FFCP PHASE1:Hg19::chr3:46395625..46395638,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr3:46395625..46395638,+ to FFCP PHASE1:Hg19::chr3:46395625..46395638,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=729230 | |EntrezGene=729230 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1603 | |HGNC=1603 | ||
|TSSclassifier=strong | |||
|UniProt=E9PH76 | |UniProt=E9PH76 | ||
|association_with_transcript=8bp_to_ENST00000421659_5end | |||
|cluster_id=chr3:46395625..46395638,+ | |||
|description=CAGE_peak_4_at_CCR2_5end | |||
|id=chr3:46395625..46395638,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.95e-34!172;CL:0000566!1.95e-34!172;CL:0000988!2.95e-31!182;CL:0002032!1.99e-30!165;CL:0000837!1.99e-30!165;CL:0002057!1.12e-29!42;CL:0002087!2.47e-28!119;CL:0000738!2.56e-27!140;CL:0000860!5.53e-27!45;CL:0002031!2.58e-26!124;CL:0000763!6.45e-26!112;CL:0000049!6.45e-26!112;CL:0002194!5.20e-25!63;CL:0000576!5.20e-25!63;CL:0000040!5.20e-25!63;CL:0000559!5.20e-25!63;CL:0000839!5.01e-24!70;CL:0002009!7.06e-24!65;CL:0000766!1.01e-22!76;CL:0000557!7.15e-21!71;CL:0002393!1.49e-07!9;CL:0002397!1.49e-07!9;CL:0000134!6.36e-07!358;CL:0000791!7.69e-07!18;CL:0000789!7.69e-07!18;CL:0002420!7.69e-07!18;CL:0002419!7.69e-07!18;CL:0000790!7.69e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.42e-14;3!CL:0000576;2.33e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.30e-14,3;CL:0002194,1.58e-12,59;CL:0000576,1.58e-12,59;CL:0000040,1.58e-12,59;CL:0000559,1.58e-12,59;CL:0002009,5.14e-12,61;CL:0000839,7.18e-11,66;CL:0000763,9.41e-11,108;CL:0000049,9.41e-11,108;CL:0000037,9.73e-11,168;CL:0000557,1.16e-10,67;CL:0000988,6.73e-10,177;CL:0000860,7.78e-10,42;CL:0002057,7.78e-10,42;CL:0000766,1.05e-09,72;CL:0000738,1.09e-08,136;CL:0002087,1.21e-08,115;CL:0000473,2.43e-08,48;CL:0000234,2.43e-08,48;CL:0002032,2.67e-08,161;CL:0000837,2.67e-08,161;CL:0002031,3.84e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!9.42e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.41e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.48e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.58e-31!102;UBERON:0003061!3.58e-31!102;UBERON:0002193!2.05e-29!112;UBERON:0002371!2.24e-18!80;UBERON:0001474!2.74e-16!86;UBERON:0002405!9.08e-16!115;UBERON:0004765!3.20e-12!101;UBERON:0001434!3.20e-12!101;UBERON:0000178!4.64e-12!15;UBERON:0000179!4.64e-12!15;UBERON:0000463!4.64e-12!15;UBERON:0003081!1.35e-08!216;UBERON:0007023!9.46e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.49e-26;15!UBERON:0000179;1.49e-26;15!UBERON:0000463;1.49e-26;15!UBERON:0002390;1.17e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.34e-26,15;UBERON:0000179,1.34e-26,15;UBERON:0000463,1.34e-26,15;UBERON:0002390,7.52e-21,98;UBERON:0003061,7.52e-21,98;UBERON:0002193,2.19e-18,108;UBERON:0002371,4.92e-09,76;UBERON:0001474,3.77e-08,82;UBERON:0003081,3.65e-07,203;UBERON:0004765,3.70e-07,90;UBERON:0002405,7.86e-07,93 | |||
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| ||
|short_description=p4@CCR2 | |||
}} | }} |
Latest revision as of 10:40, 18 September 2015
Short description: | p4@CCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCR2_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000421659_5end |
EntrezGene: | CCR2 |
HGNC: | 1603 |
UniProt: | E9PH76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.30e-14 | 3 |
monopoietic cell | 1.58e-12 | 59 |
monocyte | 1.58e-12 | 59 |
monoblast | 1.58e-12 | 59 |
promonocyte | 1.58e-12 | 59 |
macrophage dendritic cell progenitor | 5.14e-12 | 61 |
myeloid lineage restricted progenitor cell | 7.18e-11 | 66 |
myeloid cell | 9.41e-11 | 108 |
common myeloid progenitor | 9.41e-11 | 108 |
hematopoietic stem cell | 9.73e-11 | 168 |
granulocyte monocyte progenitor cell | 1.16e-10 | 67 |
hematopoietic cell | 6.73e-10 | 177 |
classical monocyte | 7.78e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.78e-10 | 42 |
myeloid leukocyte | 1.05e-09 | 72 |
leukocyte | 1.09e-08 | 136 |
nongranular leukocyte | 1.21e-08 | 115 |
defensive cell | 2.43e-08 | 48 |
phagocyte | 2.43e-08 | 48 |
hematopoietic oligopotent progenitor cell | 2.67e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.67e-08 | 161 |
hematopoietic lineage restricted progenitor cell | 3.84e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.34e-26 | 15 |
haemolymphatic fluid | 1.34e-26 | 15 |
organism substance | 1.34e-26 | 15 |
hematopoietic system | 7.52e-21 | 98 |
blood island | 7.52e-21 | 98 |
hemolymphoid system | 2.19e-18 | 108 |
bone marrow | 4.92e-09 | 76 |
bone element | 3.77e-08 | 82 |
lateral plate mesoderm | 3.65e-07 | 203 |
skeletal element | 3.70e-07 | 90 |
immune system | 7.86e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.48e-07 | 31 |