FFCP PHASE1:Hg19::chr14:75079026..75079049,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:75079026..75079049,- to FFCP PHASE1:Hg19::chr14:75079026..75079049,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4053 | |EntrezGene=4053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |HGNC=6715 | ||
|TSSclassifier=strong | |||
|UniProt=Q14767 | |UniProt=Q14767 | ||
|association_with_transcript=0bp_to_ENST00000261978,NM_000428,uc001xqa.2_5end | |||
|cluster_id=chr14:75079026..75079049,- | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_8_at_LTBP2_5end | |||
|id=chr14:75079026..75079049,- | |||
|ontology_enrichment_celltype=CL:0000055!3.91e-19!180;CL:0000057!3.37e-17!75;CL:0000222!2.30e-14!119;CL:0000359!4.01e-10!32;CL:0000183!5.28e-10!59;CL:0000115!2.32e-09!35;CL:0002139!2.65e-09!24;CL:0000680!5.41e-09!57;CL:0000056!5.41e-09!57;CL:0000355!5.41e-09!57;CL:0000192!1.09e-08!42;CL:0000514!1.09e-08!42;CL:0000071!2.82e-08!18;CL:0002546!2.82e-08!18;CL:0000220!2.85e-08!246;CL:0000187!4.56e-08!54;CL:0002334!6.49e-08!12;CL:0002321!6.84e-08!248;CL:0002078!1.50e-07!44;CL:0002371!1.85e-07!591;CL:0000213!8.52e-07!57;CL:0000215!8.52e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.01e-09;18!CL:0000359;1.89e-09;32!CL:0002334;2.23e-09;12!CL:0002139;3.83e-09;24!CL:0000115;3.33e-08;36!CL:1000413;8.84e-08;9!CL:0000057;4.58e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.30e-18,76;CL:0000222,6.13e-12,121;CL:0000071,5.42e-10,18;CL:0002546,5.42e-10,18;CL:0000359,6.81e-10,32;CL:0002139,2.09e-09,24;CL:0002334,2.54e-09,12;CL:0000115,3.50e-09,36;CL:0002078,9.23e-08,45;CL:1000413,9.24e-08,9;CL:0000192,3.70e-07,43;CL:0000514,3.70e-07,43;CL:0000213,6.01e-07,58;CL:0000215,6.01e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.01e-09;18 | |||
|ontology_enrichment_disease=DOID:2394!6.44e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.08e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.43e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.15e-26!79;UBERON:0007798!1.15e-26!79;UBERON:0000055!2.26e-22!69;UBERON:0001981!9.49e-22!60;UBERON:0007500!9.49e-22!60;UBERON:0004537!9.49e-22!60;UBERON:0006965!9.49e-22!60;UBERON:0004872!1.21e-21!84;UBERON:0001009!1.24e-18!113;UBERON:0004535!3.69e-18!110;UBERON:0001637!5.85e-17!42;UBERON:0003509!5.85e-17!42;UBERON:0004572!5.85e-17!42;UBERON:0003914!5.31e-16!118;UBERON:0004573!5.72e-14!33;UBERON:0004571!5.72e-14!33;UBERON:0000475!2.89e-12!365;UBERON:0000477!4.76e-12!286;UBERON:0000914!5.46e-12!83;UBERON:0002329!5.46e-12!83;UBERON:0003077!5.46e-12!83;UBERON:0003059!5.46e-12!83;UBERON:0007282!5.46e-12!83;UBERON:0009618!5.46e-12!83;UBERON:0007285!5.46e-12!83;UBERON:0000119!1.86e-11!312;UBERON:0000483!3.86e-11!309;UBERON:0000486!5.31e-11!82;UBERON:0000468!6.76e-11!659;UBERON:0000947!8.64e-11!21;UBERON:0010191!8.64e-11!21;UBERON:0005256!1.63e-10!143;UBERON:0000490!3.30e-10!138;UBERON:0004111!3.42e-10!241;UBERON:0004290!1.62e-09!70;UBERON:0000467!2.09e-09!625;UBERON:0002385!2.28e-09!63;UBERON:0001015!2.28e-09!63;UBERON:0000383!2.28e-09!63;UBERON:0002100!2.34e-09!216;UBERON:0001134!2.75e-09!61;UBERON:0002036!2.75e-09!61;UBERON:0003082!2.75e-09!61;UBERON:0000480!3.09e-09!626;UBERON:0003102!4.70e-09!95;UBERON:0001986!2.82e-08!18;UBERON:0004638!2.82e-08!18;UBERON:0004852!2.82e-08!18;UBERON:0001444!2.16e-07!48;UBERON:0006914!3.68e-07!25;UBERON:0000481!3.87e-07!347;UBERON:0000487!6.15e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.26e-14;33!UBERON:0004571;1.26e-14;33!UBERON:0001637;4.48e-14;42!UBERON:0003509;4.48e-14;42!UBERON:0004572;4.48e-14;42!UBERON:0000947;2.15e-13;21!UBERON:0010191;2.15e-13;21!UBERON:0007500;3.36e-11;56!UBERON:0001981;3.36e-11;56!UBERON:0004537;3.36e-11;56!UBERON:0002049;4.90e-10;75!UBERON:0007798;4.90e-10;75!UBERON:0004638;1.01e-09;18!UBERON:0001986;1.01e-09;18!UBERON:0004852;1.01e-09;18!UBERON:0000055;1.06e-09;65!UBERON:0003914;6.96e-09;74!UBERON:0006914;2.05e-08;25!UBERON:0000487;5.21e-08;22!UBERON:0003915;8.84e-08;9!UBERON:0004700;8.84