FFCP PHASE1:Hg19::chr16:86612046..86612065,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:86612046..86612065,+ to FFCP PHASE1:Hg19::chr16:86612046..86612065,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2300 | |EntrezGene=2300 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3817 | |HGNC=3817 | ||
|TSSclassifier=strong | |||
|UniProt=Q12952,Q498Y4 | |UniProt=Q12952,Q498Y4 | ||
|association_with_transcript=-49bp_to_ENST00000320241,NM_005250,uc002fjr.2_5end | |||
|cluster_id=chr16:86612046..86612065,+ | |||
|description=CAGE_peak_3_at_FOXL1_5end | |||
|id=chr16:86612046..86612065,+ | |||
|ontology_enrichment_celltype=CL:0000192!5.69e-18!42;CL:0000514!5.69e-18!42;CL:0000183!7.70e-17!59;CL:0000680!7.14e-14!57;CL:0000056!7.14e-14!57;CL:0000355!7.14e-14!57;CL:0000187!8.36e-14!54;CL:0000055!1.69e-12!180;CL:0000393!1.71e-11!60;CL:0000211!1.71e-11!60;CL:0000359!2.27e-10!32;CL:0000057!4.97e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000669;6.31e-14;4!CL:0002575;5.75e-13;2!CL:0002593;1.37e-12;2!CL:0002595;5.04e-11;5!CL:0002582;6.20e-09;3!CL:0002379;1.05e-07;1!CL:0002599;1.19e-07;1!CL:0000192;1.50e-07;43!CL:0002601;1.63e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.12e-13,4;CL:0002575,9.05e-13,2;CL:0002593,1.64e-12,2;CL:0000192,9.69e-12,43;CL:0000514,9.69e-12,43;CL:0002595,5.70e-11,5;CL:0000680,3.84e-10,58;CL:0000056,3.84e-10,58;CL:0000355,3.84e-10,58;CL:0002582,6.33e-09,3;CL:0000187,8.34e-09,55;CL:0000393,8.98e-08,61;CL:0000211,8.98e-08,61;CL:0002379,1.06e-07,1;CL:0002599,1.12e-07,1;CL:0002601,1.63e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000514;1.50e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;1.46e-13;2!DOID:3620;1.05e-07;1!DOID:3565;1.05e-07;1!DOID:6193;1.63e-07;1!DOID:2513;3.96e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,1.66e-13,2;DOID:3620,1.06e-07,1;DOID:3565,1.06e-07,1;DOID:6193,1.97e-07,1;DOID:2513,4.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.94e-14!365;UBERON:0005256!8.57e-14!143;UBERON:0002385!2.20e-13!63;UBERON:0001015!2.20e-13!63;UBERON:0000383!2.20e-13!63;UBERON:0004290!3.93e-13!70;UBERON:0000914!7.10e-13!83;UBERON:0002329!7.10e-13!83;UBERON:0003077!7.10e-13!83;UBERON:0003059!7.10e-13!83;UBERON:0007282!7.10e-13!83;UBERON:0009618!7.10e-13!83;UBERON:0007285!7.10e-13!83;UBERON:0000486!8.28e-13!82;UBERON:0002100!1.69e-12!216;UBERON:0000481!2.41e-12!347;UBERON:0001134!2.51e-12!61;UBERON:0002036!2.51e-12!61;UBERON:0003082!2.51e-12!61;UBERON:0000119!1.26e-11!312;UBERON:0000483!6.58e-11!309;UBERON:0003104!4.63e-09!238;UBERON:0009142!4.63e-09!238;UBERON:0000477!7.24e-07!286;UBERON:0000490!7.89e-07!138;UBERON:0003914!8.59e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.80e-13;7!UBERON:0002456;1.37e-12;2!UBERON:0003834;5.04e-11;5!UBERON:0001533;5.04e-11;5!UBERON:0004913;1.63e-07;1!UBERON:0003703;1.63e-07;1!UBERON:0001174;1.63e-07;1!UBERON:0004914;1.63e-07;1!UBERON:0002394;6.68e-07;4!UBERON:0003928;6.68e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,1.93e-13,7;UBERON:0002456,1.64e-12,2;UBERON:0003834,5.70e-11,5;UBERON:0001533,5.70e-11,5;UBERON:0002394,1.41e-09,6;UBERON:0003928,1.41e-09,6;UBERON:0001134,2.33e-09,62;UBERON:0002036,2.33e-09,62;UBERON:0003082,2.33e-09,62;UBERON:0002385,5.26e-09,64;UBERON:0001015,5.26e-09,64;UBERON:0000383,5.26e-09,64;UBERON:0007503,1.91e-08,78;UBERON:0002329,6.34e-08,71;UBERON:0003059,6.34e-08,71;UBERON:0007282,6.34e-08,71;UBERON:0004290,6.34e-08,71;UBERON:0009618,6.34e-08,71;UBERON:0003077,8.69e-08,72;UBERON:0007285,8.69e-08,72;UBERON:0005256,1.01e-07,122;UBERON:0007524,1.18e-07,73;UBERON:0004913,1.85e-07,1;UBERON:0003703,1.85e-07,1;UBERON:0001174,1.85e-07,1;UBERON:0004914,1.85e-07,1 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48000529050296,0,0,0,0.302714855289863,0,0,0,0,0.896692083310806,0.469737994575059,0.161872944368132,0.280901613404497,0,2.7023549808589,0,0,0,1.82032272387605,0,1.85169725349473,1.7516592782075,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0.412210116953756,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.184099797284599,0,0,0.201504196455281,1.69560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,1.03993478527958,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0,0.7333828582095,0.258543431515556,0,0,0,0,0,0,0,0.857867961948885,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