FFCP PHASE1:Hg19::chr19:531750..531767,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:531750..531767,+ to FFCP PHASE1:Hg19::chr19:531750..531767,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=997 | |EntrezGene=997 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1734 | |HGNC=1734 | ||
|TSSclassifier=strong | |||
|UniProt=P49427 | |UniProt=P49427 | ||
|association_with_transcript=17bp_to_ENST00000215574,NM_004359,uc002lov.2_5end | |||
|cluster_id=chr19:531750..531767,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_CDC34_5end | |||
|id=chr19:531750..531767,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.82e-08!254;CL:0002321!1.17e-07!248;CL:0000220!1.84e-07!246 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.02e-08,253;CL:0002321,7.03e-08,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!4.43e-18!194;UBERON:0000483!4.93e-15!309;UBERON:0004111!1.53e-14!241;UBERON:0000119!2.16e-14!312;UBERON:0000468!3.01e-13!659;UBERON:0003914!1.22e-12!118;UBERON:0000922!7.53e-12!612;UBERON:0000467!1.13e-10!625;UBERON:0000480!2.07e-10!626;UBERON:0002050!2.15e-10!605;UBERON:0005423!2.15e-10!605;UBERON:0001981!2.53e-10!60;UBERON:0007500!2.53e-10!60;UBERON:0004537!2.53e-10!60;UBERON:0006965!2.53e-10!60;UBERON:0000923!3.39e-10!604;UBERON:0005291!3.39e-10!604;UBERON:0006598!3.39e-10!604;UBERON:0002532!3.39e-10!604;UBERON:0000477!8.27e-10!286;UBERON:0001009!8.44e-10!113;UBERON:0001637!2.46e-09!42;UBERON:0003509!2.46e-09!42;UBERON:0004572!2.46e-09!42;UBERON:0004535!2.51e-09!110;UBERON:0000055!4.93e-09!69;UBERON:0000481!2.73e-08!347;UBERON:0004872!3.21e-08!84;UBERON:0000475!7.41e-08!365;UBERON:0000490!7.80e-08!138;UBERON:0002049!1.14e-07!79;UBERON:0007798!1.14e-07!79;UBERON:0000064!5.50e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000490;1.92e-07;33!UBERON:0001637;4.26e-07;42!UBERON:0003509;4.26e-07;42!UBERON:0004572;4.26e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,8.58e-18,192;UBERON:0000483,2.00e-15,306;UBERON:0000119,9.02e-15,309;UBERON:0004111,1.59e-14,240;UBERON:0003914,1.50e-12,117;UBERON:0000922,3.54e-11,592;UBERON:0007500,3.95e-10,59;UBERON:0001981,3.95e-10,59;UBERON:0004537,3.95e-10,59;UBERON:0006965,3.95e-10,59;UBERON:0001009,1.27e-09,112;UBERON:0001637,2.46e-09,42;UBERON:0003509,2.46e-09,42;UBERON:0004572,2.46e-09,42;UBERON:0005423,2.87e-09,581;UBERON:0004535,3.76e-09,109;UBERON:0000055,7.56e-09,68;UBERON:0004872,4.81e-08,83;UBERON:0002050,1.40e-07,564;UBERON:0002049,1.70e-07,78;UBERON:0007798,1.70e-07,78;UBERON:0000923,4.28e-07,560;UBERON:0010316,4.28e-07,560;UBERON:0005291,4.28e-07,560;UBERON:0006598,4.28e-07,560;UBERON:0010317,4.28e-07,560;UBERON:0002532,4.28e-07,560;UBERON:0010371,5.45e-07,104;UBERON:0003075,8.25e-07,82;UBERON:0007284,8.25e-07,82;UBERON:0000490,9.68e-07,148;UBERON:0002346,9.84e-07,86 | |||
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| ||
|short_description=p2@CDC34 | |||
}} | }} |
Latest revision as of 17:52, 19 September 2015
Short description: | p2@CDC34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDC34_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 17bp_to_ENST00000215574, NM_004359, uc002lov.2_5end |
EntrezGene: | CDC34 |
HGNC: | 1734 |
UniProt: | P49427 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.02e-08 | 253 |
embryonic cell | 7.03e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
tube | 8.58e-18 | 192 |
epithelium | 2.00e-15 | 306 |
cell layer | 9.02e-15 | 309 |
anatomical conduit | 1.59e-14 | 240 |
epithelial tube | 1.50e-12 | 117 |
embryo | 3.54e-11 | 592 |
epithelial tube open at both ends | 3.95e-10 | 59 |
blood vessel | 3.95e-10 | 59 |
blood vasculature | 3.95e-10 | 59 |
vascular cord | 3.95e-10 | 59 |
circulatory system | 1.27e-09 | 112 |
artery | 2.46e-09 | 42 |
arterial blood vessel | 2.46e-09 | 42 |
arterial system | 2.46e-09 | 42 |
developing anatomical structure | 2.87e-09 | 581 |
cardiovascular system | 3.76e-09 | 109 |
vessel | 7.56e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 4.81e-08 | 83 |
embryonic structure | 1.40e-07 | 564 |
vasculature | 1.70e-07 | 78 |
vascular system | 1.70e-07 | 78 |
germ layer | 4.28e-07 | 560 |
germ layer / neural crest | 4.28e-07 | 560 |
embryonic tissue | 4.28e-07 | 560 |
presumptive structure | 4.28e-07 | 560 |
germ layer / neural crest derived structure | 4.28e-07 | 560 |
epiblast (generic) | 4.28e-07 | 560 |
ecto-epithelium | 5.45e-07 | 104 |
neural plate | 8.25e-07 | 82 |
presumptive neural plate | 8.25e-07 | 82 |
unilaminar epithelium | 9.68e-07 | 148 |
neurectoderm | 9.84e-07 | 86 |