FFCP PHASE1:Hg19::chr1:89591731..89591740,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:89591731..89591740,- to FFCP PHASE1:Hg19::chr1:89591731..89591740,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2634 | |EntrezGene=2634 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4183 | |HGNC=4183 | ||
|TSSclassifier=strong | |||
|UniProt=P32456 | |UniProt=P32456 | ||
|association_with_transcript=56bp_to_ENST00000370466_5end | |||
|cluster_id=chr1:89591731..89591740,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_GBP2_5end | |||
|id=chr1:89591731..89591740,- | |||
|ontology_enrichment_celltype=CL:0002057!8.60e-30!42;CL:0000860!6.52e-29!45;CL:0000738!3.30e-25!140;CL:0002087!3.47e-22!119;CL:0000766!2.42e-21!76;CL:0002031!6.78e-20!124;CL:0002009!8.81e-19!65;CL:0002194!2.78e-18!63;CL:0000576!2.78e-18!63;CL:0000040!2.78e-18!63;CL:0000559!2.78e-18!63;CL:0000557!1.19e-16!71;CL:0000037!4.10e-16!172;CL:0000566!4.10e-16!172;CL:0000839!1.45e-15!70;CL:0002032!4.71e-15!165;CL:0000837!4.71e-15!165;CL:0000988!2.78e-13!182;CL:0000763!1.23e-10!112;CL:0000049!1.23e-10!112;CL:0000791!1.66e-09!18;CL:0000789!1.66e-09!18;CL:0002420!1.66e-09!18;CL:0002419!1.66e-09!18;CL:0000790!1.66e-09!18;CL:0000084!3.81e-08!25;CL:0000827!3.81e-08!25;CL:0002393!9.45e-07!9;CL:0002397!9.45e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-36;33!CL:0002057;1.16e-36;33!CL:0000576;1.61e-25;48!CL:0000473;2.25e-24;39!CL:0000234;2.25e-24;39!CL:0000766;3.03e-18;69!CL:0000791;1.75e-14;18!CL:0000789;1.75e-14;18!CL:0002419;1.75e-14;18!CL:0002087;2.06e-13;104!CL:0000084;1.57e-11;25!CL:0000094;4.78e-10;8!CL:0000738;3.75e-09;136!CL:0000625;5.17e-09;11!CL:0002393;1.38e-07;6!CL:0002397;1.38e-07;6!CL:0000763;6.20e-07;100!CL:0000081;9.92e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.24e-49,42;CL:0002057,2.24e-49,42;CL:0000473,4.97e-41,48;CL:0000234,4.97e-41,48;CL:0000738,6.07e-41,136;CL:0002087,6.13e-36,115;CL:0000766,1.47e-35,72;CL:0002031,1.24e-32,120;CL:0002009,1.03e-29,61;CL:0002194,1.81e-29,59;CL:0000576,1.81e-29,59;CL:0000040,1.81e-29,59;CL:0000559,1.81e-29,59;CL:0000037,7.95e-28,168;CL:0000557,2.74e-27,67;CL:0002032,2.92e-27,161;CL:0000837,2.92e-27,161;CL:0000839,2.44e-26,66;CL:0000988,4.82e-25,177;CL:0000763,1.19e-19,108;CL:0000049,1.19e-19,108;CL:0000791,5.65e-15,18;CL:0000789,5.65e-15,18;CL:0002420,5.65e-15,18;CL:0002419,5.65e-15,18;CL:0000790,5.65e-15,18;CL:0000084,6.02e-12,25;CL:0000827,6.02e-12,25;CL:0002393,2.45e-10,9;CL:0002397,2.45e-10,9;CL:0000094,3.83e-10,8;CL:0000625,3.05e-09,11;CL:0000134,4.70e-08,354;CL:0000838,1.06e-07,52;CL:0002320,1.94e-07,361;CL:0000542,2.00e-07,53;CL:0000051,2.00e-07,53;CL:0000048,3.05e-07,427;CL:0000081,8.52e-07,11;CL:0000723,8.85e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.86e-35;42!CL:0000790;1.75e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.09e-20!112;UBERON:0002390!9.50e-19!102;UBERON:0003061!9.50e-19!102;UBERON:0002405!5.21e-16!115;UBERON:0002371!6.52e-13!80;UBERON:0001474!4.14e-11!86;UBERON:0003081!5.45e-09!216;UBERON:0004765!9.75e-08!101;UBERON:0001434!9.75e-08!101;UBERON:0007023!2.51e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.01e-09;15!UBERON:0000179;2.01e-09;15!UBERON:0000463;2.01e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.69e-31,108;UBERON:0002390,4.66e-30,98;UBERON:0003061,4.66e-30,98;UBERON:0002405,2.54e-23,93;UBERON:0002371,3.60e-22,76;UBERON:0001474,2.05e-19,82;UBERON:0004765,2.36e-16,90;UBERON:0001434,2.81e-13,100;UBERON:0003081,3.88e-13,203;UBERON:0000178,2.88e-09,15;UBERON:0000179,2.88e-09,15;UBERON:0000463,2.88e-09,15;UBERON:0002204,1.07e-07,167;UBERON:0002384,3.31e-07,371 | |||
|phase1_expression=0,0.856402095563933,0.422863212287913,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,2.01697543935533,1.80808358407193,1.46062018077475,1.95173119516203,0.123121058076788,0,0,0.572471974262113,0.410623275218653,0,0.0764134057479513,0,0,3.14691421479123,2.68680578668049,1.70297735647684,0,0,0,0,0,0.293600439334847,9.97191735357379,14.4392002178502,13.6716848550987,0,0.32389366601898,0,7.26991193897824,3.77875943688809,6.0646015296954,19.2916100631718,10.6903650885675,15.7950249156503,73.3615600421484,58.9169625016931,76.1472780241244,35.5088051158717,16.1371170895957,20.3139729891513,9.97684399575805,5.45812300115692,10.562003768919,28.159718098123,17.6510964891852,24.2948107803636,47.4985872268871,42.0868317581643,41.770025552204,55.139755339431,24.397564661719,36.1236904417433,67.8371396193207,48.4979114130787,62.9847649644838,41.1671661790691,31.6718766949306,42.7224223045194,3.38008458099107,5.10250319916104,1.46761051855863,1.34794