FFCP PHASE1:Hg19::chr17:42977122..42977147,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42977122..42977147,+ to FFCP PHASE1:Hg19::chr17:42977122..42977147,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=388389 | |EntrezGene=388389 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=35153,32700 | |HGNC=35153,32700 | ||
|TSSclassifier=strong | |||
|UniProt=A6NFU0,Q8IW40 | |UniProt=A6NFU0,Q8IW40 | ||
|association_with_transcript=0bp_to_ENST00000331733,ENST00000410006,ENST00000412523,ENST00000417826_5end | |||
|cluster_id=chr17:42977122..42977147,+ | |||
|description=CAGE_peak_1_at_FAM187A_5end,CAGE_peak_2_at_CCDC103_5end | |||
|id=chr17:42977122..42977147,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;2.82e-09;4!CL:0002602;3.88e-09;2!CL:0002575;1.05e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,2.05e-09,2;CL:0000669,4.31e-09,4;CL:0002575,8.35e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.05e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.58e-12!365;UBERON:0000481!8.66e-12!347;UBERON:0000033!1.92e-09!123;UBERON:0000153!5.29e-09!129;UBERON:0007811!5.29e-09!129;UBERON:0000468!2.09e-07!659;UBERON:0000464!3.18e-07!104;UBERON:0000922!7.09e-07!612;UBERON:0000924!8.35e-07!173;UBERON:0006601!8.35e-07!173;UBERON:0004121!9.58e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.88e-13;5!UBERON:0002216;2.88e-13;5!UBERON:0011134;2.88e-13;5!UBERON:0002209;2.88e-13;5!UBERON:0002213;2.88e-13;5!UBERON:0007844;2.88e-13;5!UBERON:0011138;2.88e-13;5!UBERON:0001130;2.88e-13;5!UBERON:0001066;2.88e-13;5!UBERON:0001468;2.88e-13;5!UBERON:0000369;2.82e-09;4!UBERON:0002435;2.82e-09;4!UBERON:0000204;2.82e-09;4!UBERON:0006444;3.88e-09;2!UBERON:0001995;3.88e-09;2!UBERON:0004715;3.88e-09;2!UBERON:0001873;1.05e-08;2!UBERON:0004905;2.65e-08;8!UBERON:0000982;2.65e-08;8!UBERON:0004770;2.65e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.75e-13,5;UBERON:0002216,2.75e-13,5;UBERON:0011134,2.75e-13,5;UBERON:0002209,2.75e-13,5;UBERON:0002213,2.75e-13,5;UBERON:0005856,2.75e-13,5;UBERON:0005866,2.75e-13,5;UBERON:0005863,2.75e-13,5;UBERON:0007844,2.75e-13,5;UBERON:0011138,2.75e-13,5;UBERON:0001130,2.75e-13,5;UBERON:0001066,2.75e-13,5;UBERON:0001468,2.75e-13,5;UBERON:0006444,2.05e-09,2;UBERON:0001995,2.05e-09,2;UBERON:0004715,2.05e-09,2;UBERON:0000369,2.97e-09,4;UBERON:0002435,2.97e-09,4;UBERON:0000204,2.97e-09,4;UBERON:0010082,2.97e-09,4;UBERON:0001873,6.09e-09,2;UBERON:0010122,6.09e-09,2;UBERON:0004905,2.57e-08,8;UBERON:0000982,2.57e-08,8;UBERON:0004770,2.57e-08,8 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,0.263766978228454,2.72285976512103,1.65698687863958,0,0.602694528023977,0.730310090387373,0,0.61560529038394,0.204000691244253,0.626909442956176,0,0.410623275218653,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0.587200878669695,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,2.61958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0.576175924479999,0.234321431833797,0.312160076830321,1.1409436430889,0.298897361103602,0.23486899728753,0.485618833104395,0,0.408308342509787,0.859840221182376,0.826606249406124,2.37600571456411,0.247266929278557,0,0,0.505008341862199,0.500474079487857,0,0.877955241761676,0.30648779579902,0.300476117813194,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0.515281080091258,0.558350568994769,0.506328996723799,0,0.252433774244115,0,0.484938170456436,0,0.403008392910561,0.169560592310488,1.54608682530637,0,0.286804595389004,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0.703702806881416,0.740707561268237,0.651616610620649,1.03993478527958,0,1.04337364477569,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,1.58040879591855,1.71697232418975,0,0,0.297262324577456,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0.288239906833923,0.25248