FFCP PHASE1:Hg19::chr7:116200671..116200735,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:116200671..116200735,+ to FFCP PHASE1:Hg19::chr7:116200671..116200735,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=857 | |EntrezGene=857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1527 | |HGNC=1527 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=195bp_to_AL133639_5end | |||
|cluster_id=chr7:116200671..116200735,+ | |||
|coexpression_cluster_id=C2875 | |||
|description=CAGE_peak_8_at_CAV1_5end | |||
|id=chr7:116200671..116200735,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.72e-12!119;CL:0000220!2.57e-11!246;CL:0000055!3.50e-11!180;CL:0002321!5.16e-11!248;CL:0000057!2.67e-08!75;CL:0002139!1.79e-07!24;CL:0000680!2.40e-07!57;CL:0000056!2.40e-07!57;CL:0000355!2.40e-07!57;CL:0000076!2.75e-07!62;CL:0000213!8.23e-07!57;CL:0000215!8.23e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.54e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.00e-09,121;CL:0002139,3.76e-08,24;CL:0000136,6.37e-08,15;CL:0000213,3.09e-07,58;CL:0000215,3.09e-07,58;CL:0002321,8.80e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.03e-11!83;UBERON:0002329!1.03e-11!83;UBERON:0003077!1.03e-11!83;UBERON:0003059!1.03e-11!83;UBERON:0007282!1.03e-11!83;UBERON:0009618!1.03e-11!83;UBERON:0007285!1.03e-11!83;UBERON:0000486!2.53e-11!82;UBERON:0004290!6.90e-10!70;UBERON:0003102!1.33e-09!95;UBERON:0000055!3.87e-09!69;UBERON:0002049!5.51e-09!79;UBERON:0007798!5.51e-09!79;UBERON:0002385!2.17e-08!63;UBERON:0001015!2.17e-08!63;UBERON:0000383!2.17e-08!63;UBERON:0001134!3.41e-08!61;UBERON:0002036!3.41e-08!61;UBERON:0003082!3.41e-08!61;UBERON:0000490!2.14e-07!138;UBERON:0000468!3.37e-07!659;UBERON:0002100!5.12e-07!216;UBERON:0001981!6.55e-07!60;UBERON:0007500!6.55e-07!60;UBERON:0004537!6.55e-07!60;UBERON:0006965!6.55e-07!60;UBERON:0004872!9.42e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;8.18e-07;31!UBERON:0001015;8.18e-07;31!UBERON:0000383;8.18e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.68e-09,99;UBERON:0000486,5.14e-08,83;UBERON:0007503,5.07e-07,78;UBERON:0002199,5.87e-07,46;UBERON:0002416,5.87e-07,46;UBERON:0007524,8.25e-07,73;UBERON:0004923,8.49e-07,66 | |||
|phase1_expression=3.81524596468169,2.99740733447376,1.83240725324762,2.00146596706261,3.12872766099101,6.10636966870258,0,1.89515962028049,2.61185628199839,0.245733936501509,1.39560233594486,0.873765488520689,1.05506791291381,0.495065411840187,1.32558950291166,2.01697543935533,4.21886169616784,3.65155045193687,3.41552959153355,0.984968464614303,0.612002073732759,0.313454721478088,0.286235987131057,1.09499540058307,0.251085279189606,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.511450247374121,1.80719576192283,1.00267582127178,1.59331170856906,0,0,1.79616152611729,1.33037638477538,1.14185221401064,0,0,1.11235332835329,0,0,0,0,0,0,0.39752481473341,1.72046919021225,2.08284300964557,2.26123176769604,1.67799774483962,1.10047216776027,0.208994966536811,5.16833518338658,4.98072767761394,1.67360306382335,2.41697590265488,3.80136052859256,3.41686880567437,2.94130464276695,0.81014194788176,2.14319347881791,3.59246996201872,3.0405099730497,1.53316637465883,0,2.01521918323448,0,0,0.872188104285069,4.47274756525787,1.2663051166458,0.132409180813219,1.43418310374407,1.77334191099179,1.12135520028461,0,0.24666754841716,0.311211035399766,0.538842688278752,0.817309515567294,0,2.30470369792,0,4.05808099879417,1.1409436430889,6.27684458317565,1.64408298101271,2.42809416552197,1.68540968042698,0.61246251376468,3.4393608847295,0.413303124703062,0,3.70900393917835,0.910161361938026,0.718618141816238,1.85169725349473,0.875829639103749,0.831192346452549,3.07284334616587,3.0648779579902,1.05166641234618,0.453728732640084,3.22901344239952,2.13557388818567,2.54318281391474,2.10063767259082,1.23663035086127,2.06112432036503,2.79175284497385,0.506328996723799,0.389748020644795,1.51460264546469,1.47279837827679,0.646584227275248,1.06502