FFCP PHASE1:Hg19::chr4:134084179..134084217,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:134084179..134084217,+ to FFCP PHASE1:Hg19::chr4:134084179..134084217,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:134084179..134084217,+ | |||
|description=CAGE_peak_at_chr4:134084179..134084217,+ | |||
|id=chr4:134084179..134084217,+ | |||
|ontology_enrichment_celltype=CL:0002150!5.94e-09!3;CL:0000861!5.94e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002127;6.73e-11;1!CL:0000911;6.73e-11;1!CL:0000814;6.73e-11;1!CL:0000319;2.08e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,6.73e-11,1;CL:0000914,6.73e-11,1;CL:0000911,6.73e-11,1;CL:0000814,6.73e-11,1;CL:0002042,6.73e-11,1;CL:0002039,6.73e-11,1;CL:0002040,6.73e-11,1;CL:0002041,6.73e-11,1;CL:0000319,2.50e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.77e-24;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;1.03e-10;1!DOID:3030;2.08e-10;1!DOID:2355;4.14e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.44e-14,143;DOID:305,2.25e-12,106;DOID:162,5.54e-11,235;DOID:6193,8.95e-11,1;DOID:14566,1.09e-10,239;DOID:3030,2.50e-10,1;DOID:2355,4.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.32e-33!57;UBERON:0005068!1.32e-33!57;UBERON:0006241!1.32e-33!57;UBERON:0007135!1.32e-33!57;UBERON:0002616!6.46e-30!59;UBERON:0002780!1.48e-29!41;UBERON:0001890!1.48e-29!41;UBERON:0006240!1.48e-29!41;UBERON:0000955!1.63e-29!69;UBERON:0006238!1.63e-29!69;UBERON:0003080!1.07e-28!42;UBERON:0001017!1.38e-28!82;UBERON:0005743!2.05e-28!86;UBERON:0001950!2.50e-27!20;UBERON:0000073!2.89e-26!94;UBERON:0001016!2.89e-26!94;UBERON:0001893!2.57e-25!34;UBERON:0002619!1.52e-24!22;UBERON:0002346!7.61e-24!90;UBERON:0002791!1.10e-23!33;UBERON:0002020!6.02e-23!34;UBERON:0003528!6.02e-23!34;UBERON:0001737!8.68e-23!9;UBERON:0003075!3.44e-22!86;UBERON:0007284!3.44e-22!86;UBERON:0001869!3.53e-22!32;UBERON:0000956!3.56e-21!25;UBERON:0000203!3.56e-21!25;UBERON:0003056!3.47e-19!61;UBERON:0007023!9.05e-18!115;UBERON:0000153!1.10e-15!129;UBERON:0007811!1.10e-15!129;UBERON:0000033!1.13e-15!123;UBERON:0000924!7.01e-14!173;UBERON:0006601!7.01e-14!173;UBERON:0000200!2.70e-13!6;UBERON:0004121!1.11e-12!169;UBERON:0001557!4.29e-12!19;UBERON:0001872!2.39e-11!5;UBERON:0002298!6.64e-10!8;UBERON:0000477!1.04e-09!286;UBERON:0002021!1.30e-07!5;UBERON:0002771!1.51e-07!3;UBERON:0001896!1.62e-07!3;UBERON:0005290!1.62e-07!3;UBERON:0010096!1.62e-07!3;UBERON:0000064!4.36e-07!219;UBERON:0001871!7.47e-07!7;UBERON:0000025!7.92e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.20e-79;9!UBERON:0001557;1.20e-79;9!UBERON:0000072;2.20e-17;37!UBERON:0000065;1.10e-14;44!UBERON:0001004;8.55e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.95e-80,9;UBERON:0001557,3.06e-46,19;UBERON:0008947,4.77e-18,38;UBERON:0003258,4.77e-18,38;UBERON:0000072,7.47e-18,47;UBERON:0000065,2.39e-15,54;UBERON:0001004,8.52e-11,74;UBERON:0001041,5.87e-09,87 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,3.54920400119532,4.55178663210875,3.37415441836875,3.97058301836618,3.92182999366331,3.32178866755535,2.56179485504312,3.33576490713088,3.07797725557112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,19.6149001988673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09789806269672,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.511343412510774,1.6001024709939,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1663821647212,0,0.783939179315021,0,0,4.64362287673365,4.83781656445426,4.09300175682639,4.59846559497972,0,0,0,0,0.19871461170299,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0,0.360299883542404,0,0,0,0,0,1.18542664892098,0,0,0.160753148465019,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.500763722825999,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,3.19504781379835,0,0,0,0,0,0.736423801007363,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0,0.504143392443436,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0.781078098613847,0.620060389503552,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0.606965604236632,0,0,0.460935950223117,0,0.475788130837822,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,4.53341558935688,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:134084179..134084217,+ | |||
}} | }} |
Latest revision as of 01:36, 30 July 2015
Short description: | p@chr4:134084179..134084217, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:134084179..134084217, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 6.73e-11 | 1 |
immature NK T cell | 6.73e-11 | 1 |
effector T cell | 6.73e-11 | 1 |
mature NK T cell | 6.73e-11 | 1 |
immature NK T cell stage IV | 6.73e-11 | 1 |
immature NK T cell stage I | 6.73e-11 | 1 |
immature NK T cell stage II | 6.73e-11 | 1 |
immature NK T cell stage III | 6.73e-11 | 1 |
mucus secreting cell | 2.50e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.95e-80 | 9 |
upper respiratory tract | 3.06e-46 | 19 |
respiratory primordium | 4.77e-18 | 38 |
endoderm of foregut | 4.77e-18 | 38 |
segment of respiratory tract | 7.47e-18 | 47 |
respiratory tract | 2.39e-15 | 54 |
respiratory system | 8.52e-11 | 74 |
foregut | 5.87e-09 | 87 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.44e-14 | 143 |
carcinoma | 2.25e-12 | 106 |
cancer | 5.54e-11 | 235 |
epithelioid sarcoma | 8.95e-11 | 1 |
disease of cellular proliferation | 1.09e-10 | 239 |
mucinous adenocarcinoma | 2.50e-10 | 1 |
anemia | 4.33e-10 | 1 |