486685276,0.380987365753014,0,0,0,0.205654985406647,0.600686115687835,0,0.224262168690721,0,0,0.258543431515556,0,0,0.26593811658487,0,0.771622122786426,0,0.799266537048298,0,0,0.823240336780769,0.65147236858747,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0.128343036279748,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0.858840442033979,2.00068208423871,1.08506009479894,0.415941723061614,0,0.157702415033935,0.234282829985426,0,2.27407504055985,0,0,0,0.521301686808497,1.95801157462741,1.02943027143257,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.492762936082855,0,0.348631135379878,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.546273504020151,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.676695028044854,0.308097234229289,0,0,0.859361958946189,0.580066775656914,0.255679882248303,0.178064071293475,0,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0,0.255897791311334,0,0.636406495851874,0,0.539617372749944,0,0.589062011728432,0.202182481573316,0,0.421258456238981,0.48763373908959,0.731140468893853,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,1.12678241012897,0.286822704408103,0,0.7133421029625,1.41904425628239,0.633322905892992,0,0.379473173765715,0.349934720244983,0.192444225451024,0.670302275535787,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0,0.296964680832639,0.307160702099232,0.994147647766298,0.844016498463076,0.111308705022906,0,0,0.597743964753209,0,0.251932747854276,0.613612095012929,0.123084805461069,0,0.269605053441981,0,0,0,0,0,2.90799823828566,0.834912883456661,0,0.260427761085233,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0,1.77148277162768,1.20596438625408,0,0.110579259931225,0,1.31631238292384,0.21787692703798,0,0.307801034015188,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0.457987967009312,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.353830258013357,0,0,0.123563938946503,0.313265848516366,0.67401132980677,0,0,0.364909578431332,0.5869938567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| |phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,0.263766978228454,2.72285976512103,1.65698687863958,0,0.602694528023977,0.730310090387373,0,0.61560529038394,0.204000691244253,0.626909442956176,0,0.410623275218653,0,0,0.164201178899891,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.154934401160603,0.142169232487422,0.587200878669695,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.263504357079378,2.61958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0.516833518338658,0.35576626268671,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0.576175924479999,0.234321431833797,0.312160076830321,1.1409436430889,0.298897361103602,0.23486899728753,0.485618833104395,0,0.408308342509787,0.859840221182376,0.826606249406124,2.37600571456411,0.247266929278557,0,0,0.505008341862199,0.500474079487857,0,0.877955241761676,0.30648779579902,0.300476117813194,0,0.179389635688862,0.427114777637135,0.211931901159562,0,0,0.515281080091258,0.558350568994769,0.506328996723799,0,0.252433774244115,0,0.484938170456436,0,0.403008392910561,0.169560592310488,1.54608682530637,0,0.286804595389004,0.243947412259191,0,0.232387885739037,0.207322110030741,0,0.36497735907583,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0.8231480226628,0,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0.703702806881416,0.740707561268237,0.651616610620649,1.03993478527958,0,1.04337364477569,0.117408694235822,0.144366447761074,0.462985512576611,0.380508304469197,1.58040879591855,1.71697232418975,0,0,0.297262324577456,0,0.16798212819886,0.283550194484773,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0.288239906833923,0.25248486685276,0.380987365753014,0,0,0,0.205654985406647,0.600686115687835,0,0.224262168690721,0,0,0.258543431515556