FFCP PHASE1:Hg19::chr13:111806055..111806080,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:111806055..111806080,+ to FFCP PHASE1:Hg19::chr13:111806055..111806080,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8874 | |EntrezGene=8874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |HGNC=15607 | ||
|TSSclassifier=strong | |||
|UniProt=B1ALK7,Q14155 | |UniProt=B1ALK7,Q14155 | ||
|association_with_transcript=0bp_to_ENST00000218789,NM_003899,uc001vrw.3_5end | |||
|cluster_id=chr13:111806055..111806080,+ | |||
|description=CAGE_peak_2_at_ARHGEF7_5end | |||
|id=chr13:111806055..111806080,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.03e-42!140;CL:0000037!6.54e-38!172;CL:0000566!6.54e-38!172;CL:0000988!3.03e-34!182;CL:0002032!4.42e-34!165;CL:0000837!4.42e-34!165;CL:0002087!3.48e-33!119;CL:0002031!7.85e-31!124;CL:0000542!6.59e-20!53;CL:0000051!6.59e-20!53;CL:0000838!2.54e-19!52;CL:0000766!3.07e-16!76;CL:0000763!5.24e-15!112;CL:0000049!5.24e-15!112;CL:0002057!6.37e-15!42;CL:0000860!1.84e-14!45;CL:0000557!3.73e-14!71;CL:0002009!2.82e-13!65;CL:0002194!3.13e-12!63;CL:0000576!3.13e-12!63;CL:0000040!3.13e-12!63;CL:0000559!3.13e-12!63;CL:0000839!2.11e-11!70;CL:0000945!9.00e-10!24;CL:0000826!9.00e-10!24;CL:0000084!4.30e-09!25;CL:0000827!4.30e-09!25;CL:0000236!1.48e-08!14;CL:0000791!1.62e-07!18;CL:0000789!1.62e-07!18;CL:0002420!1.62e-07!18;CL:0002419!1.62e-07!18;CL:0000790!1.62e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.99e-12;53!CL:0002087;2.92e-11;104!CL:0000860;1.51e-10;33!CL:0002057;1.51e-10;33!CL:0000945;3.94e-10;24!CL:0000576;7.00e-10;48!CL:0000084;3.13e-09;25!CL:0000738;3.87e-09;136!CL:0000236;1.55e-08;13!CL:0000473;1.17e-07;39!CL:0000234;1.17e-07;39!CL:0000791;1.39e-07;18!CL:0000789;1.39e-07;18!CL:0002419;1.39e-07;18!CL:0000766;1.90e-07;69!CL:0000988;9.85e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.67e-43,136;CL:0000037,2.45e-38,168;CL:0000988,2.51e-35,177;CL:0002032,1.81e-34,161;CL:0000837,1.81e-34,161;CL:0002087,1.44e-33,115;CL:0002031,4.01e-31,120;CL:0000542,5.20e-20,53;CL:0000051,5.20e-20,53;CL:0000838,2.02e-19,52;CL:0000766,1.92e-16,72;CL:0000763,3.47e-15,108;CL:0000049,3.47e-15,108;CL:0000860,5.36e-15,42;CL:0002057,5.36e-15,42;CL:0000557,2.56e-14,67;CL:0002009,1.89e-13,61;CL:0000473,1.41e-12,48;CL:0000234,1.41e-12,48;CL:0002194,2.23e-12,59;CL:0000576,2.23e-12,59;CL:0000040,2.23e-12,59;CL:0000559,2.23e-12,59;CL:0000839,1.80e-11,66;CL:0000945,8.09e-10,24;CL:0000826,8.09e-10,24;CL:0000084,3.90e-09,25;CL:0000827,3.90e-09,25;CL:0000236,1.35e-08,14;CL:0000791,1.50e-07,18;CL:0000789,1.50e-07,18;CL:0002420,1.50e-07,18;CL:0002419,1.50e-07,18;CL:0000790,1.50e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.99e-12;53!CL:0002057;1.92e-11;42!CL:0000790;1.39e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-14!102;UBERON:0003061!1.11e-14!102;UBERON:0002193!2.76e-13!112;UBERON:0002371!3.19e-10!80;UBERON:0001474!2.40e-09!86;UBERON:0002405!1.04e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.46e-15,98;UBERON:0003061,7.46e-15,98;UBERON:0002193,1.66e-13,108;UBERON:0002405,3.48e-11,93;UBERON:0002371,2.42e-10,76;UBERON:0001474,2.07e-09,82;UBERON:0004765,3.62e-07,90 | |||
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| ||
|short_description=p2@ARHGEF7 | |||
}} | }} |
Latest revision as of 13:58, 16 September 2015
Short description: | p2@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGEF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000218789, NM_003899, uc001vrw.3_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | B1ALK7Q14155 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.46e-15 | 98 |
blood island | 7.46e-15 | 98 |
hemolymphoid system | 1.66e-13 | 108 |
immune system | 3.48e-11 | 93 |
bone marrow | 2.42e-10 | 76 |
bone element | 2.07e-09 | 82 |
skeletal element | 3.62e-07 | 90 |