FFCP PHASE1:Hg19::chr5:178686282..178686296,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:178686282..178686296,- to FFCP PHASE1:Hg19::chr5:178686282..178686296,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:178686282..178686296,- | |||
|description=CAGE_peak_at_chr5:178686282..178686296,- | |||
|id=chr5:178686282..178686296,- | |||
|ontology_enrichment_celltype=CL:0000055!4.72e-33!180;CL:0000057!2.15e-20!75;CL:0000680!4.73e-17!57;CL:0000056!4.73e-17!57;CL:0000355!4.73e-17!57;CL:0000048!4.84e-16!430;CL:0000723!1.86e-15!436;CL:0000187!2.00e-15!54;CL:0000359!5.24e-15!32;CL:0000034!1.05e-14!444;CL:0000192!3.12e-14!42;CL:0000514!3.12e-14!42;CL:0000183!1.91e-13!59;CL:0000393!4.31e-13!60;CL:0000211!4.31e-13!60;CL:0002334!4.34e-13!12;CL:0000144!3.05e-12!625;CL:0002371!3.92e-12!591;CL:0000222!1.11e-09!119;CL:0000548!1.63e-09!679;CL:0000004!1.63e-09!679;CL:0000255!1.63e-09!679;CL:0000012!2.45e-09!682;CL:0002620!3.20e-08!23;CL:0000003!4.11e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.51e-16;32!CL:0002334;2.17e-13;12!CL:0000192;1.26e-12;43!CL:0002580;2.32e-09;3!CL:0000135;1.42e-08;3!CL:0000388;1.42e-08;3!CL:0002620;5.62e-08;23!CL:0002595;1.33e-07;5!CL:0002539;2.78e-07;10!CL:0000187;4.92e-07;55!CL:0000393;6.46e-07;61!CL:0000211;6.46e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.22e-17,32;CL:0000680,8.35e-16,58;CL:0000056,8.35e-16,58;CL:0000355,8.35e-16,58;CL:0000048,8.85e-16,427;CL:0000057,2.13e-15,76;CL:0000723,2.48e-15,433;CL:0000192,3.30e-15,43;CL:0000514,3.30e-15,43;CL:0000034,9.41e-15,441;CL:0000187,1.28e-13,55;CL:0002334,2.22e-13,12;CL:0000393,8.85e-12,61;CL:0000211,8.85e-12,61;CL:0002580,2.42e-09,3;CL:0000135,1.12e-08,3;CL:0000388,1.12e-08,3;CL:0000222,1.83e-08,121;CL:0002620,6.11e-08,23;CL:0002595,9.32e-08,5;CL:0000136,2.57e-07,15;CL:0002539,2.81e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.26e-12;43!CL:0000355;3.46e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.50e-09;5!DOID:450;4.50e-09;5!DOID:66;4.50e-09;5!DOID:423;4.50e-09;5!DOID:0080000;4.50e-09;5!DOID:11722;4.50e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.05e-09,5;DOID:450,5.05e-09,5;DOID:66,5.05e-09,5;DOID:423,5.05e-09,5;DOID:0080000,5.05e-09,5;DOID:11722,5.05e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!1.55e-16!70;UBERON:0001134!2.31e-15!61;UBERON:0002036!2.31e-15!61;UBERON:0003082!2.31e-15!61;UBERON:0000486!5.33e-15!82;UBERON:0002385!1.33e-14!63;UBERON:0001015!1.33e-14!63;UBERON:0000383!1.33e-14!63;UBERON:0000914!2.06e-13!83;UBERON:0002329!2.06e-13!83;UBERON:0003077!2.06e-13!83;UBERON:0003059!2.06e-13!83;UBERON:0007282!2.06e-13!83;UBERON:0009618!2.06e-13!83;UBERON:0007285!2.06e-13!83;UBERON:0001637!6.21e-13!42;UBERON:0003509!6.21e-13!42;UBERON:0004572!6.21e-13!42;UBERON:0004573!1.39e-11!33;UBERON:0004571!1.39e-11!33;UBERON:0001981!3.98e-08!60;UBERON:0007500!3.98e-08!60;UBERON:0004537!3.98e-08!60;UBERON:0006965!3.98e-08!60;UBERON:0002199!1.16e-07!45;UBERON:0002416!1.16e-07!45;UBERON:0004872!2.19e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.94e-12;33!UBERON:0004571;1.94e-12;33!UBERON:0001637;9.87e-11;42!UBERON:0003509;9.87e-11;42!UBERON:0004572;9.87e-11;42!UBERON:0007846;1.42e-08;3!UBERON:0000043;1.42e-08;3!UBERON:0007845;1.42e-08;3!UBERON:0001013;5.26e-08;14!UBERON:0003834;1.33e-07;5!UBERON:0001533;1.33e-07;5!UBERON:0004237;2.78e-07;10!UBERON:0004695;2.78e-07;10!UBERON:0002111;2.78e-07;10!UBERON:0004178;2.78e-07;10!UBERON:0004457;7.64e-07;9!UBERON:0000042;7.64e-07;9!UBERON:0000310;8.