FFCP PHASE1:Hg19::chr19:40785172..40785196,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:40785172..40785196,- to FFCP PHASE1:Hg19::chr19:40785172..40785196,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=208 | |EntrezGene=208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=392 | |HGNC=392 | ||
|TSSclassifier=strong | |||
|UniProt=C9J258 | |UniProt=C9J258 | ||
|association_with_transcript=36bp_to_ENST00000416994_5end | |||
|cluster_id=chr19:40785172..40785196,- | |||
|description=CAGE_peak_6_at_AKT2_5end | |||
|id=chr19:40785172..40785196,- | |||
|ontology_enrichment_celltype=CL:0000057!1.91e-20!75;CL:0000055!1.11e-19!180;CL:0000136!1.33e-12!15;CL:0000183!3.94e-10!59;CL:0002620!6.10e-10!23;CL:0000187!7.07e-09!54;CL:0002334!1.09e-08!12;CL:0000680!1.75e-08!57;CL:0000056!1.75e-08!57;CL:0000355!1.75e-08!57;CL:0000393!6.37e-07!60;CL:0000211!6.37e-07!60;CL:0000192!6.99e-07!42;CL:0000514!6.99e-07!42;CL:0000048!7.95e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.11e-16;13!CL:0002620;2.02e-09;23!CL:0002559;6.93e-08;5!CL:0002334;8.74e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.17e-19,15;CL:0000057,5.04e-16,76;CL:0002620,1.04e-09,23;CL:0000048,3.47e-09,427;CL:0002320,9.29e-09,361;CL:0000723,1.04e-08,433;CL:0000034,4.21e-08,441;CL:0002559,5.40e-08,5;CL:0002334,6.10e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.58e-07,5;DOID:450,9.58e-07,5;DOID:66,9.58e-07,5;DOID:423,9.58e-07,5;DOID:0080000,9.58e-07,5;DOID:11722,9.58e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!5.89e-11!70;UBERON:0000914!1.45e-10!83;UBERON:0002329!1.45e-10!83;UBERON:0003077!1.45e-10!83;UBERON:0003059!1.45e-10!83;UBERON:0007282!1.45e-10!83;UBERON:0009618!1.45e-10!83;UBERON:0007285!1.45e-10!83;UBERON:0000475!2.38e-10!365;UBERON:0002199!5.64e-10!45;UBERON:0002416!5.64e-10!45;UBERON:0000479!1.16e-09!787;UBERON:0002385!5.47e-09!63;UBERON:0001015!5.47e-09!63;UBERON:0000383!5.47e-09!63;UBERON:0000486!1.60e-08!82;UBERON:0001134!1.89e-08!61;UBERON:0002036!1.89e-08!61;UBERON:0003082!1.89e-08!61;UBERON:0001013!1.54e-07!14;UBERON:0002097!1.54e-07!40;UBERON:0003102!5.01e-07!95;UBERON:0005256!5.17e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.63e-10;14!UBERON:0004457;9.35e-09;9!UBERON:0000042;9.35e-09;9!UBERON:0003688;1.77e-08;6!UBERON:0002358;1.77e-08;6!UBERON:0003684;1.77e-08;6!UBERON:0001178;1.77e-08;6!UBERON:0002199;6.47e-08;46!UBERON:0002416;6.47e-08;46!UBERON:0002073;6.93e-08;5!UBERON:0004905;1.42e-07;8!UBERON:0000982;1.42e-07;8!UBERON:0004770;1.42e-07;8!UBERON:0002097;1.72e-07;41!UBERON:0011135;3.01e-07;5!UBERON:0002216;3.01e-07;5!UBERON:0011134;3.01e-07;5!UBERON:0002209;3.01e-07;5!UBERON:0002213;3.01e-07;5!UBERON:0007844;3.01e-07;5!UBERON:0011138;3.01e-07;5!UBERON:0001130;3.01e-07;5!UBERON:0001066;3.01e-07;5!UBERON:0001468;3.01e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,2.39e-12,46;UBERON:0002416,2.39e-12,46;UBERON:0001013,2.83e-10,14;UBERON:0002097,1.23e-09,41;UBERON:0002384,9.82e-09,371;UBERON:0003688,1.33e-08,6;UBERON:0002358,1.33e-08,6;UBERON:0003684,1.33e-08,6;UBERON:0001178,1.33e-08,6;UBERON:0002073,5.40e-08,5;UBERON:0005086,5.40e-08,5;UBERON:0003102,8.64e-08,99;UBERON:0000479,1.23e-07,773;UBERON:0004457,1.24e-07,12;UBERON:0000042,1.24e-07,12;UBERON:0004905,1.77e-07,8;UBERON:0000982,1.77e-07,8;UBERON:0004770,1.77e-07,8;UBERON:0011135,3.25e-07,5;UBERON:0002216,3.25e-07,5;UBERON:0011134,3.25e-07,5;UBERON:0002209,3.25e-07,5;UBERON:0002213,3.25e-07,5;UBERON:0005856,3.25e-07,5;UBERON:0005866,3.25e-07,5;UBERON:0005863,3.25e-07,5;UBERON:0007844,3.25e-07,5;UBERON:0011138,3.25e-07,5;UBERON:0001130,3.25e-07,5;UBERON:0001066,3.25e-07,5;UBERON:0001468,3.25e-07,5 | |||
