FFCP PHASE1:Hg19::chr2:133012724..133012755,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:133012724..133012755,+ to FFCP PHASE1:Hg19::chr2:133012724..133012755,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:133012724..133012755,+ | |||
|coexpression_cluster_id=C3563 | |||
|description=CAGE_peak_at_chr2:133012724..133012755,+ | |||
|id=chr2:133012724..133012755,+ | |||
|ontology_enrichment_celltype=CL:0000393!5.58e-09!60;CL:0000211!5.58e-09!60;CL:0000680!6.67e-08!57;CL:0000056!6.67e-08!57;CL:0000355!6.67e-08!57;CL:0000187!1.75e-07!54;CL:0000183!5.19e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.45e-09,61;CL:0000211,2.45e-09,61;CL:0000680,1.64e-08,58;CL:0000056,1.64e-08,58;CL:0000355,1.64e-08,58;CL:0000187,6.41e-08,55;CL:0000192,5.93e-07,43;CL:0000514,5.93e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.67e-11,78;UBERON:0007524,2.87e-09,73;UBERON:0002329,3.59e-09,71;UBERON:0003059,3.59e-09,71;UBERON:0007282,3.59e-09,71;UBERON:0004290,3.59e-09,71;UBERON:0009618,3.59e-09,71;UBERON:0000926,5.78e-09,315;UBERON:0004120,5.78e-09,315;UBERON:0006603,5.78e-09,315;UBERON:0003077,7.54e-09,72;UBERON:0007285,7.54e-09,72;UBERON:0000486,1.18e-08,83;UBERON:0001134,1.84e-08,62;UBERON:0002036,1.84e-08,62;UBERON:0003082,1.84e-08,62;UBERON:0002385,2.76e-08,64;UBERON:0001015,2.76e-08,64;UBERON:0000383,2.76e-08,64;UBERON:0002204,5.11e-08,167;UBERON:0005256,3.95e-07,122;UBERON:0003081,5.08e-07,203 | |||
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| ||
|short_description=p@chr2:133012724..133012755,+ | |||
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Latest revision as of 00:22, 29 July 2015
Short description: | p@chr2:133012724..133012755, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:133012724..133012755, + |
Coexpression cluster: | C3563_mixed_Mesenchymal_Smooth_Hair_Cardiac_Neutrophils_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.45e-09 | 61 |
electrically active cell | 2.45e-09 | 61 |
muscle precursor cell | 1.64e-08 | 58 |
myoblast | 1.64e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.64e-08 | 58 |
muscle cell | 6.41e-08 | 55 |
smooth muscle cell | 5.93e-07 | 43 |
smooth muscle myoblast | 5.93e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.67e-11 | 78 |
dense mesenchyme tissue | 2.87e-09 | 73 |
somite | 3.59e-09 | 71 |
presomitic mesoderm | 3.59e-09 | 71 |
presumptive segmental plate | 3.59e-09 | 71 |
dermomyotome | 3.59e-09 | 71 |
trunk paraxial mesoderm | 3.59e-09 | 71 |
mesoderm | 5.78e-09 | 315 |
mesoderm-derived structure | 5.78e-09 | 315 |
presumptive mesoderm | 5.78e-09 | 315 |
paraxial mesoderm | 7.54e-09 | 72 |
presumptive paraxial mesoderm | 7.54e-09 | 72 |
multilaminar epithelium | 1.18e-08 | 83 |
skeletal muscle tissue | 1.84e-08 | 62 |
striated muscle tissue | 1.84e-08 | 62 |
myotome | 1.84e-08 | 62 |
muscle tissue | 2.76e-08 | 64 |
musculature | 2.76e-08 | 64 |
musculature of body | 2.76e-08 | 64 |
musculoskeletal system | 5.11e-08 | 167 |
trunk mesenchyme | 3.95e-07 | 122 |
lateral plate mesoderm | 5.08e-07 | 203 |