FFCP PHASE1:Hg19::chr20:1099233..1099315,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:1099233..1099315,+ to FFCP PHASE1:Hg19::chr20:1099233..1099315,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9491 | |EntrezGene=9491 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9571 | |HGNC=9571 | ||
|TSSclassifier=strong | |||
|UniProt=Q5QPM7,Q92530,E7ER20 | |UniProt=Q5QPM7,Q92530,E7ER20 | ||
|association_with_transcript=0bp_to_ENST00000246015,ENST00000335877,ENST00000438768,ENST00000461847,ENST00000478004,NM_006814,uc002wem.3,uc002wen.3,uc010zpp.1_5end | |||
|cluster_id=chr20:1099233..1099315,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_PSMF1_5end | |||
|id=chr20:1099233..1099315,+ | |||
|ontology_enrichment_celltype=CL:0000220!4.74e-14!246;CL:0002321!1.23e-13!248;CL:0000066!1.39e-12!254;CL:0000223!6.82e-08!59;CL:0000222!7.99e-08!119;CL:0000076!4.56e-07!62;CL:0000183!6.15e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.09e-13,250;CL:0000066,1.07e-12,253;CL:0000222,7.66e-08,121;CL:0000223,1.16e-07,58;CL:0000076,2.74e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!5.51e-15!238;UBERON:0009142!5.51e-15!238;UBERON:0005256!5.05e-14!143;UBERON:0000119!6.56e-14!312;UBERON:0003914!1.72e-13!118;UBERON:0000481!2.54e-13!347;UBERON:0002100!2.64e-13!216;UBERON:0000483!2.81e-13!309;UBERON:0000490!4.11e-13!138;UBERON:0000475!2.89e-12!365;UBERON:0004119!1.07e-11!169;UBERON:0000925!1.07e-11!169;UBERON:0006595!1.07e-11!169;UBERON:0000477!6.44e-11!286;UBERON:0004111!1.75e-10!241;UBERON:0001007!8.25e-10!155;UBERON:0001555!8.25e-10!155;UBERON:0007026!8.25e-10!155;UBERON:0005911!2.45e-09!82;UBERON:0000077!2.81e-09!130;UBERON:0003929!1.85e-08!54;UBERON:0009569!2.10e-08!113;UBERON:0005177!6.23e-08!107;UBERON:0001009!1.32e-07!113;UBERON:0004535!1.63e-07!110;UBERON:0003102!2.90e-07!95;UBERON:0002365!4.26e-07!31;UBERON:0002330!4.26e-07!31;UBERON:0004872!5.78e-07!84;UBERON:0001048!6.12e-07!168;UBERON:0002530!8.79e-07!59;UBERON:0004921!9.74e-07!129;UBERON:0004185!9.74e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;6.61e-07;31!UBERON:0002330;6.61e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,6.09e-14,309;UBERON:0000490,6.74e-14,148;UBERON:0003914,1.06e-13,117;UBERON:0002100,1.64e-13,199;UBERON:0000483,2.61e-13,306;UBERON:0003104,1.40e-12,160;UBERON:0009142,1.40e-12,160;UBERON:0005256,3.94e-12,122;UBERON:0004119,3.97e-11,160;UBERON:0000925,3.97e-11,160;UBERON:0006595,3.97e-11,160;UBERON:0004111,1.45e-10,240;UBERON:0001007,2.10e-09,145;UBERON:0001555,2.10e-09,145;UBERON:0007026,2.10e-09,145;UBERON:0005911,2.45e-09,82;UBERON:0003929,1.85e-08,54;UBERON:0005177,2.34e-08,101;UBERON:0009569,3.36e-08,112;UBERON:0001009,7.38e-08,112;UBERON:0004535,9.07e-08,109;UBERON:0003102,1.05e-07,99;UBERON:0005423,2.07e-07,581;UBERON:0006554,2.21e-07,47;UBERON:0001008,2.26e-07,48;UBERON:0004872,3.02e-07,83;UBERON:0002365,4.26e-07,31;UBERON:0002330,4.26e-07,31;UBERON:0001048,5.29e-07,160;UBERON:0000922,5.88e-07,592;UBERON:0000055,7.22e-07,68;UBERON:0007500,7.32e-07,59;UBERON:0001981,7.32e-07,59;UBERON:0004537,7.32e-07,59;UBERON:0006965,7.32e-07,59;UBERON:0002530,8.79e-07,59 | |||
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| ||
|short_description=p1@PSMF1 | |||
}} | }} |
Latest revision as of 03:40, 20 September 2015
Short description: | p1@PSMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSMF1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000246015, ENST00000335877, ENST00000438768, ENST00000461847, ENST00000478004, NM_006814, uc002wem.3, uc002wen.3, uc010zpp.1_5end |
EntrezGene: | PSMF1 |
HGNC: | 9571 |
UniProt: | Q5QPM7Q92530E7ER20 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.09e-13 | 250 |
epithelial cell | 1.07e-12 | 253 |
mesodermal cell | 7.66e-08 | 121 |
endodermal cell | 1.16e-07 | 58 |
squamous epithelial cell | 2.74e-07 | 63 |