FFCP PHASE1:Hg19::chr14:105499175..105499201,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:105499175..105499201,+ | |||
|description=CAGE_peak_at_chr14:105499175..105499201,+ | |||
|id=chr14:105499175..105499201,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.22e-08!254;CL:0000244!8.55e-08!4;CL:0000731!8.55e-08!4;CL:0002076!1.22e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000244;6.41e-19;4!CL:0000731;6.41e-19;4!CL:0002541;1.05e-14;3!CL:0000064;4.39e-14;3!CL:0000067;4.39e-14;3!CL:0005012;4.39e-14;3!CL:0002304;4.39e-14;3!CL:1000415;2.10e-10;2!CL:0000349;3.61e-08;19!CL:0000322;3.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.60e-19,4;CL:0000731,3.60e-19,4;CL:0002541,1.53e-14,3;CL:0000064,6.04e-14,3;CL:0000067,6.04e-14,3;CL:0005012,6.04e-14,3;CL:0002304,6.04e-14,3;CL:1000415,2.79e-10,2;CL:0000066,8.98e-09,253;CL:0000349,4.00e-08,19;CL:0000322,2.44e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.92e-12!14;UBERON:0000158!1.92e-12!14;UBERON:0006554!1.07e-10!44;UBERON:0001008!2.53e-10!45;UBERON:0005156!1.74e-09!59;UBERON:0000990!1.74e-09!59;UBERON:0000365!5.69e-09!5;UBERON:0003124!2.67e-08!7;UBERON:0003133!6.00e-08!48;UBERON:0000488!1.76e-07!4;UBERON:0005910!2.37e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.27e-18;4!UBERON:0005631;4.58e-16;10!UBERON:0000158;4.58e-16;10!UBERON:0000365;3.64e-15;5!UBERON:0003124;1.05e-14;3!UBERON:0000920;1.05e-14;3!UBERON:0001778;4.39e-14;3!UBERON:0001775;4.39e-14;3!UBERON:0005910;1.17e-12;6!UBERON:0002203;2.68e-12;6!UBERON:0001768;2.68e-12;6!UBERON:0002200;2.68e-12;6!UBERON:0002294;5.64e-11;7!UBERON:0001173;5.64e-11;7!UBERON:0004821;3.08e-07;3!UBERON:0007499;3.08e-07;3!UBERON:0003215;3.08e-07;3!UBERON:0010368;3.08e-07;3!UBERON:0009911;3.08e-07;3!UBERON:0002299;3.08e-07;3!UBERON:0006524;3.08e-07;3!UBERON:0008874;3.08e-07;3!UBERON:0002169;3.08e-07;3!UBERON:0004894;3.08e-07;3!UBERON:0002110;3.33e-07;3!UBERON:0007625;9.61e-07;11!UBERON:0006876;9.61e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.73e-18,4;UBERON:0000365,2.30e-15,5;UBERON:0000920,1.53e-14,3;UBERON:0001778,6.04e-14,3;UBERON:0001775,6.04e-14,3;UBERON:0005910,8.02e-13,6;UBERON:0002203,3.03e-12,6;UBERON:0001768,3.03e-12,6;UBERON:0002200,3.03e-12,6;UBERON:0005631,3.04e-11,14;UBERON:0000158,3.04e-11,14;UBERON:0002294,1.65e-08,9;UBERON:0001173,1.65e-08,9;UBERON:0004912,1.65e-08,9;UBERON:0005911,3.01e-08,82;UBERON:0004821,2.44e-07,3;UBERON:0003215,2.44e-07,3;UBERON:0010368,2.44e-07,3;UBERON:0009911,2.44e-07,3;UBERON:0002299,2.44e-07,3;UBERON:0006524,2.44e-07,3;UBERON:0008874,2.44e-07,3;UBERON:0002169,2.44e-07,3;UBERON:0004894,2.44e-07,3;UBERON:0002110,4.01e-07,3;UBERON:0006242,4.01e-07,3 | |||
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| ||
|short_description=p@chr14:105499175..105499201,+ | |||
}} | }} |
Latest revision as of 18:29, 24 July 2015
Short description: | p@chr14:105499175..105499201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:105499175..105499201, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.60e-19 | 4 |
urothelial cell | 3.60e-19 | 4 |
chorionic membrane mesenchymal stem cell | 1.53e-14 | 3 |
ciliated cell | 6.04e-14 | 3 |
ciliated epithelial cell | 6.04e-14 | 3 |
multi-ciliated epithelial cell | 6.04e-14 | 3 |
non-pigmented ciliary epithelial cell | 6.04e-14 | 3 |
epithelial cell of gall bladder | 2.79e-10 | 2 |
epithelial cell | 8.98e-09 | 253 |
extraembryonic cell | 4.00e-08 | 19 |
pneumocyte | 2.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 2.73e-18 | 4 |
urothelium | 2.30e-15 | 5 |
egg chorion | 1.53e-14 | 3 |
ciliary epithelium | 6.04e-14 | 3 |
ciliary body | 6.04e-14 | 3 |
transitional epithelium | 8.02e-13 | 6 |
vasculature of eye | 3.03e-12 | 6 |
uvea | 3.03e-12 | 6 |
vasculature of head | 3.03e-12 | 6 |
extraembryonic membrane | 3.04e-11 | 14 |
membranous layer | 3.04e-11 | 14 |
biliary system | 1.65e-08 | 9 |
biliary tree | 1.65e-08 | 9 |
biliary bud | 1.65e-08 | 9 |
endo-epithelium | 3.01e-08 | 82 |
pulmonary alveolus epithelium | 2.44e-07 | 3 |
alveolus | 2.44e-07 | 3 |
pulmonary lobule | 2.44e-07 | 3 |
lobule | 2.44e-07 | 3 |
alveolus of lung | 2.44e-07 | 3 |
alveolar system | 2.44e-07 | 3 |
pulmonary acinus | 2.44e-07 | 3 |
alveolar sac | 2.44e-07 | 3 |
alveolar wall | 2.44e-07 | 3 |
gallbladder | 4.01e-07 | 3 |
gall bladder primordium | 4.01e-07 | 3 |