FFCP PHASE1:Hg19::chr20:6103758..6103773,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:6103758..6103773,- to FFCP PHASE1:Hg19::chr20:6103758..6103773,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55612 | |EntrezGene=55612 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |HGNC=15889 | ||
|TSSclassifier=strong | |||
|UniProt=G3V1L6 | |UniProt=G3V1L6 | ||
|association_with_transcript=-81bp_to_ENST00000536936_5end | |||
|cluster_id=chr20:6103758..6103773,- | |||
|coexpression_cluster_id=C1483 | |||
|description=CAGE_peak_5_at_FERMT1_5end | |||
|id=chr20:6103758..6103773,- | |||
|ontology_enrichment_celltype=CL:0002076!6.27e-15!43;CL:0000223!1.77e-13!59;CL:0002368!8.11e-10!13;CL:0000066!1.61e-09!254;CL:0002251!2.10e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;5.11e-21;13!CL:0002076;6.90e-17;42!CL:0002159;1.43e-15;14!CL:0002202;1.85e-12;9!CL:0002632;1.85e-12;9!CL:0000622;5.10e-11;5!CL:0000244;1.42e-09;4!CL:0000731;1.42e-09;4!CL:0000154;4.10e-09;6!CL:0002621;1.02e-08;3!CL:0002328;3.13e-08;3!CL:0000307;3.44e-08;3!CL:0002166;3.48e-08;3!CL:0002251;1.06e-07;20!CL:0002623;6.06e-07;3!CL:0000362;9.38e-07;9!CL:0000240;9.70e-07;6!CL:0000311;9.70e-07;6!CL:0000079;9.70e-07;6!CL:0000237;9.70e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,6.80e-22,42;CL:0002368,6.56e-21,13;CL:0000223,8.01e-19,58;CL:0002159,1.83e-15,14;CL:0000066,5.28e-15,253;CL:0002202,2.28e-12,9;CL:0002632,2.28e-12,9;CL:0000622,2.55e-11,5;CL:0000244,1.12e-09,4;CL:0000731,1.12e-09,4;CL:0000154,2.32e-09,6;CL:0002621,1.03e-08,3;CL:0002328,3.11e-08,3;CL:0002166,3.50e-08,3;CL:0000068,3.58e-08,3;CL:0000069,3.58e-08,3;CL:0000307,3.58e-08,3;CL:0000377,3.58e-08,3;CL:0002321,8.77e-08,250;CL:0002251,8.87e-08,20;CL:0002077,1.61e-07,34;CL:0002623,3.04e-07,3;CL:0000362,9.26e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;5.21e-10;58!CL:0000377;3.44e-08;3!CL:0000357;9.70e-07;6!CL:0000114;9.70e-07;6 | |||
|ontology_enrichment_disease=DOID:1749!2.69e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.46e-15!169;UBERON:0000925!2.46e-15!169;UBERON:0006595!2.46e-15!169;UBERON:0000481!2.80e-12!347;UBERON:0001007!1.51e-11!155;UBERON:0001555!1.51e-11!155;UBERON:0007026!1.51e-11!155;UBERON:0000475!1.06e-10!365;UBERON:0004921!2.79e-09!129;UBERON:0004185!2.79e-09!129;UBERON:0000161!3.71e-09!35;UBERON:0000467!4.62e-09!625;UBERON:0000480!6.10e-09!626;UBERON:0001004!1.52e-08!72;UBERON:0000922!1.94e-08!612;UBERON:0000923!2.04e-08!604;UBERON:0005291!2.04e-08!604;UBERON:0006598!2.04e-08!604;UBERON:0002532!2.04e-08!604;UBERON:0002050!2.66e-08!605;UBERON:0005423!2.66e-08!605;UBERON:0000483!3.42e-08!309;UBERON:0000077!3.59e-08!130;UBERON:0000064!6.96e-08!219;UBERON:0000119!8.45e-08!312;UBERON:0000033!2.43e-07!123;UBERON:0000468!5.45e-07!659;UBERON:0004121!7.66e-07!169;UBERON:0000153!8.85e-07!129;UBERON:0007811!8.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;9.02e-12;12!UBERON:0000365;1.66e-11;5!UBERON:0001264;1.54e-10;10!UBERON:0005910;1.63e-09;6!UBERON:0001949;1.02e-08;3!UBERON:0002075;1.24e-08;18!UBERON:0004815;3.13e-08;3!UBERON:0002031;3.13e-08;3!UBERON:0007196;5.65e-07;15!UBERON:0001558;5.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.25e-11,5;UBERON:0001264,1.20e-10,10;UBERON:0005910,1.30e-09,6;UBERON:0001949,1.03e-08,3;UBERON:0002075,1.24e-08,18;UBERON:0004815,3.11e-08,3;UBERON:0002031,3.11e-08,3;UBERON:0003102,6.44e-08,99;UBERON:0001004,1.49e-07,74;UBERON:0000033,2.41e-07,56;UBERON:0007196,6.34e-07,15;UBERON:0001558,6.34e-07,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,2.40285509343189,0.791300934685361,0,0,0,0,0,0,0,0,0.313454721478088,0,0.136874425072884,0,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,0,5.51652734687356,9.638589400904,13.3111443660044,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0,0.196468613246569,4.00724817121796,1.11235332835329,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61656431285521,0,0.12663051166458,0.264818361626438,0,0.709336764396714,0.560677600142307,0,0,0,0,0,0,0,0,0.624320153660641,1.1409436430889,0.149448680551801,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,54.4995605920497,19.9104668031309,29.2540687296784,0.487894824518382,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.473227200159376,0.505754070234305,0.964044119533928,0.330881918197182,0.435758888184812,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.491953754172454,0,20.6330536568216,8.99214026060957,30.1586917234893,1.11106134190236,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0.234004265139238,0,9.3733833986777,5.87937448696008,10.2078070014518,31.9723926049168,19.4724738804355,16.8688378832693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0.664225598535437,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0.160853921143607,0,0.616838775210622,0.887808626565635,