FFCP PHASE1:Hg19::chr14:50698343..50698352,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:50698343..50698352,- to FFCP PHASE1:Hg19::chr14:50698343..50698352,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6655 | |EntrezGene=6655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11188 | |HGNC=11188 | ||
|TSSclassifier=strong | |||
|UniProt=Q07890 | |UniProt=Q07890 | ||
|association_with_transcript=-67bp_to_ENST00000216373_5end | |||
|cluster_id=chr14:50698343..50698352,- | |||
|description=CAGE_peak_6_at_SOS2_5end | |||
|id=chr14:50698343..50698352,- | |||
|ontology_enrichment_celltype=CL:0000766!1.19e-13!76;CL:0000557!1.05e-12!71;CL:0002057!2.28e-12!42;CL:0000860!1.37e-11!45;CL:0000839!3.38e-11!70;CL:0002009!2.48e-10!65;CL:0002194!1.65e-09!63;CL:0000576!1.65e-09!63;CL:0000040!1.65e-09!63;CL:0000559!1.65e-09!63;CL:0000763!1.18e-07!112;CL:0000049!1.18e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.41e-13;48!CL:0000860;2.60e-12;33!CL:0002057;2.60e-12;33!CL:0000766;2.75e-12;69!CL:0000473;4.94e-09;39!CL:0000234;4.94e-09;39!CL:0000094;7.47e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.17e-27,72;CL:0000557,1.01e-25,67;CL:0000839,1.29e-21,66;CL:0002009,6.67e-21,61;CL:0000860,5.56e-20,42;CL:0002057,5.56e-20,42;CL:0002194,4.69e-19,59;CL:0000576,4.69e-19,59;CL:0000040,4.69e-19,59;CL:0000559,4.69e-19,59;CL:0000473,1.67e-17,48;CL:0000234,1.67e-17,48;CL:0000763,8.32e-17,108;CL:0000049,8.32e-17,108;CL:0000738,7.82e-14,136;CL:0002031,8.37e-11,120;CL:0000037,3.45e-09,168;CL:0002032,4.10e-09,161;CL:0000837,4.10e-09,161;CL:0002087,2.02e-08,115;CL:0000988,4.78e-08,177;CL:0002393,5.14e-07,9;CL:0002397,5.14e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.58e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.73e-14!102;UBERON:0003061!9.73e-14!102;UBERON:0002193!3.88e-12!112;UBERON:0004765!1.79e-10!101;UBERON:0001434!1.79e-10!101;UBERON:0001474!2.26e-10!86;UBERON:0002371!2.80e-10!80;UBERON:0002405!9.24e-07!115;UBERON:0007023!9.44e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.08e-23,98;UBERON:0003061,1.08e-23,98;UBERON:0002371,1.97e-23,76;UBERON:0001474,9.42e-22,82;UBERON:0002193,6.09e-21,108;UBERON:0004765,1.35e-18,90;UBERON:0002405,1.60e-18,93;UBERON:0001434,2.39e-16,100;UBERON:0003081,5.48e-13,203;UBERON:0002204,6.39e-09,167 | |||
|phase1_expression=0.726713517082227,0.856402095563933,0.281908808191942,1.0007329835313,0.893922188854576,0,0,0.631719873426831,0,0,0,0.655324116390517,0.263766978228454,0.247532705920093,0.994192127183747,0,0.602694528023977,0.730310090387373,0,0.492484232307152,0.408001382488506,0.313454721478088,0.286235987131057,0.410623275218653,0.376627918784408,0.0764134057479513,0.246301768349837,0.236132343941038,1.18009283054671,1.15148819429164,0.77408061658038,0,0,0.369754010166788,0.154934401160603,0,0.293600439334847,3.87796785972314,0.802177789880567,2.38711957787437,1.11957737119962,1.29557466407592,1.28787783817093,1.74477886535478,0,2.42584061187816,1.85943229524548,0,1.23882548358041,0.28769239232215,0.256160706529101,0.709446689665756,2.06847408441971,0.645484683583826,0,1.31769637679823,1.63743690034707,1.79778787556068,1.22433556948361,0.962787081228281,1.91801137739712,0.659702600373432,1.59570926097305,2.98357325372886,2.61188314765726,0.56738522469114,2.4912889959823,0.502497330513487,0.521482918420201,1.52032191293582,1.21079900526674,2.57794345191295,1.89877432464531,1.69004229049553,1.4882300997553,0.628975936525128,1.68492946719743,1.65194582125657,1.92870704036496,1.14005097496499,1.19350006319454,1.64397738388171,0,0,1.77901850772711,0.426730222566507,0.400395987036012,0.574752439954483,0,0.954053754535364,1.1384259382189,0,0,1.32171328579026,1.12101712596307,0.790152254325231,0.786839080455332,0.786021525498329,0.411202997999018,0.167186495390678,0.32592226663359,1.4203434172042,1.94826728407911,1.11410456885174,0,0,0,0.25618263945135,0.390178042679635,0,0.552700035571697,0.289803085735052,0.296573126324121,0.535081656179426,0,0.793165398882963,0.766440987203842,1.71813722741315,1.77113784413652,0.95569624297229,0.651083453856419,0,0,0.639933055772092,0,0.473554504088034,0,0,0.267440195783507,0.434473211648397,0,0,0.383587685530591,0.361439152384566,0,0.724232594804119,0.795285947051099,0.486634870302636,0.756278537312543,0.221729397462564,0.263504357079378,0.392937226493138,0,0.370784442784429,2.27183175558278,1.21890816109487,1.19662164466979,0,0,0.74291500265913,0.79504962946682,0.860234595106124,0.347140501607594,0,0,0,0,