877754984,0.906768884048762,1.3564847384839,1.35282597214308,4.36393792945335,2.86804595389004,0.121973706129595,0,0,0.10366105501537,0,0.36497735907583,1.56449532329816,1.92972281457866,0,4.17931135228781,5.77503585335668,0.946454400318751,0.674338760312407,0.241011029883482,0.441175890929576,0.217879444092406,0.474541238222193,0.539325232640658,0.392442930250692,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0.514703430895577,2.96325770603289,0,4.92591964816991,1.01847289674383,0,0,4.3299402607582,1.27523445472584,0.587043471179108,2.16549671641611,9.25971025153221,5.51737041480335,0,1.71697232418975,0,0,0,1.87467667973554,1.00789276919316,1.27597587518148,1.16426079513703,2.3250715081117,1.53353071666084,0,0,0,0,0,0.126995788584338,0,1.17217447210047,1.71072446022705,0.308482478109971,0,0,0.112131084345361,0,1.466765716419,0.129271715757778,0,12.67954128834,1.32969058292435,3.12022310734098,0.257207374262142,0,3.19706614819319,0.285955987316295,0,0,0.977208552881205,0,1.58390374586686,0.904318131178758,0,0.399891964728228,0,0,0,0.958499421966331,1.14861935834114,2.85273810081437,5.93603357337075,6.98619496671304,3.04403637507822,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.24538298343828,3.00102312635806,1.89885516589815,8.94274704582471,10.7057393278297,6.78120384645919,9.13703036943163,0.902838299183157,0,1.03473071292505,0.664225598535437,0.737476674166813,2.34585759063824,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,1.66435439510497,1.5119514666484,0.496215615637554,0,1.68396056659844,0.896974044789907,1.02341449813341,0.64341568457443,0,4.1636617326717,1.9531789784444,2.79232330446951,2.59627214591811,3.25389059687886,0,2.80709058424599,0.460404944679482,1.14814448164607,2.73136752010076,1.04899531967539,0,0.0770153371044148,0,0,0.211103257785751,1.13733384070897,0.850468526382578,4.96606607034921,3.08454505380579,0,0,0,0.831076008928724,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0,0,0.96670718292122,4.1593126620954,4.60511024178389,2.89456802217514,1.39646318328756,2.75531718437034,4.85791776271775,0.178064071293475,0.661139661443912,1.53752053892085,0.255225424989168,0.50578890427775,1.85938219718914,1.88887408098384,1.3940745403212,0.308033580176089,1.06461206063404,0,0.18532421910392,1.14499909393593,0.744316738719335,1.2655176988749,0.762520775695299,0.255897791311334,8.98671874871233,0,0.78494864019923,0.899362287916574,0.823611089208164,0.942499218765491,0.404364963146632,1.58510321173008,0.842516912477962,0.48763373908959,0.974853958525138,1.05650146756755,1.50149902548784,0.424216295861138,4.52032466480971,0,0,1.75380354101505,2.31510213706675,3.27947376023316,0.405820753925408,1.239293992399,0.281695602532241,0.430234056612155,0.294747123039363,0.35667105148125,1.77380532035299,2.32218398827431,1.31717957183961,0,0,0.288666338176536,0,0,0.282431402330337,0,1.68471475667626,2.21715076768338,0.459446800413919,0,0,0,0,0,0,0,0,0,35.6117546447443,6.37104561550682,0.185803175125719,0,0,0,0,0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| ||
|short_description=p8@CAV1 | |||
}} | }} |
Latest revision as of 07:35, 25 September 2015
Short description: | p8@CAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAV1_5end |
Coexpression cluster: | C2875_Wilms_epithelioid_pharyngeal_neuroectodermal_Olfactory_Mesenchymal_lung |
Association with transcript: | 195bp_to_AL133639_5end |
EntrezGene: | CAV1 |
HGNC: | 1527 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.00e-09 | 121 |
endothelial cell of vascular tree | 3.76e-08 | 24 |
fat cell | 6.37e-08 | 15 |
lining cell | 3.09e-07 | 58 |
barrier cell | 3.09e-07 | 58 |
embryonic cell | 8.80e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.68e-09 | 99 |
multilaminar epithelium | 5.14e-08 | 83 |
epithelial vesicle | 5.07e-07 | 78 |
integument | 5.87e-07 | 46 |
integumental system | 5.87e-07 | 46 |
dense mesenchyme tissue | 8.25e-07 | 73 |
organ component layer | 8.49e-07 | 66 |