1.39616165223476,0,1.16210378459959,0.846016147141356,13.2334270400168,17.6795498756921,0.34444334449382,0.182091168006717,0.131124414959424,0.902399225814824,0,0,0,0.316654886678627,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0,0,0,4.59412430396938,3.25030123018261,0,0.193341436584244,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0.178064071293475,12.0657988213514,19.987767005971,8.55005173713714,17.5002960880101,1.39453664789186,0.62962469366128,0.6970372701606,0.616067160352178,1.06461206063404,1.73986598415015,0.55597265731176,0.286249773483982,0.372158369359667,0,0.190630193923825,0.511795582622668,0,0,1.56989728039846,0,0,0.117812402345686,1.61745985258653,0,0.842516912477962,0,0.731140468893853,0,0.409499734223957,0.282810863907425,1.13008116620243,1.65409603063837,0.66343897524122,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,12.6050967670421,4.02181365321472,11.9780083347455,0.376575203107117,3.44404298136984,8.42357378338128,4.43430153536676,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0.649243880549111,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0.37428108081644,0,0,0,1.13654458722565,0.71623345421307,0.296964680832639,0,0,0.422008249231538,0,0,6.5448876519678,0,0.552567831062295,0,0,0,0.622079175323615,0.269605053441981,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,1.4793148277115,0.508507300585533,0,0,0,0,0.885741385813839,0.723578631752448,0,0.442317039724898,0.295547618953547,0.438770794307945,0.10893846351899,1.39423744278603,0.153900517007594,0,0.69169171316418,0.269272933229316,0.54323685961004,0,0.457987967009312,3.73124343213044,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0.989471500037586,0,0.995261931078505,0.619202951523374,1.83309043480088,0.593042257361244,1.11207545051853,2.29728288912002,1.41542379259422,0,0.702793337176017,0,0.586993856796269,2.18502341580683,0,1.20990716048664,0,0,0.450970258243478,0.103688191397247,4.6525771089503,4.30289542638149,6.27865836814451,7.16834578637753,0,0,0,0.685946781900644,2.61177619741208,0,0.171986032471617,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890164884194,0,0,0.137041924646751,0,0.189932387867636,0.391102765469606,1.04206466326994,0.426905989478705,0.39961921916426,0.72045208577053,0.229073192331831,0,0,0,0.235694034616795,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.599037001496973,0,0,0,0.360299883542404,0,0.787831823072237,0.659326867049332,0.741438982396034,0,0,0,1.49823746722733,0,0,0,0,0,0.850493793212345,2.68347750079413,0,0.104909176269996,0.105600336519406,0.35857467866569,0.959575986597226,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,0,0.366078794705889,0.3755727921195,0,0.554645257684261,1.30402446176905,0,0.37494122388632,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0.597019211547496,0.233713309847224,0.554805861502613,0,0,0,0,0.604923695052956,0.621748802331122,1.4785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| ||
|short_description=p5@FERMT1 | |||
}} | }} |
Latest revision as of 10:40, 17 September 2015
Short description: | p5@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FERMT1_5end |
Coexpression cluster: | C1483_Gingival_Keratinocyte_Mammary_Prostate_Tracheal_Small_embryonic |
Association with transcript: | -81bp_to_ENST00000536936_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | G3V1L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 6.80e-22 | 42 |
respiratory epithelial cell | 6.56e-21 | 13 |
endodermal cell | 8.01e-19 | 58 |
general ecto-epithelial cell | 1.83e-15 | 14 |
epithelial cell | 5.28e-15 | 253 |
epithelial cell of tracheobronchial tree | 2.28e-12 | 9 |
epithelial cell of lower respiratory tract | 2.28e-12 | 9 |
acinar cell | 2.55e-11 | 5 |
transitional epithelial cell | 1.12e-09 | 4 |
urothelial cell | 1.12e-09 | 4 |
protein secreting cell | 2.32e-09 | 6 |
gingival epithelial cell | 1.03e-08 | 3 |
bronchial epithelial cell | 3.11e-08 | 3 |
epithelial cell of Malassez | 3.50e-08 | 3 |
duct epithelial cell | 3.58e-08 | 3 |
branched duct epithelial cell | 3.58e-08 | 3 |
tracheal epithelial cell | 3.58e-08 | 3 |
tracheoblast | 3.58e-08 | 3 |
embryonic cell | 8.77e-08 | 250 |
epithelial cell of alimentary canal | 8.87e-08 | 20 |
ecto-epithelial cell | 1.61e-07 | 34 |
acinar cell of salivary gland | 3.04e-07 | 3 |
epidermal cell | 9.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.25e-11 | 5 |
pancreas | 1.20e-10 | 10 |
transitional epithelium | 1.30e-09 | 6 |
gingival epithelium | 1.03e-08 | 3 |
viscus | 1.24e-08 | 18 |
lower respiratory tract epithelium | 3.11e-08 | 3 |
epithelium of bronchus | 3.11e-08 | 3 |
surface structure | 6.44e-08 | 99 |
respiratory system | 1.49e-07 | 74 |
head | 2.41e-07 | 56 |
tracheobronchial tree | 6.34e-07 | 15 |
lower respiratory tract | 6.34e-07 | 15 |