FFCP PHASE1:Hg19::chr1:234743940..234743975,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:234743940..234743975,- to FFCP PHASE1:Hg19::chr1:234743940..234743975,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=359948 | |EntrezGene=359948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21729 | |HGNC=21729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_uc009xfw.2_5end | |||
|cluster_id=chr1:234743940..234743975,- | |||
|description=CAGE_peak_2_at_IRF2BP2_5end | |||
|id=chr1:234743940..234743975,- | |||
|ontology_enrichment_celltype=CL:0000766!7.36e-26!76;CL:0000839!9.73e-24!70;CL:0000557!7.43e-23!71;CL:0000763!8.87e-23!112;CL:0000049!8.87e-23!112;CL:0002057!6.68e-21!42;CL:0002009!3.42e-20!65;CL:0002194!1.37e-19!63;CL:0000576!1.37e-19!63;CL:0000040!1.37e-19!63;CL:0000559!1.37e-19!63;CL:0000860!5.57e-18!45;CL:0000037!8.75e-14!172;CL:0000566!8.75e-14!172;CL:0000988!1.49e-12!182;CL:0002032!2.78e-12!165;CL:0000837!2.78e-12!165;CL:0000738!3.84e-12!140;CL:0002031!3.61e-11!124;CL:0002087!1.97e-08!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.37e-19;33!CL:0002057;8.37e-19;33!CL:0000576;6.28e-15;48!CL:0000473;3.18e-14;39!CL:0000234;3.18e-14;39!CL:0000766;3.07e-13;69!CL:0000763;9.03e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.46e-30,72;CL:0000839,1.61e-27,66;CL:0000557,1.72e-26,67;CL:0000763,3.11e-26,108;CL:0000049,3.11e-26,108;CL:0002009,1.12e-23,61;CL:0002194,4.61e-23,59;CL:0000576,4.61e-23,59;CL:0000040,4.61e-23,59;CL:0000559,4.61e-23,59;CL:0000860,2.92e-21,42;CL:0002057,2.92e-21,42;CL:0000473,2.03e-19,48;CL:0000234,2.03e-19,48;CL:0000037,1.26e-16,168;CL:0000988,2.49e-15,177;CL:0002032,7.29e-15,161;CL:0000837,7.29e-15,161;CL:0000738,9.12e-15,136;CL:0002031,2.26e-13,120;CL:0002087,2.25e-10,115;CL:0000048,8.66e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.42e-16;42!CL:0000049;7.43e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.97e-21!80;UBERON:0001474!1.43e-18!86;UBERON:0002405!1.10e-17!115;UBERON:0002193!2.53e-17!112;UBERON:0002390!5.14e-17!102;UBERON:0003061!5.14e-17!102;UBERON:0004765!6.63e-17!101;UBERON:0001434!6.63e-17!101;UBERON:0002204!2.17e-13!167;UBERON:0003081!6.25e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.70e-25,76;UBERON:0004765,1.25e-22,90;UBERON:0001474,1.07e-21,82;UBERON:0002405,1.61e-21,93;UBERON:0001434,2.98e-19,100;UBERON:0002193,6.89e-19,108;UBERON:0002390,7.32e-19,98;UBERON:0003061,7.32e-19,98;UBERON:0002204,3.87e-15,167;UBERON:0003081,5.38e-13,203 | |||
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| ||
|short_description=p2@IRF2BP2 | |||
}} | }} |
Latest revision as of 10:29, 16 September 2015
Short description: | p2@IRF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IRF2BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -80bp_to_uc009xfw.2_5end |
EntrezGene: | IRF2BP2 |
HGNC: | 21729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.46e-30 | 72 |
myeloid lineage restricted progenitor cell | 1.61e-27 | 66 |
granulocyte monocyte progenitor cell | 1.72e-26 | 67 |
myeloid cell | 3.11e-26 | 108 |
common myeloid progenitor | 3.11e-26 | 108 |
macrophage dendritic cell progenitor | 1.12e-23 | 61 |
monopoietic cell | 4.61e-23 | 59 |
monocyte | 4.61e-23 | 59 |
monoblast | 4.61e-23 | 59 |
promonocyte | 4.61e-23 | 59 |
classical monocyte | 2.92e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.92e-21 | 42 |
defensive cell | 2.03e-19 | 48 |
phagocyte | 2.03e-19 | 48 |
hematopoietic stem cell | 1.26e-16 | 168 |
hematopoietic cell | 2.49e-15 | 177 |
hematopoietic oligopotent progenitor cell | 7.29e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.29e-15 | 161 |
leukocyte | 9.12e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 2.26e-13 | 120 |
nongranular leukocyte | 2.25e-10 | 115 |
multi fate stem cell | 8.66e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.70e-25 | 76 |
skeletal element | 1.25e-22 | 90 |
bone element | 1.07e-21 | 82 |
immune system | 1.61e-21 | 93 |
skeletal system | 2.98e-19 | 100 |
hemolymphoid system | 6.89e-19 | 108 |
hematopoietic system | 7.32e-19 | 98 |
blood island | 7.32e-19 | 98 |
musculoskeletal system | 3.87e-15 | 167 |
lateral plate mesoderm | 5.38e-13 | 203 |