FFCP PHASE1:Hg19::chr2:202562732..202562746,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202562732..202562746,- to FFCP PHASE1:Hg19::chr2:202562732..202562746,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt=E7ET46 | |UniProt=E7ET46 | ||
|association_with_transcript=-13bp_to_ENST00000428900_5end | |||
|cluster_id=chr2:202562732..202562746,- | |||
|description=CAGE_peak_5_at_MPP4_5end | |||
|id=chr2:202562732..202562746,- | |||
|ontology_enrichment_celltype=CL:0000055!3.33e-22!180;CL:0000222!1.57e-15!119;CL:0002139!9.31e-15!24;CL:0000071!9.77e-15!18;CL:0002546!9.77e-15!18;CL:0000680!2.56e-12!57;CL:0000056!2.56e-12!57;CL:0000355!2.56e-12!57;CL:1000413!7.89e-12!9;CL:0002371!1.55e-11!591;CL:0000115!7.19e-11!35;CL:0002620!4.20e-10!23;CL:0000187!4.66e-10!54;CL:0000144!5.75e-10!625;CL:0000183!1.38e-09!59;CL:0000057!1.39e-09!75;CL:0000220!7.01e-09!246;CL:0002544!9.29e-09!6;CL:0002321!1.13e-08!248;CL:0002078!2.23e-08!44;CL:0000393!2.42e-08!60;CL:0000211!2.42e-08!60;CL:0000548!3.85e-08!679;CL:0000004!3.85e-08!679;CL:0000255!3.85e-08!679;CL:0000359!4.29e-08!32;CL:0000012!6.08e-08!682;CL:0002551!6.13e-08!6;CL:0000192!1.56e-07!42;CL:0000514!1.56e-07!42;CL:0002539!3.46e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002539;3.93e-17;10!CL:0000708;1.82e-15;3!CL:0000228;9.60e-12;1!CL:0002372;9.60e-12;1!CL:0000359;1.42e-11;32!CL:0000056;2.36e-11;4!CL:0000680;7.41e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,4.86e-17,10;CL:0000708,1.82e-15,3;CL:0000228,8.64e-12,1;CL:0002372,8.64e-12,1;CL:0000359,1.69e-11,32;CL:0000515,2.02e-11,4;CL:0000680,1.08e-10,58;CL:0000056,1.08e-10,58;CL:0000355,1.08e-10,58;CL:0000187,1.01e-08,55;CL:0000192,1.88e-08,43;CL:0000514,1.88e-08,43;CL:0000393,8.50e-08,61;CL:0000211,8.50e-08,61;CL:0002589,9.96e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000515;2.36e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.52e-19!79;UBERON:0007798!1.52e-19!79;UBERON:0000914!4.01e-17!83;UBERON:0002329!4.01e-17!83;UBERON:0003077!4.01e-17!83;UBERON:0003059!4.01e-17!83;UBERON:0007282!4.01e-17!83;UBERON:0009618!4.01e-17!83;UBERON:0007285!4.01e-17!83;UBERON:0001981!1.13e-15!60;UBERON:0007500!1.13e-15!60;UBERON:0004537!1.13e-15!60;UBERON:0006965!1.13e-15!60;UBERON:0000055!1.79e-15!69;UBERON:0004290!1.93e-15!70;UBERON:0000487!9.53e-15!22;UBERON:0001986!9.77e-15!18;UBERON:0004638!9.77e-15!18;UBERON:0004852!9.77e-15!18;UBERON:0000490!2.34e-14!138;UBERON:0000486!2.81e-14!82;UBERON:0006914!7.17e-14!25;UBERON:0004535!2.35e-13!110;UBERON:0001009!1.18e-12!113;UBERON:0004872!2.45e-12!84;UBERON:0003915!7.89e-12!9;UBERON:0004700!7.89e-12!9;UBERON:0001917!7.89e-12!9;UBERON:0000947!3.87e-11!21;UBERON:0010191!3.87e-11!21;UBERON:0001637!3.97e-11!42;UBERON:0003509!3.97e-11!42;UBERON:0004572!3.97e-11!42;UBERON:0001134!5.86e-11!61;UBERON:0002036!5.86e-11!61;UBERON:0003082!5.86e-11!61;UBERON:0002385!2.38e-10!63;UBERON:0001015!2.38e-10!63;UBERON:0000383!2.38e-10!63;UBERON:0005256!2.49e-08!143;UBERON:0004573!7.61e-08!33;UBERON:0004571!7.61e-08!33;UBERON:0003914!1.27e-07!118;UBERON:0004237!3.46e-07!10;UBERON:0004695!3.46e-07!10;UBERON:0002111!3.46e-07!10;UBERON:0004178!3.46e-07!10;UBERON:0002067!5.45e-07!9;UBERON:0004016!5.45e-07!9;UBERON:0010083!5.45e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;3.93e-17;10!UBERON:0004695;3.93e-17;10!UBERON:0002111;3.93e-17;10!UBERON:0004178;