0.516833518338658,1.06729878806013,0.66944122552934,0.402829317109147,0,0,0,0.81014194788176,0.535798369704479,0.44905874525234,0.450445921933289,0,1.89853131913626,0,5.27121669744253,0,0,0.496971951695318,0.506522046658319,0.397227542439656,0.860509862246441,0.354668382198357,0,1.06748995729705,0.24666754841716,1.55605517699883,0.269421344139376,0.163461903113459,0.605429710579726,0.576175924479999,0.468642863667593,0.312160076830321,0,0.149448680551801,0.352303495931295,0,0.140450806702248,0.204154171254893,0.368502951935304,0.413303124703062,0,0.989067717114227,0,0,0.673344455816265,0.250237039743928,1.38532057742091,0,0.919463387397059,0.300476117813194,0,0.717558542755448,0.640672166455702,0.847727604638247,0,0.309157587715317,0.257640540045629,0.744467425326359,1.35021065793013,0.68205903612839,0,0.276149695926898,0.161646056818812,0,0.503760491138201,0.339121184620975,0.773043412653187,0.272746120590835,1.43402297694502,0.121973706129595,0.265059536642971,0.116193942869518,0.207322110030741,0,0,1.56449532329816,0.643240938192885,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,1.77236972004421,0,0.368965315629341,0.171567810298526,0.548751427043128,0,0.201057944823262,0.648119116109707,0,1.03993478527958,0,0.34779121492523,0.234817388471643,0.288732895522148,0,0.190254152234598,0.790204397959275,0.858486162094873,0.492434012174795,0.702012795417713,0.743155811443641,0.93733833986777,0.671928512795438,0.850650583454319,0.447792613514241,0.581267877027924,0.383382679165211,0.492663237895943,2.55340458638356,1.86595303986695,2.01767934783746,2.5248486685276,0.63497894292169,0.381988425558278,2.34434894420094,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0.336393253036082,0,0.2933531432838,0.646358578788889,0,0,1.06375246633948,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0.325736184293735,0.710783897485092,0,1.20575750823834,0,0.699810938274399,0,1.00451418286425,0,0.718874566474748,0,0,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,1.37921532141349,0.646882724578552,0.77005821767849,0.508189248444927,1.30139853857622,0,0.167516265334349,0.637938751653163,8.23907726341901,2.99161459204025,7.0450637284126,0.36807447515742,0,0.542530047399471,0.207970861530807,0.356857977594324,0.315404830067869,0.234282829985426,0.902838299183157,0,1.03473071292505,0.664225598535437,0,0.260650843404249,0,0.343143423810856,0.82707210449155,1.2942852049117,1.06727557803444,0.606255142892519,3.32870879020994,0.30239029332968,2.72918588600655,1.07423381301644,0.841980283299221,0.640695746278505,1.53512174720011,0.804269605718038,0,0,0.177561725313127,0.410635780069046,0.519254429183621,0.348631135379878,0,0.40101294060657,0.736647911487171,0.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| ||
|short_description=p6@SOS2 | |||
}} | }} |
Latest revision as of 03:29, 20 September 2015
Short description: | p6@SOS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SOS2_5end |
Coexpression cluster: | NA |
Association with transcript: | -67bp_to_ENST00000216373_5end |
EntrezGene: | SOS2 |
HGNC: | 11188 |
UniProt: | Q07890 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.17e-27 | 72 |
granulocyte monocyte progenitor cell | 1.01e-25 | 67 |
myeloid lineage restricted progenitor cell | 1.29e-21 | 66 |
macrophage dendritic cell progenitor | 6.67e-21 | 61 |
classical monocyte | 5.56e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.56e-20 | 42 |
monopoietic cell | 4.69e-19 | 59 |
monocyte | 4.69e-19 | 59 |
monoblast | 4.69e-19 | 59 |
promonocyte | 4.69e-19 | 59 |
defensive cell | 1.67e-17 | 48 |
phagocyte | 1.67e-17 | 48 |
myeloid cell | 8.32e-17 | 108 |
common myeloid progenitor | 8.32e-17 | 108 |
leukocyte | 7.82e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 8.37e-11 | 120 |
hematopoietic stem cell | 3.45e-09 | 168 |
hematopoietic oligopotent progenitor cell | 4.10e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.10e-09 | 161 |
nongranular leukocyte | 2.02e-08 | 115 |
hematopoietic cell | 4.78e-08 | 177 |
intermediate monocyte | 5.14e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.14e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.08e-23 | 98 |
blood island | 1.08e-23 | 98 |
bone marrow | 1.97e-23 | 76 |
bone element | 9.42e-22 | 82 |
hemolymphoid system | 6.09e-21 | 108 |
skeletal element | 1.35e-18 | 90 |
immune system | 1.60e-18 | 93 |
skeletal system | 2.39e-16 | 100 |
lateral plate mesoderm | 5.48e-13 | 203 |
musculoskeletal system | 6.39e-09 | 167 |