FFCP PHASE1:Hg19::chr3:50329783..50329824,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:50329783..50329824,- to FFCP PHASE1:Hg19::chr3:50329783..50329824,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7866 | |EntrezGene=7866 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5457 | |HGNC=5457 | ||
|TSSclassifier=strong | |||
|UniProt=F8WEI6 | |UniProt=F8WEI6 | ||
|association_with_transcript=0bp_to_ENST00000414734_5end | |||
|cluster_id=chr3:50329783..50329824,- | |||
|description=CAGE_peak_2_at_IFRD2_5end | |||
|id=chr3:50329783..50329824,- | |||
|ontology_enrichment_celltype=CL:0002321!6.36e-29!248;CL:0000220!2.07e-28!246;CL:0000548!4.19e-21!679;CL:0000004!4.19e-21!679;CL:0000255!4.19e-21!679;CL:0000012!2.04e-20!682;CL:0000066!3.59e-20!254;CL:0000055!1.31e-17!180;CL:0000222!1.71e-16!119;CL:0000144!4.27e-15!625;CL:0002371!3.27e-12!591;CL:0000003!1.47e-09!722;CL:0000076!4.70e-09!62;CL:0000680!9.92e-09!57;CL:0000056!9.92e-09!57;CL:0000355!9.92e-09!57;CL:0000183!1.14e-08!59;CL:0000213!2.68e-08!57;CL:0000215!2.68e-08!57;CL:0000393!3.57e-08!60;CL:0000211!3.57e-08!60;CL:0000187!4.16e-08!54;CL:0000359!1.21e-07!32;CL:0000192!1.47e-07!42;CL:0000514!1.47e-07!42;CL:0000063!4.73e-07!578;CL:0000071!6.46e-07!18;CL:0002546!6.46e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.44e-07;32!CL:0000071;7.08e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.82e-29,250;CL:0000066,8.84e-21,253;CL:0000222,8.85e-17,121;CL:0000076,4.46e-09,63;CL:0000213,8.58e-09,58;CL:0000215,8.58e-09,58;CL:0000680,2.10e-08,58;CL:0000056,2.10e-08,58;CL:0000355,2.10e-08,58;CL:0000393,7.12e-08,61;CL:0000211,7.12e-08,61;CL:0000187,8.73e-08,55;CL:0000359,1.10e-07,32;CL:0000192,3.41e-07,43;CL:0000514,3.41e-07,43;CL:0000071,5.93e-07,18;CL:0002546,5.93e-07,18;CL:0002078,6.31e-07,45;CL:0000115,9.08e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;7.08e-07;18 | |||
|ontology_enrichment_disease=DOID:14566!7.43e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.43e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.83e-16!118;UBERON:0000490!6.78e-15!138;UBERON:0003104!1.21e-13!238;UBERON:0009142!1.21e-13!238;UBERON:0002049!1.47e-13!79;UBERON:0007798!1.47e-13!79;UBERON:0001981!2.12e-13!60;UBERON:0007500!2.12e-13!60;UBERON:0004537!2.12e-13!60;UBERON:0006965!2.12e-13!60;UBERON:0000055!2.45e-13!69;UBERON:0004872!2.49e-13!84;UBERON:0000486!6.07e-13!82;UBERON:0001637!1.65e-12!42;UBERON:0003509!1.65e-12!42;UBERON:0004572!1.65e-12!42;UBERON:0005256!6.22e-12!143;UBERON:0004290!3.44e-11!70;UBERON:0000914!7.10e-10!83;UBERON:0002329!7.10e-10!83;UBERON:0003077!7.10e-10!83;UBERON:0003059!7.10e-10!83;UBERON:0007282!7.10e-10!83;UBERON:0009618!7.10e-10!83;UBERON:0007285!7.10e-10!83;UBERON:0002100!1.00e-09!216;UBERON:0001009!1.07e-09!113;UBERON:0001134!1.49e-09!61;UBERON:0002036!1.49e-09!61;UBERON:0003082!1.49e-09!61;UBERON:0004535!1.98e-09!110;UBERON:0004573!4.58e-09!33;UBERON:0004571!4.58e-09!33;UBERON:0002385!7.95e-09!63;UBERON:0001015!7.95e-09!63;UBERON:0000383!7.95e-09!63;UBERON:0000119!8.16e-09!312;UBERON:0000483!2.04e-08!309;UBERON:0000487!1.69e-07!22;UBERON:0006914!2.00e-07!25;UBERON:0001986!6.46e-07!18;UBERON:0004638!6.46e-07!18;UBERON:0004852!6.46e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.90e-09;42!UBERON:0003509;1.90e-09;42!UBERON:0004572;1.90e-09;42!UBERON:0004573;3.80e-08;33!UBERON:0004571;3.80e-08;33!UBERON:0007500;5.38e-08;56!UBERON:0001981;5.38e-08;56!UBERON:0004537;5.38e-08;56!UBERON:0000490;8.95e-08;33!UBERON:0003914;9.89e-08;74!UBERON:0000487;2.30e-07;22!UBERON:0006914;3.11e-07;25!UBERON:0004638;7.08e-07;18!UBERON:0001986;7.08e-07;18!UBERON:0004852;7.08e-07;18!UBERON:0001737;9.56e-07;9!UBERON:0001557;9.56e-07;9 | |||
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| ||
|short_description=p2@IFRD2 | |||
}} | }} |
Latest revision as of 19:30, 18 September 2015
Short description: | p2@IFRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFRD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000414734_5end |
EntrezGene: | IFRD2 |
HGNC: | 5457 |
UniProt: | F8WEI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.82e-29 | 250 |
epithelial cell | 8.84e-21 | 253 |
mesodermal cell | 8.85e-17 | 121 |
squamous epithelial cell | 4.46e-09 | 63 |
lining cell | 8.58e-09 | 58 |
barrier cell | 8.58e-09 | 58 |
muscle precursor cell | 2.10e-08 | 58 |
myoblast | 2.10e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.10e-08 | 58 |
electrically responsive cell | 7.12e-08 | 61 |
electrically active cell | 7.12e-08 | 61 |
muscle cell | 8.73e-08 | 55 |
vascular associated smooth muscle cell | 1.10e-07 | 32 |
smooth muscle cell | 3.41e-07 | 43 |
smooth muscle myoblast | 3.41e-07 | 43 |
blood vessel endothelial cell | 5.93e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.93e-07 | 18 |
meso-epithelial cell | 6.31e-07 | 45 |
endothelial cell | 9.08e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.43e-07 | 239 |