246094,10.2341449813341,3.37793234401576,1.48418066444991,6.16838775210622,3.01854933032316,7.71995266529806,9.34657972530518,3.25389059687886,0,0,0.0920809889358963,1.7222167224691,5.28064387219479,2.36023946926963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29706215198469,0,1.6068392984416,0.96670718292122,2.00263202249038,1.84204409671355,3.30807773962873,2.79292636657511,1.88521702088497,2.13066568540252,0.445160178233687,0,0.192190067365106,0.255225424989168,0,1.85938219718914,2.20368642781448,1.3940745403212,1.54016790088044,1.06461206063404,5.21959795245044,1.8532421910392,1.5743737541619,0.372158369359667,0.316379424718726,2.85945290885737,0.255897791311334,0,0.95460974377781,0,3.59744915166629,3.29444435683266,2.70968525395079,2.42618977887979,0,0,0.975267478179181,6.09283724078211,1.05650146756755,0.9554993798559,1.97967604735198,2.26016233240486,1.10273068709225,1.32687795048244,2.19225442626881,0.578775534266688,0,1.82619339266434,0.30982349809975,0.281695602532241,0.573645408816206,0.589494246078727,0,2.48332744849418,0.211107635297664,0,0.379473173765715,0,1.25088746543166,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.970884173996107,0,0.568272293612826,0,0,0,0,0,2.44879151050393,0,0,0,0,0,0,0,4.66559381492711,0.179736702294654,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,3.0957485844891,0,0,0,0,0,0,0.137041924646751,2.58328995213887,0,0,1.52301758477914,0,0.19980960958213,0,0,0,0.432164393964449,1.24252535565433,0,0,0.313808538937,0.917983958726896,0.288950589901519,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,2.52209918479682,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.528001682597033,0.179287339332845,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0,0,0,10.2232813071253,0,0,0,0,0,0,0.704815022316672,0,0,0,0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| ||
|short_description=p@chr12:78334660..78334684,+ | |||
}} | }} |
Latest revision as of 12:34, 24 July 2015
Short description: | p@chr12:78334660..78334684, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:78334660..78334684, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.23e-34 | 76 |
skin fibroblast | 3.40e-20 | 23 |
multi fate stem cell | 5.86e-19 | 427 |
somatic stem cell | 3.48e-18 | 433 |
stem cell | 3.45e-17 | 441 |
preadipocyte | 1.82e-15 | 12 |
muscle precursor cell | 1.45e-13 | 58 |
myoblast | 1.45e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.45e-13 | 58 |
muscle cell | 3.44e-11 | 55 |
electrically responsive cell | 2.86e-09 | 61 |
electrically active cell | 2.86e-09 | 61 |
smooth muscle cell | 1.21e-08 | 43 |
smooth muscle myoblast | 1.21e-08 | 43 |
fibroblast of dermis | 1.39e-08 | 6 |
mesenchymal cell | 1.59e-08 | 354 |
mesodermal cell | 1.85e-08 | 121 |
fibroblast of periodontium | 4.98e-08 | 6 |
connective tissue cell | 6.53e-08 | 361 |
vascular associated smooth muscle cell | 1.50e-07 | 32 |
fibroblast of gingiva | 2.16e-07 | 5 |
mesenchymal stem cell of adipose | 3.23e-07 | 8 |
fat cell | 4.30e-07 | 15 |
hair follicle cell | 5.14e-07 | 5 |
motile cell | 6.14e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.00e-08 | 5 |
myotonic disease | 7.00e-08 | 5 |
muscle tissue disease | 7.00e-08 | 5 |
myopathy | 7.00e-08 | 5 |
muscular disease | 7.00e-08 | 5 |
myotonic dystrophy | 7.00e-08 | 5 |