,0,0,0.26593811658487,0,0.771622122786426,0,0.799266537048298,0,0,0.823240336780769,0.65147236858747,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0.61642896765115,0,0,0,0,0.128343036279748,0.508189248444927,1.30139853857622,0,0.335032530668698,0,0,0,0,0.858840442033979,2.00068208423871,1.08506009479894,0.415941723061614,0,0.157702415033935,0.234282829985426,0,2.27407504055985,0,0,0,0.521301686808497,1.95801157462741,1.02943027143257,0,0,0,0.303127571446259,0,0,0.248107807818777,0,0,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0.492762936082855,0,0.348631135379878,0.241718899183244,0.200506470303285,0.0920809889358963,0.114814448164607,0.546273504020151,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,1.00337954770971,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.676695028044854,0.308097234229289,0,0,0.859361958946189,0.580066775656914,0.255679882248303,0.178064071293475,0,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,0,0,0,0.255897791311334,0,0.636406495851874,0,0.539617372749944,0,0.589062011728432,0.202182481573316,0,0.421258456238981,0.48763373908959,0.731140468893853,0,0.272999822815972,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0,1.12678241012897,0.286822704408103,0,0.7133421029625,1.41904425628239,0.633322905892992,0,0.379473173765715,0.349934720244983,0.192444225451024,0.670302275535787,0,0,0,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0.111443384277478,0,0,0.296964680832639,0.307160702099232,0.994147647766298,0.844016498463076,0.111308705022906,0,0,0.597743964753209,0,0.251932747854276,0.613612095012929,0.123084805461069,0,0.269605053441981,0,0,0,0,0,2.90799823828566,0.834912883456661,0,0.260427761085233,0.174919999992391,0,0.227586896570999,0,0.236387681767936,0.344743373241465,0,0,1.77148277162768,1.20596438625408,0,0.110579259931225,0,1.31631238292384,0.21787692703798,0,0.307801034015188,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0.457987967009312,0,0,0,0.166211681900156,0,0.19606253431774,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0.353830258013357,0,0,0.123563938946503,0.313265848516366,0.67401132980677,0,0,0.364909578431332,0.5869938567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| ||
|short_description=p1@FAM187A,p2@CCDC103 | |||
}} | }} |
Latest revision as of 22:52, 24 September 2015
Short description: | p1@FAM187A, p2@CCDC103 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM187A_5end, CAGE_peak_2_at_CCDC103_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000331733, ENST00000410006, ENST00000412523, ENST00000417826_5end |
EntrezGene: | CCDC103 |
HGNC: | 32700&submit=Submit 35153, 32700 |
UniProt: | A6NFU0Q8IW40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 2.05e-09 | 2 |
pericyte cell | 4.31e-09 | 4 |
central nervous system pericyte | 8.35e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.75e-13 | 5 |
symphysis | 2.75e-13 | 5 |
nonsynovial joint | 2.75e-13 | 5 |
fibrous joint | 2.75e-13 | 5 |
cartilaginous joint | 2.75e-13 | 5 |
developing mesenchymal condensation | 2.75e-13 | 5 |
pre-cartilage condensation | 2.75e-13 | 5 |
cartilaginous condensation | 2.75e-13 | 5 |
cartilage element | 2.75e-13 | 5 |
post-cranial axial skeletal system | 2.75e-13 | 5 |
vertebral column | 2.75e-13 | 5 |
intervertebral disk | 2.75e-13 | 5 |
intervertebral joint | 2.75e-13 | 5 |
annulus fibrosus | 2.05e-09 | 2 |
fibrocartilage | 2.05e-09 | 2 |
annulus fibrosus disci intervertebralis | 2.05e-09 | 2 |
corpus striatum | 2.97e-09 | 4 |
striatum | 2.97e-09 | 4 |
ventral part of telencephalon | 2.97e-09 | 4 |
future corpus striatum | 2.97e-09 | 4 |
caudate nucleus | 6.09e-09 | 2 |
future caudate nucleus | 6.09e-09 | 2 |
articulation | 2.57e-08 | 8 |
skeletal joint | 2.57e-08 | 8 |
articular system | 2.57e-08 | 8 |