|phase1_expression=1.99846217197612,1.71280419112787,2.67813367782345,7.00513088471913,2.23480547213644,5.23403114460221,2.53299878168311,2.52687949370732,3.65659879479774,0,0,0,0,2.72285976512103,5.30235801164665,0,0,0.730310090387373,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.511450247374121,0.361439152384566,0,0.144846518960824,1.5905718941022,1.45990461090791,0.567208902984407,0.886917589850256,0.087834785693126,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.39293562831038,1.05927344650575,1.72101972449288,0.709336764396714,1.12135520028461,0,0.24666754841716,3.42332138939743,0.134710672069688,0.163461903113459,3.02714855289863,5.18558332031999,0.70296429550139,0,0.570471821544449,0.896692083310806,0.587172493218824,0.647491777472526,0.280901613404497,1.63323337003915,0.368502951935304,2.78979609174567,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0.125118519871964,1.10825646193673,0,0,0,0.226864366320042,1.97328599257748,1.70845911054854,2.7551147150743,2.40072876867522,2.16410311400722,1.8034837803194,1.48893485065272,1.68776332241266,3.80004320128675,2.52433774244115,4.23429533754577,5.98090410229604,2.13005755509969,1.10827308050404,1.86516651541536,0,0,0,0,0,0,0,0,0,1.56449532329816,10.2918550110862,2.76269842704961,11.1448302727675,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,11.7606969108434,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0.87192013766656,0.4400297149257,0.775630294546667,17.8828222925941,0,1.32969058292435,0,0,1.41849132023278,0.799266537048298,1.00084595560703,22.2474858210492,6.58592269424615,0,1.06617584622764,0,0,0,0,0,0,0,1.19812427745791,1.14861935834114,0,0.868687840005475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18997878469764,1.50051156317903,2.17012018959788,0,0.713715955188647,0.157702415033935,0.35142424497814,13.8435205874751,4.5481500811197,2.0694614258501,0.664225598535437,1.47495334833363,1.91143951829782,4.89502893656851,3.77457766191941,0,0,0,0,0,0,5.70647957983187,0.920771839728375,5.05188169979532,2.81906128362542,4.09365799253363,1.60853921143608,2.96836132889982,0.771048469013278,1.77561725313127,1.47828880824856,1.03850885836724,0.929683027679674,0,0,0,1.37777337797528,0.364182336013434,2.88473712910733,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0.574265537996172,0,1.6068392984416,0.290012154876366,0,0.15350367472613,0.275673144969061,2.14840489736547,2.75531718437034,0.511359764496605,2.75999310504886,0,0,0,0,3.71876439437829,2.51849877464512,4.1822236209636,0.616067160352178,0.532306030317022,0.869932992075073,0.55597265731176,0,0,0,0.190630193923825,2.81487570442467,3.85145089230528,2.86382923133343,0,1.79872457583315,2.47083326762449,1.17812402345686,0.606547444719948,0,0,1.46290121726877,0.243713489631284,0,2.45699840534374,1.27264888758341,3.39024349860728,1.10273068709225,0.66343897524122,0,5.20897980840019,7.87073702455959,0,0,0.281695602532241,0.573645408816206,0.88424136911809,0,0,1.05553817648832,1.64647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0.28853842595289,