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,9.05e-16,42;UBERON:0003509,9.05e-16,42;UBERON:0004572,9.05e-16,42;UBERON:0004573,7.79e-15,33;UBERON:0004571,7.79e-15,33;UBERON:0001134,2.06e-14,62;UBERON:0002036,2.06e-14,62;UBERON:0003082,2.06e-14,62;UBERON:0002385,8.78e-14,64;UBERON:0001015,8.78e-14,64;UBERON:0000383,8.78e-14,64;UBERON:0002329,7.22e-12,71;UBERON:0003059,7.22e-12,71;UBERON:0007282,7.22e-12,71;UBERON:0004290,7.22e-12,71;UBERON:0009618,7.22e-12,71;UBERON:0003077,1.26e-11,72;UBERON:0007285,1.26e-11,72;UBERON:0000486,1.26e-11,83;UBERON:0007524,2.16e-11,73;UBERON:0007503,2.61e-10,78;UBERON:0007500,6.59e-10,59;UBERON:0001981,6.59e-10,59;UBERON:0004537,6.59e-10,59;UBERON:0006965,6.59e-10,59;UBERON:0007846,1.12e-08,3;UBERON:0000043,1.12e-08,3;UBERON:0007845,1.12e-08,3;UBERON:0000055,5.01e-08,68;UBERON:0001013,5.62e-08,14;UBERON:0003834,9.32e-08,5;UBERON:0001533,9.32e-08,5;UBERON:0004872,1.23e-07,83;UBERON:0004237,2.81e-07,10;UBERON:0004695,2.81e-07,10;UBERON:0002111,2.81e-07,10;UBERON:0004178,2.81e-07,10;UBERON:0000310,8.97e-07,10 | |||
|phase1_expression=12.5358081696684,2.14100523890983,3.38290569830331,1.0007329835313,0,4.36169262050184,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44989579422746,3.54668382198357,0,10.6748995729705,4.44001587150888,0,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,5.38168907066586,3.20336083227851,0,12.6038260355449,6.08009922506789,8.75977836155139,5.02515512095292,0,0,0,0,2.26304479546337,9.58525899794859,6.14587799188606,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,3.87815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31583314765545,0,3.89894665610022,0,0,0,0,0,0,20.7037268534638,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,11.062597305424,11.5122762974772,11.9484243292567,0,4.5481500811197,0,7.3064815838898,0.184369168541703,0.868836144680828,0,0,0,0,0,0,0,0,12.9016060065764,7.21271274453894,8.41980283299221,3.71603532841533,0,0.160853921143607,4.45254199334973,6.32259744590888,0.177561725313127,8.70547853746377,2.59627214591811,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0,0,0,1.06337790121334,0,0,1.10269257987624,0,0.725083469571143,0.0852266274161009,0.890320356467374,0,0,0,0,18.1289764225941,42.4996668221364,13.940745403212,0,9.04920251538937,13.0489948811261,0,10.1618669586814,0,0.316379424718726,0,0,0,4.13664222303718,0.78494864019923,0.899362287916574,0,0,7.27856933663938,9.5106192703805,0,0,1.94970791705028,0,2.18399858252777,4.52497382251881,1.13008116620243,1.65409603063837,1.99031692572366,1.75380354101505,0,0,0,1.54911749049875,1.97186921772569,0,0,0,0,5.2776908824416,3.95153871551882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8364338181224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4328604663981,3.97312626740282,2.77402930751307,2.65164207385125,6.0376296420618,0,0,0,0,0.147855149989634,0,0,1.24210365501008,0,0,0.521745061811734,0.751288044986092,2.66563648518157,0,4.9099137984691,0.859284456339908,2.32016879939247,3.98095888698616,1.60011105865261,0.686791410365586,1.01024846629776,0,0,0.643324774124777,0,0,0,0,0.895444205407437,0,0.438568099157414,2.8270263351341,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,8.77178819574484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,5.54610754357702,6.92202499398063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=12.5358081696684,2.14100523890983,3.38290569830331,1.0007329835313,0,4.36169262050184,5.06599756336621,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