FFCP PHASE1:Hg19::chr1:153003671..153003687,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:153003671..153003687,+ to FFCP PHASE1:Hg19::chr1:153003671..153003687,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6699 | |EntrezGene=6699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11260 | |HGNC=11260 | ||
|TSSclassifier=strong | |||
|UniProt=P22528 | |UniProt=P22528 | ||
|association_with_transcript=0bp_to_ENST00000307098,NM_003125,uc001fba.2_5end | |||
|cluster_id=chr1:153003671..153003687,+ | |||
|coexpression_cluster_id=C1778 | |||
|description=CAGE_peak_1_at_SPRR1B_5end | |||
|id=chr1:153003671..153003687,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.49e-19!43;CL:0000066!1.08e-16!254;CL:0002368!7.37e-13!13;CL:0000223!1.62e-12!59;CL:0002251!7.40e-11!21;CL:0002159!5.94e-10!13;CL:0002202!1.88e-08!9;CL:0002632!1.88e-08!9;CL:0000622!6.85e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.04e-16;42!CL:0002251;9.04e-14;20!CL:0002368;2.91e-12;13!CL:0002159;7.86e-12;14!CL:0000622;7.79e-10;5!CL:0000154;4.50e-08;6!CL:0000244;6.40e-08;4!CL:0000731;6.40e-08;4!CL:0000453;1.74e-07;5!CL:0002077;3.17e-07;34!CL:0002202;6.67e-07;9!CL:0002632;6.67e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.57e-21,42;CL:0000066,1.49e-18,253;CL:0000223,3.10e-14,58;CL:0002251,9.85e-14,20;CL:0002368,2.93e-12,13;CL:0002159,7.87e-12,14;CL:0000622,7.79e-10,5;CL:0002077,2.99e-08,34;CL:0000154,4.50e-08,6;CL:0000244,6.41e-08,4;CL:0000731,6.41e-08,4;CL:0000453,1.67e-07,5;CL:0000076,6.34e-07,63;CL:0002202,6.71e-07,9;CL:0002632,6.71e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;6.15e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!1.68e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.04e-16;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,5.23e-16,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.61e-15!169;UBERON:0000925!1.61e-15!169;UBERON:0006595!1.61e-15!169;UBERON:0001004!6.60e-15!72;UBERON:0000161!4.30e-11!35;UBERON:0000464!3.34e-10!104;UBERON:0000166!3.82e-10!21;UBERON:0000065!9.91e-10!53;UBERON:0001007!1.10e-09!155;UBERON:0001555!1.10e-09!155;UBERON:0007026!1.10e-09!155;UBERON:0003102!2.50e-09!95;UBERON:0000077!5.03e-09!130;UBERON:0005181!8.98e-09!35;UBERON:0000165!1.20e-08!28;UBERON:0000930!1.20e-08!28;UBERON:0005178!3.89e-08!34;UBERON:0002224!3.89e-08!34;UBERON:0000466!6.84e-08!126;UBERON:0007196!9.37e-08!14;UBERON:0001558!9.37e-08!14;UBERON:0000365!2.00e-07!5;UBERON:0001008!3.19e-07!45;UBERON:0005911!5.33e-07!82;UBERON:0000974!5.61e-07!10;UBERON:0000062!8.45e-07!511;UBERON:0006554!9.68e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;8.43e-11;19!UBERON:0000166;8.43e-11;19!UBERON:0000165;9.60e-11;28!UBERON:0000365;3.17e-09;5!UBERON:0000974;4.05e-09;6!UBERON:0000486;9.27e-09;12!UBERON:0000344;3.95e-08;20!UBERON:0005910;1.41e-07;6!UBERON:0003729;3.17e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.15e-14,160;UBERON:0000925,6.15e-14,160;UBERON:0006595,6.15e-14,160;UBERON:0001004,1.01e-13,74;UBERON:0000166,8.89e-13,22;UBERON:0000161,2.70e-12,36;UBERON:0003102,2.71e-12,99;UBERON:0000153,1.64e-10,62;UBERON:0007811,1.64e-10,62;UBERON:0000165,3.29e-10,29;UBERON:0000930,3.29e-10,29;UBERON:0000365,3.15e-09,5;UBERON:0000974,6.58e-09,10;UBERON:0000033,3.31e-08,56;UBERON:0000344,4.09e-08,20;UBERON:0001007