357375794,2.55300717830561,3.2145117339416,2.85012743741249,2.98375015798635,4.56660384411585,0,1.09227722252426,0,0.426730222566507,0,0,1.98313461835459,0,0.569212969109448,1.17447437874188,0.764546456250458,0,4.48406850385229,0.263384084775077,1.7703879310245,3.93010762749165,3.28962398399215,3.8452893939856,2.28145586643513,3.31413464014313,0,3.67654507721073,2.94605907474837,4.87374568083967,8.12411591295047,3.97083091149593,4.94225520727537,3.12432018746985,1.65810010671509,4.92665245749589,1.18629250529648,0,0,2.94604291013672,2.29932296161153,2.74901956386104,3.28925599625354,1.59282707162048,1.30216690771284,1.90090408889675,2.86092726247768,1.79181255616186,2.49861453104692,2.60454977248419,3.28451198768419,1.41124720257313,1.33720097891754,1.59306844271079,2.43806866313962,0,0.255725123687061,0,1.50401373190767,0.289693037921647,0,0.486634870302636,0.661743720148475,0.443458794925128,0.263504357079378,0.851363990735132,0,0,0,0.348259474598534,0.398873881556595,0.476981248610684,0.571994910780128,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0,0,0.208994966536811,1.03366703667732,1.42306505074684,0.33472061276467,1.61131726843659,0.760272105718513,1.46437234528902,0,0.81014194788176,0.714397826272638,0.673588117878509,0.450445921933289,0,0.949265659568129,0.549605231791222,15.8136500923276,50.4114343392823,0,0,0,0.397227542439656,0,0,0.560677600142307,0,0,0.311211035399766,0.67355336034844,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0.877955241761676,0,0.150238058906597,0.226864366320042,0.538168907066586,0,0.211931901159562,0.300091096084402,0.206105058476878,1.28820270022815,0,0.168776332241266,0.194874010322397,3.02920529092937,0.0920498986422993,2.10139873864455,2.13005755509969,1.41052937518696,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,1.56449532329816,1.28648187638577,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,3.80265104465493,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,5.05282567163758,3.24089858803628,4.56609965363036,0,0,0.246217006087397,0.468008530278475,0,0,0,0,0,0,0,31.0377839874444,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,3.72313363218819,3.12022310734098,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.80863626235752,0,0.099972991182057,0,0.502257091432126,0,0,0,0,0,0,0.179060963239896,1.79336230389644,1.57624608161542,1.2937654491571,2.05348858047597,0,1.30139853857622,0,0,0.637938751653163,35.2033301255176,44.8742188806037,46.414537504836,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,1.03384013061444,2.5885704098234,5.12292277456533,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0,0.200506470303285,0,1.03333003348146,0,1.04899531967539,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0.247528499761764,0,0,0,0.386682873168488,0,0,0.137836572484531,0.322260734604821,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,1.54016790088044,0,0,0.37064843820784,0,0,0,0.190630193923825,0,0.42793898803392,0.318203247925937,0.78494864019923,0.179872457583315,0.823611089208164,0.117812402345686,0,1.58510321173008,0,0.48763373908959,0.487426979262569,0,3.13949796238367,0.989838023675989,0,0,0.66343897524122,1.31535265576129,0,0,0.405820753925408,0,0,0,0,0,0,0.633322905892992,0,0,0,0,0,0,0.753150406214233,0,0,0,0,9.64150457541122,4.58782324285425,6.26611905891579,2.38231775457789,2.05681136543097,6.48473311192717,8.64050299580984,1.58625035258854,0,0,0.245040215981032,0,0,0,0,0.199579371432817,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,1.02555725490326,0,0.445773537109913,0,0,1.18785872333055,1.53580351049616,0.994147647766298,0.703347082052564,0.667852230137435,0.988823245360557,0,1.79323189425963,0.276283915531148,0,2.147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| ||
|short_description=p2@GBP2 | |||
}} | }} |
Latest revision as of 16:37, 19 September 2015
Short description: | p2@GBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GBP2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 56bp_to_ENST00000370466_5end |
EntrezGene: | GBP2 |
HGNC: | 4183 |
UniProt: | P32456 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.69e-31 | 108 |
hematopoietic system | 4.66e-30 | 98 |
blood island | 4.66e-30 | 98 |
immune system | 2.54e-23 | 93 |
bone marrow | 3.60e-22 | 76 |
bone element | 2.05e-19 | 82 |
skeletal element | 2.36e-16 | 90 |
skeletal system | 2.81e-13 | 100 |
lateral plate mesoderm | 3.88e-13 | 203 |
blood | 2.88e-09 | 15 |
haemolymphatic fluid | 2.88e-09 | 15 |
organism substance | 2.88e-09 | 15 |
musculoskeletal system | 1.07e-07 | 167 |
connective tissue | 3.31e-07 | 371 |