44989579422746,3.54668382198357,0,10.6748995729705,4.44001587150888,0,0.269421344139376,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,5.38168907066586,3.20336083227851,0,12.6038260355449,6.08009922506789,8.75977836155139,5.02515512095292,0,0,0,0,2.26304479546337,9.58525899794859,6.14587799188606,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,3.87815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31583314765545,0,3.89894665610022,0,0,0,0,0,0,20.7037268534638,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,11.062597305424,11.5122762974772,11.9484243292567,0,4.5481500811197,0,7.3064815838898,0.184369168541703,0.868836144680828,0,0,0,0,0,0,0,0,12.9016060065764,7.21271274453894,8.41980283299221,3.71603532841533,0,0.160853921143607,4.45254199334973,6.32259744590888,0.177561725313127,8.70547853746377,2.59627214591811,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0,0.103041011647722,0,0,0,0,0,1.06337790121334,0,0,1.10269257987624,0,0.725083469571143,0.0852266274161009,0.890320356467374,0,0,0,0,18.1289764225941,42.4996668221364,13.940745403212,0,9.04920251538937,13.0489948811261,0,10.1618669586814,0,0.316379424718726,0,0,0,4.13664222303718,0.78494864019923,0.899362287916574,0,0,7.27856933663938,9.5106192703805,0,0,1.94970791705028,0,2.18399858252777,4.52497382251881,1.13008116620243,1.65409603063837,1.99031692572366,1.75380354101505,0,0,0,1.54911749049875,1.97186921772569,0,0,0,0,5.2776908824416,3.95153871551882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,34.8364338181224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4328604663981,3.97312626740282,2.77402930751307,2.65164207385125,6.0376296420618,0,0,0,0,0.147855149989634,0,0,1.24210365501008,0,0,0.521745061811734,0.751288044986092,2.66563648518157,0,4.9099137984691,0.859284456339908,2.32016879939247,3.98095888698616,1.60011105865261,0.686791410365586,1.01024846629776,0,0,0.643324774124777,0,0,0,0,0.895444205407437,0,0.438568099157414,2.8270263351341,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,8.77178819574484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,5.54610754357702,6.92202499398063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr5:178686282..178686296,- | |||
}} | }} |
Latest revision as of 13:45, 30 July 2015
Short description: | p@chr5:178686282..178686296, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:178686282..178686296, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.22e-17 | 32 |
muscle precursor cell | 8.35e-16 | 58 |
myoblast | 8.35e-16 | 58 |
multi-potent skeletal muscle stem cell | 8.35e-16 | 58 |
multi fate stem cell | 8.85e-16 | 427 |
fibroblast | 2.13e-15 | 76 |
somatic stem cell | 2.48e-15 | 433 |
smooth muscle cell | 3.30e-15 | 43 |
smooth muscle myoblast | 3.30e-15 | 43 |
stem cell | 9.41e-15 | 441 |
muscle cell | 1.28e-13 | 55 |
preadipocyte | 2.22e-13 | 12 |
electrically responsive cell | 8.85e-12 | 61 |
electrically active cell | 8.85e-12 | 61 |
preadipocyte of the breast | 2.42e-09 | 3 |
fibrocyte | 1.12e-08 | 3 |
tendon cell | 1.12e-08 | 3 |
mesodermal cell | 1.83e-08 | 121 |
skin fibroblast | 6.11e-08 | 23 |
smooth muscle cell of the subclavian artery | 9.32e-08 | 5 |
fat cell | 2.57e-07 | 15 |
aortic smooth muscle cell | 2.81e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.05e-09 | 5 |
myotonic disease | 5.05e-09 | 5 |
muscle tissue disease | 5.05e-09 | 5 |
myopathy | 5.05e-09 | 5 |
muscular disease | 5.05e-09 | 5 |
myotonic dystrophy | 5.05e-09 | 5 |