,1.20e-07,145;UBERON:0001555,1.20e-07,145;UBERON:0007026,1.20e-07,145;UBERON:0005910,1.40e-07,6;UBERON:0000065,1.68e-07,54;UBERON:0001008,1.90e-07,48;UBERON:0004923,3.30e-07,66;UBERON:0003729,3.32e-07,13;UBERON:0001444,4.94e-07,49;UBERON:0006554,6.97e-07,47;UBERON:0005631,7.79e-07,14;UBERON:0000158,7.79e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0.737201809504527,16.7472280313383,1.74753097704138,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,2.01260960310899,1529.91691753293,662.351815393372,712.5159775914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.3779651843358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,1.75669571386252,14.145740153753,4808.69780546156,6266.62786749964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19655851793353,0,0,0,0,0.112611480483322,0,0,0,0,0,4249.30044407685,0,0,0,0,16.6694139633228,2.24271040056923,0,0,0,0,0,0,0,0,0,31.3759501849447,0,0.469737994575059,3.39933183173076,1.12360645361799,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,2521.08782951521,1900.49496827694,641.008270694424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2270.18465367742,2511.05516777522,1162.11492107845,275.913566572418,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,525.846808665819,11.926731102119,465.022318955028,200.163298240866,317.953528734274,152.586306307754,0,0,0,0,0.12624243342638,21.9067735307983,0,0,39.3466625852222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,6.2083842775503,0,0.368738337083406,0,0,0,0,0,0,4.85004114314015,1.66435439510497,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,22.6572311442712,1492.63283065088,0,0,2.22911505431021,4.96319574198153,1.77135275340154,0.784349769176855,1.46139224653261,0.422206515571503,0,0,1.29549549661284,0,0,0,2.54876273045038,7.47968408035852,0,0,0,0,0,0,0.309123034943167,0,0,2411.91525958392,5473.50727162751,0,0,0,0,0,0,0,2.13066568540252,0,731.220465556967,262.147251886005,52.7040502602632,556.671268048091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06031162111118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.4483508745835,0,0,0,0,0,0.844430541190656,0,0,0,550.005596339027,568.416329654348,289.650019731118,0.0941438007767792,258.303223602738,2265.94134772956,5937.52975585609,274.749186647524,0,0,0,0,0,0,0,0,0,0,3.92064345569651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,50.6138307643903,1.48482340416319,82.9333895667927,0,0,0,0,0,3.18796781201712,0,0,0,0,0,0.179736702294654,2.50629644545853,0,0.986434056369336,0,0,0,0,0,0,0,0,2.61724931056649,0.254253650292766,0.945550727071745,0,0,0,0,0,0,0,0,0,0,2587.70469381088,1320.31253540815,0,0,0,0,18.5020672644513,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,3.13063390291344,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,320.631124339844,2.00236175134926,0.52418000472609,0,0,0,0,2046.0802918397,0,10.169133335124,0,0,0.126621591911757,4.69323318563527,0.64127056201227,2.77488893161158,4.59562102038899,0.144090417154106,0,0,0,0,47.8458890272095,0,0,0,0,0,0,0,0,0,0,0,0,2.1964690054889,0,0,2.68733889946905,0,0,0,0,0,0,0,0,0,0,0,0,36.4457704313431,27.0830684095282,0,1600.3588945361,0,0.0524545881349981,0,0,4.2221343410278,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0.414239055347196,0,0,0,88.7294348300553