FFCP PHASE1:Hg19::chr17:37824598..37824605,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5409 | |EntrezGene=5409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9160 | |HGNC=9160 | ||
|TSSclassifier=strong | |||
|UniProt=P11086 | |UniProt=P11086 | ||
|association_with_transcript=91bp_to_ENST00000269582,NM_002686,uc002hsi.1_5end | |||
|cluster_id=chr17:37824598..37824605,+ | |||
|coexpression_cluster_id=C477 | |||
|description=CAGE_peak_15_at_PNMT_5end | |||
|id=chr17:37824598..37824605,+ | |||
|ontology_enrichment_celltype=CL:0000349!2.34e-15!3;CL:0002577!2.34e-15!3;CL:0002536!8.68e-11!2;CL:0002541!2.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002577;3.59e-98;3!CL:0000349;2.55e-62;19!CL:0002536;6.48e-18;2!CL:0002541;3.06e-12;3!CL:0002569;7.17e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,4.24e-98,3;CL:0000349,2.55e-62,19;CL:0002536,6.48e-18,2;CL:0002541,2.89e-12,3;CL:0002569,7.17e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!2.79e-17!7;UBERON:0005631!3.68e-16!14;UBERON:0000158!3.68e-16!14;UBERON:0000478!9.92e-12!24;UBERON:0001987!1.25e-11!4;UBERON:0004340!1.25e-11!4;UBERON:0002148!5.31e-10!2;UBERON:0009662!5.31e-10!2;UBERON:0002020!2.28e-08!34;UBERON:0003528!2.28e-08!34;UBERON:0002308!5.37e-08!9;UBERON:0000125!5.37e-08!9;UBERON:0002616!7.43e-08!59;UBERON:0000476!2.12e-07!3;UBERON:0000920!2.12e-07!3;UBERON:0006947!2.56e-07!3;UBERON:0004054!2.56e-07!3;UBERON:0007023!3.80e-07!115;UBERON:0001017!4.12e-07!82;UBERON:0000988!6.17e-07!3;UBERON:0006331!6.17e-07!3;UBERON:0000073!8.42e-07!94;UBERON:0001016!8.42e-07!94;UBERON:0001049!9.20e-07!57;UBERON:0005068!9.20e-07!57;UBERON:0006241!9.20e-07!57;UBERON:0007135!9.20e-07!57;UBERON:0002791!9.55e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;6.21e-74;4!UBERON:0000478;1.68e-49;24!UBERON:0005631;3.36e-14;10!UBERON:0000158;3.36e-14;10!UBERON:0003124;3.06e-12;3!UBERON:0000920;3.06e-12;3!UBERON:0000077;9.80e-12;27!UBERON:0000474;3.83e-07;37!UBERON:0003422;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,8.28e-75,7;UBERON:0001987,7.04e-74,4;UBERON:0004340,7.04e-74,4;UBERON:0005631,1.10e-58,14;UBERON:0000158,1.10e-58,14;UBERON:0000478,1.68e-49,24;UBERON:0000995,7.53e-15,21;UBERON:0005795,3.27e-14,22;UBERON:0003975,3.27e-14,22;UBERON:0004923,6.15e-13,66;UBERON:0004175,1.33e-12,25;UBERON:0000920,2.89e-12,3;UBERON:0000077,5.69e-11,29;UBERON:0003134,9.33e-09,37;UBERON:0000474,9.33e-09,37;UBERON:0003100,5.71e-08,41;UBERON:0006554,4.89e-07,47;UBERON:0003133,6.65e-07,48;UBERON:0001008,6.65e-07,48;UBERON:0003422,7.17e-07,6 | |||
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| ||
|short_description=p15@PNMT | |||
}} | }} |
Latest revision as of 22:29, 19 September 2015
Short description: | p15@PNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PNMT_5end |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | 91bp_to_ENST00000269582, NM_002686, uc002hsi.1_5end |
EntrezGene: | PNMT |
HGNC: | 9160 |
UniProt: | P11086 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 4.24e-98 | 3 |
extraembryonic cell | 2.55e-62 | 19 |
amniotic epithelial cell | 6.48e-18 | 2 |
chorionic membrane mesenchymal stem cell | 2.89e-12 | 3 |
mesenchymal stem cell of umbilical cord | 7.17e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chorion | 8.28e-75 | 7 |
placenta | 7.04e-74 | 4 |
allantois | 7.04e-74 | 4 |
extraembryonic membrane | 1.10e-58 | 14 |
membranous layer | 1.10e-58 | 14 |
extraembryonic structure | 1.68e-49 | 24 |
uterus | 7.53e-15 | 21 |
embryonic uterus | 3.27e-14 | 22 |
internal female genitalia | 3.27e-14 | 22 |
organ component layer | 6.15e-13 | 66 |
internal genitalia | 1.33e-12 | 25 |
egg chorion | 2.89e-12 | 3 |
mixed endoderm/mesoderm-derived structure | 5.69e-11 | 29 |
female reproductive organ | 9.33e-09 | 37 |
female reproductive system | 9.33e-09 | 37 |
female organism | 5.71e-08 | 41 |
urinary system structure | 4.89e-07 | 47 |
reproductive organ | 6.65e-07 | 48 |
renal system | 6.65e-07 | 48 |
mesenchyme of umbilical cord | 7.17e-07 | 6 |