3.93e-17;10!UBERON:0003210;1.82e-15;3!UBERON:0007195;9.60e-12;1!UBERON:0002385;1.66e-11;31!UBERON:0001015;1.66e-11;31!UBERON:0000383;1.66e-11;31!UBERON:0001135;1.67e-11;15!UBERON:0000947;2.85e-08;21!UBERON:0010191;2.85e-08;21!UBERON:0004573;3.07e-08;33!UBERON:0004571;3.07e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,4.86e-17,10;UBERON:0004695,4.86e-17,10;UBERON:0002111,4.86e-17,10;UBERON:0004178,4.86e-17,10;UBERON:0003210,1.82e-15,3;UBERON:0007195,1.63e-11,1;UBERON:0001135,1.91e-11,15;UBERON:0002329,7.39e-11,71;UBERON:0003059,7.39e-11,71;UBERON:0007282,7.39e-11,71;UBERON:0004290,7.39e-11,71;UBERON:0009618,7.39e-11,71;UBERON:0003077,1.09e-10,72;UBERON:0007285,1.09e-10,72;UBERON:0007524,1.58e-10,73;UBERON:0001134,6.06e-10,62;UBERON:0002036,6.06e-10,62;UBERON:0003082,6.06e-10,62;UBERON:0007503,8.87e-10,78;UBERON:0002385,1.33e-09,64;UBERON:0001015,1.33e-09,64;UBERON:0000383,1.33e-09,64;UBERON:0000486,4.06e-09,83;UBERON:0000490,1.94e-08,148;UBERON:0000947,3.14e-08,21;UBERON:0010191,3.14e-08,21;UBERON:0004573,6.56e-08,33;UBERON:0004571,6.56e-08,33;UBERON:0001529,9.96e-07,2;UBERON:0007204,9.96e-07,2 | |||
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| ||
|short_description=p5@MPP4 | |||
}} | }} |
Latest revision as of 13:48, 19 September 2015
Short description: | p5@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MPP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENST00000428900_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | E7ET46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 4.86e-17 | 10 |
leptomeningeal cell | 1.82e-15 | 3 |
multinucleate cell | 8.64e-12 | 1 |
myotube | 8.64e-12 | 1 |
vascular associated smooth muscle cell | 1.69e-11 | 32 |
skeletal muscle myoblast | 2.02e-11 | 4 |
muscle precursor cell | 1.08e-10 | 58 |
myoblast | 1.08e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.08e-10 | 58 |
muscle cell | 1.01e-08 | 55 |
smooth muscle cell | 1.88e-08 | 43 |
smooth muscle myoblast | 1.88e-08 | 43 |
electrically responsive cell | 8.50e-08 | 61 |
electrically active cell | 8.50e-08 | 61 |
smooth muscle cell of the brachiocephalic vasculature | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood vessel smooth muscle | 4.86e-17 | 10 |
arterial system smooth muscle | 4.86e-17 | 10 |
artery smooth muscle tissue | 4.86e-17 | 10 |
aorta smooth muscle tissue | 4.86e-17 | 10 |
blood-cerebrospinal fluid barrier | 1.82e-15 | 3 |
stroma of bone marrow | 1.63e-11 | 1 |
smooth muscle tissue | 1.91e-11 | 15 |
somite | 7.39e-11 | 71 |
presomitic mesoderm | 7.39e-11 | 71 |
presumptive segmental plate | 7.39e-11 | 71 |
dermomyotome | 7.39e-11 | 71 |
trunk paraxial mesoderm | 7.39e-11 | 71 |
paraxial mesoderm | 1.09e-10 | 72 |
presumptive paraxial mesoderm | 1.09e-10 | 72 |
dense mesenchyme tissue | 1.58e-10 | 73 |
skeletal muscle tissue | 6.06e-10 | 62 |
striated muscle tissue | 6.06e-10 | 62 |
myotome | 6.06e-10 | 62 |
epithelial vesicle | 8.87e-10 | 78 |
muscle tissue | 1.33e-09 | 64 |
musculature | 1.33e-09 | 64 |
musculature of body | 1.33e-09 | 64 |
multilaminar epithelium | 4.06e-09 | 83 |
unilaminar epithelium | 1.94e-08 | 148 |
aorta | 3.14e-08 | 21 |
aortic system | 3.14e-08 | 21 |
systemic artery | 6.56e-08 | 33 |
systemic arterial system | 6.56e-08 | 33 |
brachiocephalic artery | 9.96e-07 | 2 |
brachiocephalic vasculature | 9.96e-07 | 2 |