e-08;9!UBERON:0001917;8.84e-08;9!UBERON:0004535;7.10e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,2.03e-25,78;UBERON:0007798,2.03e-25,78;UBERON:0007500,2.29e-22,59;UBERON:0001981,2.29e-22,59;UBERON:0004537,2.29e-22,59;UBERON:0006965,2.29e-22,59;UBERON:0000055,4.17e-21,68;UBERON:0004872,9.71e-21,83;UBERON:0001009,3.18e-18,112;UBERON:0004535,3.67e-18,109;UBERON:0001637,1.13e-17,42;UBERON:0003509,1.13e-17,42;UBERON:0004572,1.13e-17,42;UBERON:0003914,6.04e-15,117;UBERON:0004573,9.90e-15,33;UBERON:0004571,9.90e-15,33;UBERON:0000947,4.45e-13,21;UBERON:0010191,4.45e-13,21;UBERON:0004638,5.42e-10,18;UBERON:0001986,5.42e-10,18;UBERON:0004852,5.42e-10,18;UBERON:0006914,1.01e-08,25;UBERON:0000487,2.82e-08,22;UBERON:0007503,8.41e-08,78;UBERON:0003915,9.24e-08,9;UBERON:0004700,9.24e-08,9;UBERON:0001917,9.24e-08,9;UBERON:0000486,1.12e-07,83;UBERON:0000926,2.81e-07,315;UBERON:0004120,2.81e-07,315;UBERON:0006603,2.81e-07,315 | |||
|phase1_expression=4.72363786103447,4.28201047781966,3.94672331468719,7.00513088471913,2.68176656656373,3.48935409640147,10.1319951267324,0.631719873426831,2.35067065379855,0.245733936501509,0,2.18441372130172,8.70431028153897,2.10402800032079,1.32558950291166,3.36162573225888,6.62963980826375,5.11217063271161,4.39139518911456,2.70866327768933,5.50801866359483,2.19418305034661,0.572471974262113,1.64249310087461,1.63205431473244,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0.447830948479849,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,2.53007406669196,6.51739283826656,5.21447468258965,4.7717156823066,9.24606253575008,2.6469748805939,4.87804674417641,4.12823492757692,2.03017567021455,0.364295288292542,0,0,0,0,0,0,0,4.57153536943422,6.02164216574287,10.4142150482278,7.91431118693613,4.61449379830897,5.22724279686128,3.55291443112578,6.71883573840255,3.91342888955381,4.35136796594071,1.61131726843659,0,1.46437234528902,4.04429388380456,5.67099363517232,3.66128885964727,5.83776368828041,1.80178368773316,6.13266549863533,3.79706263827252,3.48083313467774,0,0,0.436094052142534,12.424298792383,4.43206790826029,4.10468460520978,18.9312169694217,3.54668382198357,0.560677600142307,1.06748995729705,2.96001058100592,0,2.55950276932407,2.12500474047496,5.44886739521753,4.03323147135999,1.64025002283658,1.24864030732128,1.1409436430889,1.79338416662161,0.117434498643765,0.485618833104395,0.140450806702248,1.22492502752936,1.22834317311768,1.75653827998801,8.31602000097437,12.6106133932064,0.910161361938026,2.15585442544872,0.673344455816265,0.375355559615893,1.10825646193673,5.70670907145089,3.98434134538726,10.3664260645552,0.794025282120147,4.48474089222155,1.70845911054854,2.11931901159562,5.10154863343484,3.50378599410692,7.21393512127762,2.97786970130544,7.25738228637445,3.80004320128675,4.54380793639406,4.23429533754577,8.40559495457822,6.39017266529906,1.0075209822764,1.18692414617341,3.09217365061275,1.09098448236334,2.29443676311203,0,0,0,0,0,0,0,4.5026865673502,1.38134921352481,5.10804720835177,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,2.80483547606892,1.2347220339942,2.94017422771084,0,0,0.590789906681404,0,0,4.63233087806019,0.548751427043128,1.1240175325762,0.301586917234893,0.833296006426766,0.977424915930974,0,1.44331342025273,1.04337364477569,7.0445216541493,0.288732895522148,0.925971025153221,0.570762456703795,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0.93733833986777,3.35964256397719,2.83550194484773,0.626909658919938,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0.205654985406647,0,0,1.79409734952577,0.43596006883328,1.1734125731352,5.42941206182667,10.7296933755565,2.535908257668,4.78688609852767,3.12022310734098,0.257207374262142,0,0.799266537048298,0.142977993658148,1.08524321078289,0,0,0.355391948742546,0.791951872933429,1.20575750823834,1.74306691720059,2.99918973546171,0,0,0,0.479249710983165,1.14861935834114,4.27910715122155,3.4747513600219,2.67119219315498,3.58121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.96