FFCP PHASE1:Hg19::chr7:139168434..139168465,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:139168434..139168465,- to FFCP PHASE1:Hg19::chr7:139168434..139168465,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=346689 | |EntrezGene=346689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24778 | |HGNC=24778 | ||
|TSSclassifier=strong | |||
|UniProt=A4D1S0 | |UniProt=A4D1S0 | ||
|association_with_transcript=0bp_to_ENST00000340940,NM_198508,uc003vvb.2,uc010lnc.2_5end | |||
|cluster_id=chr7:139168434..139168465,- | |||
|coexpression_cluster_id=C255 | |||
|description=CAGE_peak_2_at_KLRG2_5end | |||
|id=chr7:139168434..139168465,- | |||
|ontology_enrichment_celltype=CL:0000066!1.02e-10!254;CL:0000039!1.45e-10!7;CL:0000586!1.45e-10!7;CL:0002076!2.15e-08!43;CL:0002322!1.42e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.03e-22;7!CL:0000586;1.03e-22;7!CL:0002322;1.98e-15;5!CL:0000650;1.28e-07;2!CL:1000500;1.28e-07;2!CL:1000618;1.28e-07;2!CL:1001318;1.28e-07;2!CL:0002173;1.28e-07;2!CL:0000575;2.91e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.44e-23,7;CL:0000586,7.44e-23,7;CL:0002322,8.72e-16,5;CL:0000650,1.13e-07,2;CL:1000500,1.13e-07,2;CL:1000618,1.13e-07,2;CL:1001318,1.13e-07,2;CL:0002173,1.13e-07,2;CL:0000575,3.21e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.39e-11;10!UBERON:0005564;2.39e-11;10 | |||
|ontology_enrichment_disease=DOID:305!7.33e-13!106;DOID:0050687!1.93e-12!143;DOID:3095!8.38e-09!22;DOID:2994!8.38e-09!22;DOID:162!1.58e-07!235;DOID:14566!5.10e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.76e-10;22!DOID:2994;1.76e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.50e-10,22;DOID:2994,1.50e-10,22;DOID:305,1.49e-08,106;DOID:0050687,3.03e-07,143;DOID:4468,7.56e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.43e-08!169;UBERON:0000925!1.43e-08!169;UBERON:0006595!1.43e-08!169;UBERON:0001004!8.04e-08!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.28e-07;2!UBERON:0003838;1.28e-07;2!UBERON:0003586;1.28e-07;2!UBERON:0005169;1.28e-07;2!UBERON:0002321;1.28e-07;2!UBERON:0005215;1.28e-07;2!UBERON:0002303;1.28e-07;2!UBERON:0002319;1.28e-07;2!UBERON:0001041;3.95e-07;14!UBERON:0000473;4.67e-07;8!UBERON:0001829;5.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.13e-07,2;UBERON:0003838,1.13e-07,2;UBERON:0003586,1.13e-07,2;UBERON:0005169,1.13e-07,2;UBERON:0002321,1.13e-07,2;UBERON:0005215,1.13e-07,2;UBERON:0002303,1.13e-07,2;UBERON:0002319,1.13e-07,2;UBERON:0000473,4.64e-07,8;UBERON:0002553,6.93e-07,61;UBERON:0001829,9.05e-07,2 | |||
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| ||
|short_description=p2@KLRG2 | |||
}} | }} |
Latest revision as of 16:22, 16 September 2015
Short description: | p2@KLRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLRG2_5end |
Coexpression cluster: | C255_Wilms_leiomyoblastoma_kidney_adrenal_MCF7_epithelioid_Mast |
Association with transcript: | 0bp_to_ENST00000340940, NM_198508, uc003vvb.2, uc010lnc.2_5end |
EntrezGene: | KLRG2 |
HGNC: | 24778 |
UniProt: | A4D1S0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.44e-23 | 7 |
germ cell | 7.44e-23 | 7 |
embryonic stem cell | 8.72e-16 | 5 |
mesangial cell | 1.13e-07 | 2 |
kidney interstitial cell | 1.13e-07 | 2 |
juxtaglomerular complex cell | 1.13e-07 | 2 |
renal interstitial pericyte | 1.13e-07 | 2 |
extraglomerular mesangial cell | 1.13e-07 | 2 |
corneal epithelial cell | 3.21e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 1.13e-07 | 2 |
abdominal segment connective tissue | 1.13e-07 | 2 |
trunk connective tissue | 1.13e-07 | 2 |
interstitial tissue | 1.13e-07 | 2 |
extraglomerular mesangium | 1.13e-07 | 2 |
kidney interstitium | 1.13e-07 | 2 |
juxtaglomerular apparatus | 1.13e-07 | 2 |
mesangium | 1.13e-07 | 2 |
testis | 4.64e-07 | 8 |
anatomical cavity | 6.93e-07 | 61 |
major salivary gland | 9.05e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.50e-10 | 22 |
germ cell cancer | 1.50e-10 | 22 |
carcinoma | 1.49e-08 | 106 |
cell type cancer | 3.03e-07 | 143 |
clear cell adenocarcinoma | 7.56e-07 | 2 |