FFCP PHASE1:Hg19::chr1:241576976..241576987,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:241576976..241576987,+ | |||
|coexpression_cluster_id=C1853 | |||
|description=CAGE_peak_at_chr1:241576976..241576987,+ | |||
|id=chr1:241576976..241576987,+ | |||
|ontology_enrichment_celltype=CL:0002551!5.13e-15!6;CL:0000057!9.43e-14!75;CL:0002556!9.11e-11!6;CL:0000197!4.01e-10!6;CL:0000098!4.01e-10!6;CL:0002167!4.01e-10!6;CL:0000055!1.67e-09!180;CL:0002620!5.75e-09!23;CL:0002552!4.26e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002552;1.34e-26;5!CL:0000222;9.28e-16;1!CL:0002550;2.38e-15;1!CL:0002363;2.48e-08;2!CL:0000057;8.19e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,1.40e-26,5;CL:0002550,2.38e-15,1;CL:0000057,2.84e-11,76;CL:0002363,2.00e-08,2;CL:0000008,2.00e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.48e-08;2 | |||
|ontology_enrichment_disease=DOID:3093!8.90e-08!11 | |||
|ontology_enrichment_disease_v019=DOID:2513;2.38e-15;1!DOID:4231;2.48e-08;2!DOID:3451;2.48e-08;2!DOID:4159;2.48e-08;2!DOID:0060122;2.48e-08;2!DOID:1907;2.48e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,2.06e-15,1;DOID:3451,2.31e-08,2;DOID:4159,2.31e-08,2;DOID:0060122,2.31e-08,2;DOID:4231,3.08e-08,2;DOID:1907,3.08e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001758!9.11e-11!6;UBERON:0003672!9.11e-11!6;UBERON:0002067!6.32e-10!9;UBERON:0004016!6.32e-10!9;UBERON:0010083!6.32e-10!9;UBERON:0003102!6.69e-10!95;UBERON:0000075!3.55e-07!13;UBERON:0005944!3.55e-07!13;UBERON:0004288!3.55e-07!13;UBERON:0003089!3.55e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001828;6.84e-17;8!UBERON:0003729;1.25e-10;13!UBERON:0000165;1.47e-08;28!UBERON:0003566;2.48e-08;2!UBERON:0001777;2.48e-08;2!UBERON:0000161;1.93e-07;19!UBERON:0000166;1.93e-07;19!UBERON:0000344;4.29e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001828,7.03e-17,8;UBERON:0003729,1.27e-10,13;UBERON:0003102,1.74e-08,99;UBERON:0003566,2.00e-08,2;UBERON:0001777,2.00e-08,2;UBERON:0000165,2.88e-08,29;UBERON:0000930,2.88e-08,29;UBERON:0001444,2.44e-07,49;UBERON:0000344,4.34e-07,20 | |||
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| ||
|short_description=p@chr1:241576976..241576987,+ | |||
}} | }} |
Latest revision as of 05:43, 28 July 2015
Short description: | p@chr1:241576976..241576987, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:241576976..241576987, + |
Coexpression cluster: | C1853_Fibroblast_cerebellum_Olfactory_basal_mesodermal_Keratocytes_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 1.40e-26 | 5 |
fibroblast of the conjuctiva | 2.38e-15 | 1 |
fibroblast | 2.84e-11 | 76 |
keratocyte | 2.00e-08 | 2 |
migratory cranial neural crest cell | 2.00e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
gingiva | 7.03e-17 | 8 |
mouth mucosa | 1.27e-10 | 13 |
surface structure | 1.74e-08 | 99 |
head connective tissue | 2.00e-08 | 2 |
substantia propria of cornea | 2.00e-08 | 2 |
mouth | 2.88e-08 | 29 |
stomodeum | 2.88e-08 | 29 |
subdivision of head | 2.44e-07 | 49 |
mucosa | 4.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 2.06e-15 | 1 |
skin carcinoma | 2.31e-08 | 2 |
skin cancer | 2.31e-08 | 2 |
integumentary system cancer | 2.31e-08 | 2 |
histiocytoma | 3.08e-08 | 2 |
malignant fibroxanthoma | 3.08e-08 | 2 |