306386750624,1.00034104211935,1.08506009479894,2.70362119990049,1.96271887676878,3.15404830067869,9.37131319941706,3.61135319673263,2.27407504055985,1.03473071292505,2.65690239414175,0.737476674166813,1.56390506042549,12.1396717626899,5.49029478097369,0,0,0,0,4.99306318531491,0.604780586659361,8.18755765801964,10.2819522103002,9.82310330515758,8.32904470162056,3.58195074346692,4.98647155545183,4.45254199334973,3.23840356985577,4.08391968220192,3.12083192852475,6.75030757938707,3.37010097533882,0.241718899183244,4.61164881697555,0.0920809889358963,0.34444334449382,0,0.917870904715969,0.451199612907412,0.693138033939733,0.784349769176855,0,1.89992932007176,5.68666920354483,4.08224892663638,3.02282282542995,4.62681758070868,3.25135725052623,3.01013864312912,0.254876273045038,0,2.23874754722178,0,0,1.79515087581472,2.95213181129735,1.30151357865721,1.33953315142039,0,0,0.574265537996172,1.95018073810956,4.82051789532479,2.41676795730305,0,0.15350367472613,0.689182862422653,0.966782203814463,0.145016693914229,0.511359764496605,5.07482603186403,1.15699440752685,4.03599141466723,1.78657797492418,0.4046311234222,0,13.2221185668869,2.0911118104818,3.38836938193698,2.12922412126809,4.34966496037536,4.07713282028624,0.572499546967965,1.86079184679834,2.21465597303108,0.38126038784765,1.535386747868,1.28381696410176,4.77304871888905,2.35484592059769,1.07923474549989,0.274537029736055,0.235624804691373,0.808729926293264,4.75530963519025,2.52755073743389,0.48763373908959,4.14312932373184,2.11300293513511,1.22849920267187,0,1.13008116620243,2.75682671773062,5.30751180192976,0.876901770507525,0.578775534266688,0,3.44947640836597,2.78841148289775,5.91560765317707,1.43411352204052,2.65272410735427,2.49669736036875,0.709522128141196,2.74439925886963,8.89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| ||
|short_description=p8@LTBP2 | |||
}} | }} |
Latest revision as of 01:23, 16 September 2015
Short description: | p8@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 0bp_to_ENST00000261978, NM_000428, uc001xqa.2_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | Q14767 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.30e-18 | 76 |
mesodermal cell | 6.13e-12 | 121 |
blood vessel endothelial cell | 5.42e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.42e-10 | 18 |
vascular associated smooth muscle cell | 6.81e-10 | 32 |
endothelial cell of vascular tree | 2.09e-09 | 24 |
preadipocyte | 2.54e-09 | 12 |
endothelial cell | 3.50e-09 | 36 |
meso-epithelial cell | 9.23e-08 | 45 |
endothelial cell of artery | 9.24e-08 | 9 |
smooth muscle cell | 3.70e-07 | 43 |
smooth muscle myoblast | 3.70e-07 | 43 |
lining cell | 6.01e-07 | 58 |
barrier cell | 6.01e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
vasculature | 2.03e-25 | 78 |
vascular system | 2.03e-25 | 78 |
epithelial tube open at both ends | 2.29e-22 | 59 |
blood vessel | 2.29e-22 | 59 |
blood vasculature | 2.29e-22 | 59 |
vascular cord | 2.29e-22 | 59 |
vessel | 4.17e-21 | 68 |
splanchnic layer of lateral plate mesoderm | 9.71e-21 | 83 |
circulatory system | 3.18e-18 | 112 |
cardiovascular system | 3.67e-18 | 109 |
artery | 1.13e-17 | 42 |
arterial blood vessel | 1.13e-17 | 42 |
arterial system | 1.13e-17 | 42 |
epithelial tube | 6.04e-15 | 117 |
systemic artery | 9.90e-15 | 33 |
systemic arterial system | 9.90e-15 | 33 |
aorta | 4.45e-13 | 21 |
aortic system | 4.45e-13 | 21 |
blood vessel endothelium | 5.42e-10 | 18 |
endothelium | 5.42e-10 | 18 |
cardiovascular system endothelium | 5.42e-10 | 18 |
squamous epithelium | 1.01e-08 | 25 |
simple squamous epithelium | 2.82e-08 | 22 |
epithelial vesicle | 8.41e-08 | 78 |
endothelial tube | 9.24e-08 | 9 |
arterial system endothelium | 9.24e-08 | 9 |
endothelium of artery | 9.24e-08 | 9 |
multilaminar epithelium | 1.12e-07 | 83 |
mesoderm | 2.81e-07 | 315 |
mesoderm-derived structure | 2.81e-07 | 315 |
presumptive mesoderm | 2.81e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.43e-08 | 14 |