FFCP PHASE1:Hg19::chr4:147866960..147866991,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83894 | |EntrezGene=83894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29936 | |HGNC=29936 | ||
|TSSclassifier=strong | |||
|UniProt=A8MUB8,E7EQZ6,G5E9Z5 | |UniProt=A8MUB8,E7EQZ6,G5E9Z5 | ||
|association_with_transcript=0bp_to_ENST00000398883,ENST00000508306,ENST00000513335_5end | |||
|cluster_id=chr4:147866960..147866991,- | |||
|description=CAGE_peak_2_at_TTC29_5end | |||
|id=chr4:147866960..147866991,- | |||
|ontology_enrichment_celltype=CL:0002274!2.66e-09!5;CL:0000457!2.66e-09!5;CL:0002191!2.66e-09!5;CL:0000097!2.66e-09!5;CL:0000831!2.66e-09!5;CL:0002028!2.66e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.21e-11;5!CL:0000228;4.46e-07;1!CL:0002372;4.46e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.52e-11,5;CL:0002028,7.52e-11,5;CL:0000228,3.62e-07,1;CL:0002372,3.62e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.51e-13;2!UBERON:0008947;5.20e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.46e-07;1!DOID:3165;4.46e-07;1!DOID:0060121;4.46e-07;1!DOID:2438;4.46e-07;1!DOID:4418;4.46e-07;1!DOID:8552;4.46e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8552,3.02e-07,1;DOID:0060085,3.41e-07,1;DOID:3165,3.41e-07,1;DOID:0060121,3.41e-07,1;DOID:2438,3.41e-07,1;DOID:4418,3.41e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.05e-16!57;UBERON:0005068!2.05e-16!57;UBERON:0006241!2.05e-16!57;UBERON:0007135!2.05e-16!57;UBERON:0002616!2.95e-14!59;UBERON:0007023!4.44e-13!115;UBERON:0002780!7.53e-12!41;UBERON:0001890!7.53e-12!41;UBERON:0006240!7.53e-12!41;UBERON:0000955!8.52e-12!69;UBERON:0006238!8.52e-12!69;UBERON:0003080!1.94e-11!42;UBERON:0001017!2.55e-11!82;UBERON:0000073!4.90e-11!94;UBERON:0001016!4.90e-11!94;UBERON:0005743!2.04e-10!86;UBERON:0003075!5.39e-09!86;UBERON:0007284!5.39e-09!86;UBERON:0001894!1.89e-08!7;UBERON:0006222!1.89e-08!7;UBERON:0002346!2.90e-08!90;UBERON:0002298!7.91e-08!8;UBERON:0000025!1.23e-07!194;UBERON:0000369!2.14e-07!4;UBERON:0002435!2.14e-07!4;UBERON:0000204!2.14e-07!4;UBERON:0010082!2.14e-07!4;UBERON:0002020!3.63e-07!34;UBERON:0003528!3.63e-07!34;UBERON:0003056!5.20e-07!61;UBERON:0001893!5.86e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.15e-13;2!UBERON:0001873;8.51e-13;2!UBERON:0002298;1.94e-09;6!UBERON:0001896;5.96e-09;3!UBERON:0005290;5.96e-09;3!UBERON:0005383;8.02e-09;3!UBERON:0005382;8.02e-09;3!UBERON:0001301;1.44e-07;1!UBERON:0002171;2.16e-07;1!UBERON:0006518;2.16e-07;1!UBERON:0008949;2.16e-07;1!UBERON:0000101;2.16e-07;1!UBERON:0002167;2.16e-07;1!UBERON:0000369;8.09e-07;4!UBERON:0002435;8.09e-07;4!UBERON:0000204;8.09e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,2.71e-13,2;UBERON:0001873,5.28e-13,2;UBERON:0010122,5.28e-13,2;UBERON:0002298,1.54e-09,6;UBERON:0001896,4.25e-09,3;UBERON:0005290,4.25e-09,3;UBERON:0010096,4.25e-09,3;UBERON:0005383,5.85e-09,3;UBERON:0005382,5.85e-09,3;UBERON:0001301,1.44e-07,1;UBERON:0002171,1.85e-07,1;UBERON:0006518,1.85e-07,1;UBERON:0008949,1.85e-07,1;UBERON:0000101,1.85e-07,1;UBERON:0002167,1.85e-07,1;UBERON:0000369,6.40e-07,4;UBERON:0002435,6.40e-07,4;UBERON:0000204,6.40e-07,4;UBERON:0010082,6.40e-07,4 | |||
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| ||
|short_description=p2@TTC29 | |||
}} | }} |
Latest revision as of 23:54, 15 September 2015
Short description: | p2@TTC29 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TTC29_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398883, ENST00000508306, ENST00000513335_5end |
EntrezGene: | TTC29 |
HGNC: | 29936 |
UniProt: | A8MUB8E7EQZ6G5E9Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.52e-11 | 5 |
basophil mast progenitor cell | 7.52e-11 | 5 |
multinucleate cell | 3.62e-07 | 1 |
myotube | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 2.71e-13 | 2 |
caudate nucleus | 5.28e-13 | 2 |
future caudate nucleus | 5.28e-13 | 2 |
brainstem | 1.54e-09 | 6 |
medulla oblongata | 4.25e-09 | 3 |
myelencephalon | 4.25e-09 | 3 |
future myelencephalon | 4.25e-09 | 3 |
caudate-putamen | 5.85e-09 | 3 |
dorsal striatum | 5.85e-09 | 3 |
epididymis | 1.44e-07 | 1 |
lower lobe of right lung | 1.85e-07 | 1 |
right lung lobe | 1.85e-07 | 1 |
lower lobe of lung | 1.85e-07 | 1 |
lobe of lung | 1.85e-07 | 1 |
right lung | 1.85e-07 | 1 |
corpus striatum | 6.40e-07 | 4 |
striatum | 6.40e-07 | 4 |
ventral part of telencephalon | 6.40e-07 | 4 |
future corpus striatum | 6.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic myeloid leukemia | 3.02e-07 | 1 |
organ system benign neoplasm | 3.41e-07 | 1 |
skin benign neoplasm | 3.41e-07 | 1 |
integumentary system benign neoplasm | 3.41e-07 | 1 |
dermis tumor | 3.41e-07 | 1 |
cutaneous fibrous histiocytoma | 3.41e-07 | 1 |