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.76871389777248,2.39156712564054,3.59843867362857,0,0,43.9529216585944,0,0,0,0,0,1986.28900961611,806.212129002733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,41.9090757999379,9.90945676121019,292.385186043556,1.03973099535304,0,0,0,0.0752103283492573,0,0,0,0,2.06998520703863,0,0,0,0,0,0,108.670248067255,0,3.06629826335029,0,0,0.606965604236632,0,5.76565406057152,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,183.800737612614,907.19798727725,6851.76576790128,36.1390981409033,0,0,0,0,0,0,0,0,9.02192644868794,2.58971534875158,0,0,289.969462856306,0,0,0.475680363110274,0,0,0,0,0.655678681511872,0,0,0,0,0,4.226557275834,0,0,0.0644578879735772,0,22.4977962643129,618.271815245892,4.97496473472843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.151557396436479,0.267964130156178,0,0,281.895324073097,4.04709533488359,8.84868064753284,28.9888915761656,0,0.25458863311266,0.202117188958219,7830.61827161001,3380.23831481932,2377.99893578604,665.797232660215,72.5199577270309,39.8061983507665,0,0,0,98.5491958094508,133.609898491873,1540.10203492507,1.33151354837103,3.42165449104745,0 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| ||
|short_description=p1@SPRR1B | |||
}} | }} |
Latest revision as of 04:26, 17 September 2015
Short description: | p1@SPRR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPRR1B_5end |
Coexpression cluster: | C1778_tongue_Corneal_Urothelial_salivary_Esophageal_Sebocyte_Keratinocyte |
Association with transcript: | 0bp_to_ENST00000307098, NM_003125, uc001fba.2_5end |
EntrezGene: | SPRR1B |
HGNC: | 11260 |
UniProt: | P22528 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.57e-21 | 42 |
epithelial cell | 1.49e-18 | 253 |
endodermal cell | 3.10e-14 | 58 |
epithelial cell of alimentary canal | 9.85e-14 | 20 |
respiratory epithelial cell | 2.93e-12 | 13 |
general ecto-epithelial cell | 7.87e-12 | 14 |
acinar cell | 7.79e-10 | 5 |
ecto-epithelial cell | 2.99e-08 | 34 |
protein secreting cell | 4.50e-08 | 6 |
transitional epithelial cell | 6.41e-08 | 4 |
urothelial cell | 6.41e-08 | 4 |
Langerhans cell | 1.67e-07 | 5 |
squamous epithelial cell | 6.34e-07 | 63 |
epithelial cell of tracheobronchial tree | 6.71e-07 | 9 |
epithelial cell of lower respiratory tract | 6.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.15e-14 | 160 |
endoderm | 6.15e-14 | 160 |
presumptive endoderm | 6.15e-14 | 160 |
respiratory system | 1.01e-13 | 74 |
oral opening | 8.89e-13 | 22 |
orifice | 2.70e-12 | 36 |
surface structure | 2.71e-12 | 99 |
anterior region of body | 1.64e-10 | 62 |
craniocervical region | 1.64e-10 | 62 |
mouth | 3.29e-10 | 29 |
stomodeum | 3.29e-10 | 29 |
urothelium | 3.15e-09 | 5 |
neck | 6.58e-09 | 10 |
head | 3.31e-08 | 56 |
mucosa | 4.09e-08 | 20 |
digestive system | 1.20e-07 | 145 |
digestive tract | 1.20e-07 | 145 |
primitive gut | 1.20e-07 | 145 |
transitional epithelium | 1.40e-07 | 6 |
respiratory tract | 1.68e-07 | 54 |
renal system | 1.90e-07 | 48 |
organ component layer | 3.30e-07 | 66 |
mouth mucosa | 3.32e-07 | 13 |
subdivision of head | 4.94e-07 | 49 |
urinary system structure | 6.97e-07 | 47 |
extraembryonic membrane | 7.79e-07 | 14 |
membranous layer | 7.79e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 5.23e-16 | 14 |