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,8.63059139075251,0,0,0.33307196799782,0,0,1.17206543417515,0,0,0,0,1.18785872333055,0,0.994147647766298,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,0.591095237907095,0,0,0,5.07871706125061,0,0,0,0,0,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,1.83309043480088,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,1.20990716048664,0,1.20054501294127,0,0,0,0,0,0,3.69992409838731,0,0,0,0,4.01871336956669,0,0,0,0,0.775912131907355,0,1.58186518546373,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0.136905378891993,0,0,0,0.558564802544508,1.60412296808179,0,0.798716001995964,0.429226048136571,0.446342914883745,0.739018197353989,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.630445658393585,2.41291105420991,0,0,0,0.714695326373367,0,0,2.17199840701485,1.72844298240254,6.20515984207877,0,0,1.87426823963964,0,0,0,0,0.13223260174269,0,0,0,1.10043013569766,0,0,0,0,0,5.44017803369474,2.7575888342497,2.75711019087115,7.2131978756157,0,0,0,0.1251909307065,0,0.332787154610557,0.18628920882415,0.138348634936231,0,0,0,0,0,0,3.13435086062435,0.701139929541673,1.10961172300523,0.189403005275089,1.0062716070103,6.22867855117575,0.228840068396924,2.11723293268535,1.24349760466224,0.295710299979268,0.159296767163702,0,0,2.073531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| ||
|short_description=p6@AKT2 | |||
}} | }} |
Latest revision as of 01:34, 18 September 2015
Short description: | p6@AKT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AKT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENST00000416994_5end |
EntrezGene: | AKT2 |
HGNC: | 392 |
UniProt: | C9J258 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.17e-19 | 15 |
fibroblast | 5.04e-16 | 76 |
skin fibroblast | 1.04e-09 | 23 |
multi fate stem cell | 3.47e-09 | 427 |
connective tissue cell | 9.29e-09 | 361 |
somatic stem cell | 1.04e-08 | 433 |
stem cell | 4.21e-08 | 441 |
hair follicle cell | 5.40e-08 | 5 |
preadipocyte | 6.10e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
integument | 2.39e-12 | 46 |
integumental system | 2.39e-12 | 46 |
adipose tissue | 2.83e-10 | 14 |
skin of body | 1.23e-09 | 41 |
connective tissue | 9.82e-09 | 371 |
omentum | 1.33e-08 | 6 |
peritoneum | 1.33e-08 | 6 |
abdominal cavity | 1.33e-08 | 6 |
visceral peritoneum | 1.33e-08 | 6 |
hair follicle | 5.40e-08 | 5 |
hair follicle placode | 5.40e-08 | 5 |
surface structure | 8.64e-08 | 99 |
tissue | 1.23e-07 | 773 |
cavity lining | 1.24e-07 | 12 |
serous membrane | 1.24e-07 | 12 |
articulation | 1.77e-07 | 8 |
skeletal joint | 1.77e-07 | 8 |
articular system | 1.77e-07 | 8 |
intervertebral cartilage | 3.25e-07 | 5 |
symphysis | 3.25e-07 | 5 |
nonsynovial joint | 3.25e-07 | 5 |
fibrous joint | 3.25e-07 | 5 |
cartilaginous joint | 3.25e-07 | 5 |
developing mesenchymal condensation | 3.25e-07 | 5 |
pre-cartilage condensation | 3.25e-07 | 5 |
cartilaginous condensation | 3.25e-07 | 5 |
cartilage element | 3.25e-07 | 5 |
post-cranial axial skeletal system | 3.25e-07 | 5 |
vertebral column | 3.25e-07 | 5 |
intervertebral disk | 3.25e-07 | 5 |
intervertebral joint | 3.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.58e-07 | 5 |
myotonic disease | 9.58e-07 | 5 |
muscle tissue disease | 9.58e-07 | 5 |
myopathy | 9.58e-07 | 5 |
muscular disease | 9.58e-07 | 5 |
myotonic dystrophy | 9.58e-07 | 5 |