FFCP PHASE1:Hg19::chr2:10538258..10538282,+: Difference between revisions
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m moved FFCP PHASE1 hg19::chr2:10538258..10538282,+ to FFCP PHASE1:Hg19::chr2:10538258..10538282,+: NSchange |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:10538258..10538282,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr2:10538258..10538282,+ | |||
|id=chr2:10538258..10538282,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4!CL:0000097;4.21e-21;5!CL:0000163;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.14e-26,4;CL:0002222,7.14e-26,4;CL:0002224,7.14e-26,4;CL:0000097,4.21e-21,5;CL:0002028,4.21e-21,5;CL:0000163,2.19e-12,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001154!1.88e-19!1;UBERON:0001153!1.88e-19!1;UBERON:0007190!4.69e-19!1;UBERON:0001882!5.62e-19!1;UBERON:0005403!5.62e-19!1;UBERON:0000200!6.90e-13!6;UBERON:0000160!1.06e-10!27;UBERON:0001155!4.61e-09!9;UBERON:0005409!2.17e-08!35;UBERON:0000059!1.42e-07!11;UBERON:0001045!1.46e-07!11;UBERON:0002771!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.14e-26,4;UBERON:0005389,7.14e-26,4;UBERON:0000484,7.14e-26,4;UBERON:0002546,7.14e-26,4;UBERON:0000965,7.14e-26,4;UBERON:0001803,7.14e-26,4;UBERON:0003073,7.14e-26,4;UBERON:0005426,7.14e-26,4;UBERON:0000076,1.07e-13,8;UBERON:0007625,2.37e-10,11;UBERON:0001801,2.00e-08,14 | |||
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|short_description=p@chr2:10538258..10538282,+ | |||
}} | }} | ||
Latest revision as of 22:55, 28 July 2015
| Short description: | p@chr2:10538258..10538282, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr2:10538258..10538282, + |
| Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| crystallin accumulating cell | 7.14e-26 | 4 |
| vertebrate lens cell | 7.14e-26 | 4 |
| lens epithelial cell | 7.14e-26 | 4 |
| mast cell | 4.21e-21 | 5 |
| basophil mast progenitor cell | 4.21e-21 | 5 |
| endocrine cell | 2.19e-12 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| cuboidal epithelium | 7.14e-26 | 4 |
| transparent eye structure | 7.14e-26 | 4 |
| simple cuboidal epithelium | 7.14e-26 | 4 |
| cranial placode | 7.14e-26 | 4 |
| lens of camera-type eye | 7.14e-26 | 4 |
| epithelium of lens | 7.14e-26 | 4 |
| lens placode | 7.14e-26 | 4 |
| lens vesicle | 7.14e-26 | 4 |
| external ectoderm | 1.07e-13 | 8 |
| pigment epithelium of eye | 2.37e-10 | 11 |
| anterior segment of eyeball | 2.00e-08 | 14 |