0.399891964728228,0,0,0,0.239624855491583,0,0,0,3.08214483825575,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,1.08506009479894,0,0,0,0,0,0,0,0,0,0.434418072340414,2.34961388955289,1.02943027143257,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0.482561763430822,0,0.771048469013278,0.710246901252508,0.98552587216571,2.07701771673448,1.39452454151951,0,0,0,0.229628896329213,0.910455840033585,0.524497659837696,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0,0.647747748306418,0,1.08378575017541,0.501689773854853,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0.9266210955196,0.858749320451947,0.372158369359667,0.632758849437452,0.38126038784765,1.27948895655667,0.855877976067841,0,0,0.539617372749944,0.274537029736055,0.353437207037059,1.01091240786658,0,0,3.90106991271672,1.46228093778771,1.05650146756755,0,0.565621727814851,0,0,1.32687795048244,0.876901770507525,1.15755106853338,0.655894752046633,1.01455188481352,0,0.281695602532241,0.286822704408103,0.196498082026242,1.426684205925,2.12856638442359,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,3.18796781201712,0,0,0,0,1.24415835064723,1.97710372524119,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0.992975867626496,0.313932918407225,0,0,0.138674673013139,0,0.195984794828755,0,0,2.0638323896594,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.640724475406168,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,7.29324041064332,0,0,0.447764408660622,0,0.554805861502613,0,0,0,0,0.302461847526478,0.621748802331122,0.443565449968902,0,0,0,0,1.86089200190596,0.521745061811734,0,0,0,0.363697318405119,0.322231671127465,0,0.398095888698616,2.40016658797892,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0,0,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06998520703863,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0.913158720509496,0.215927591218621,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0.392616934229891,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0.325613074443898,0.106727345877715,0,15.7194103686527,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p3@FOXL1 | |||
}} | }} |
Latest revision as of 06:59, 18 September 2015
Short description: | p3@FOXL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000320241, NM_005250, uc002fjr.2_5end |
EntrezGene: | FOXL1 |
HGNC: | 3817 |
UniProt: | Q12952Q498Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.12e-13 | 4 |
central nervous system pericyte | 9.05e-13 | 2 |
smooth muscle cell of the internal thoracic artery | 1.64e-12 | 2 |
smooth muscle cell | 9.69e-12 | 43 |
smooth muscle myoblast | 9.69e-12 | 43 |
smooth muscle cell of the subclavian artery | 5.70e-11 | 5 |
muscle precursor cell | 3.84e-10 | 58 |
myoblast | 3.84e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.84e-10 | 58 |
visceral preadipocyte | 6.33e-09 | 3 |
muscle cell | 8.34e-09 | 55 |
electrically responsive cell | 8.98e-08 | 61 |
electrically active cell | 8.98e-08 | 61 |
meningothelial cell | 1.06e-07 | 1 |
smooth muscle cell of the esophagus | 1.12e-07 | 1 |
uterine smooth muscle cell | 1.63e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 1.93e-13 | 7 |
internal thoracic artery | 1.64e-12 | 2 |
thoracic segment blood vessel | 5.70e-11 | 5 |
subclavian artery | 5.70e-11 | 5 |
bile duct | 1.41e-09 | 6 |
digestive system duct | 1.41e-09 | 6 |
skeletal muscle tissue | 2.33e-09 | 62 |
striated muscle tissue | 2.33e-09 | 62 |
myotome | 2.33e-09 | 62 |
muscle tissue | 5.26e-09 | 64 |
musculature | 5.26e-09 | 64 |
musculature of body | 5.26e-09 | 64 |
epithelial vesicle | 1.91e-08 | 78 |
somite | 6.34e-08 | 71 |
presomitic mesoderm | 6.34e-08 | 71 |
presumptive segmental plate | 6.34e-08 | 71 |
dermomyotome | 6.34e-08 | 71 |
trunk paraxial mesoderm | 6.34e-08 | 71 |
paraxial mesoderm | 8.69e-08 | 72 |
presumptive paraxial mesoderm | 8.69e-08 | 72 |
trunk mesenchyme | 1.01e-07 | 122 |
dense mesenchyme tissue | 1.18e-07 | 73 |
hepatopancreatic ampulla | 1.85e-07 | 1 |
extrahepatic bile duct | 1.85e-07 | 1 |
common bile duct | 1.85e-07 | 1 |
duodenal papilla | 1.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 1.66e-13 | 2 |
central nervous system cancer | 1.06e-07 | 1 |
meningioma | 1.06e-07 | 1 |
epithelioid sarcoma | 1.97e-07 | 1 |
basal cell carcinoma | 4.60e-07 | 1 |