FFCP PHASE1:Hg19::chr8:117886563..117886605,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:117886563..117886605,- to FFCP PHASE1:Hg19::chr8:117886563..117886605,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5885 | |EntrezGene=5885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9811 | |HGNC=9811 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJK5,E5RJW1 | |UniProt=E5RJK5,E5RJW1 | ||
|association_with_transcript=0bp_to_ENST00000519837,ENST00000522699,ENST00000523547_5end | |||
|cluster_id=chr8:117886563..117886605,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_RAD21_5end | |||
|id=chr8:117886563..117886605,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.69e-08;12!CL:0002579;7.55e-08;3!CL:0002615;1.84e-07;3!CL:0002580;3.92e-07;3!CL:0002620;8.81e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.59e-08,12;CL:0002579,7.67e-08,3;CL:0002615,1.96e-07,3;CL:0002580,3.67e-07,3;CL:0002620,8.78e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.69e-09;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.50e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.16e-19;9!UBERON:0001557;9.16e-19;9!UBERON:0003688;1.21e-13;6!UBERON:0002358;1.21e-13;6!UBERON:0003684;1.21e-13;6!UBERON:0001178;1.21e-13;6!UBERON:0004457;9.51e-09;9!UBERON:0000042;9.51e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.47e-19,9;UBERON:0003688,1.32e-13,6;UBERON:0002358,1.32e-13,6;UBERON:0003684,1.32e-13,6;UBERON:0001178,1.32e-13,6;UBERON:0001557,1.07e-09,19 | |||
|phase1_expression=4.54195948176392,2.14100523890983,45.2463637148067,7.00513088471913,4.02264984984559,10.4680622892044,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0.284338464974843,0,0.553995408531877,0.601633342410425,0,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0,0,0.689491361473237,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.393419540227666,0,0.411202997999018,0,0,0,0,3.67654507721073,0,0.221533894583621,0.812411591295047,1.15282187753108,1.43065282315866,0.164437904603676,0.276350017785848,0.579606171470105,0,0,0,0.679856056185397,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,1.02290049474824,2.1686349143074,1.00267582127178,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.589405839739707,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.132409180813219,1.43418310374407,1.06400514659507,0,0,0,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0.280901613404497,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0.567160915800105,3.40840307808838,0,0,3.00091096084402,0.618315175430633,2.83404594050192,0.930584281657949,21.7721468591233,9.74370051611986,2.77677151668526,0.552299391853796,1.13152239773168,1.06502877754984,3.82857973265033,2.88253006927829,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,12.0672936040641,12.4752670657795,12.7735845838245,9.92645754591546,6.10062443458737,11.1517190982215,4.98875840192608,4.51309369788296,2.69323009862473,0,0,0,1.47008711385542,0,0,0,1.7658523976586,0.368965315629341,0.343135620597051,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.358234090811393,0.290633938513962,0,199.035948109961,11.7984901577723,0,0.720599767084807,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,2.17048642156577,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,1.15825045334063,0.61642896765115,1.61154866915906,7.3976195035728,0.197030760201927,0.646882724578552,0,0.254094624222463,1.30139853857622,1.54657762555539,0.167516265334349,1.91381625495949,0.749007023947182,0,0,0.49076596687656,0,0,0,1.07057393278297,0.157702415033935,0.937131319941706,0.902838299183157,0,0,0.664225598535437,0.553107505625109,0.434418072340414,0,0,0.413536052245775,0,0,0,0,0,6.69891081110698,5.52463103837025,4.77122160536225,33.9568745527608,12.2809739776009,13.6725832972066,7.42090332224955,0.154209693802656,0,0.328508624055237,0.519254429183621,0,0.604297247958111,0,0.0920809889358963,2.87036120411517,0.364182336013434,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0.640986253728404,0.247528499761764,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0,0.596586391912706,1.06838442776085,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.409499734223957,1.27264888758341,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,1.3754865741837,0,1.41904425628239,0.844430541190656,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0.371606350251437,0,5.0510708777374,6.69590345461054,3.19326994292507,0,0.423347165447766,0.324621940274555,0,0.684704037099577,0,2.50634477090067,0.846458889008016,0.321176150207399,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,6.24082951953879,1.42068073403207,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0.16480387422676,82.1277837617895,0,0.276283915531148,0.251932747854276,0.306806047506464,0.123084805461069,0.933118762985422,0.0898683511473268,0,0,0.591860433821602,0,2.22273980289274,0,0.185536196323703,0,0.520855522170466,0.262379999988587,0,0,0,0.945550727071745,0,0.291604613383254,1.38899995946634,0,0,0,0,0,0.219385397153973,2.61452312445576,0.557694977114413,0,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0.274792780205587,1.06606955203727,1.02193298195737,9.57579564009651,0.997270091400938,0,0,0,0,1.58936578980379,0,0,0,0,0,0,0,1.77912677208373,2.22415090103705,1.14864144456001,0.067401132980677,0,0,0.364909578431332,0,0.242780379534093,0.394584402849391,0,0,0.31593289814244,5.41164309892173,0.207376382794494,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,6.96645585281413,10.0863257578936,6.65135202130995,0.0969890164884194,0,0.225980740780532,0,0,0,0.391102765469606,0,0,1.59847687665704,0.288180834308212,6.87219576995494,0,0,0,0,0.135904206073614,0.313808538937,0.917983958726896,0,0,0,0,0,1.57732412567589,0,0,0,0.399358000997982,0,0,0,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0.0984274815147488,0.169346664131569,0,0,0,0,0.83088067605837,2.4747128070665,0,0.0607495566580247,0,0,0.104909176269996,0.316801009558219,0,0,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,2.62696066397885,0.511164065356265,0.453248366080503,0,0,0,0,0,0,0.320362237703084,0,0,0,0.197611631897944,0.121792598380896,0,0,0.5013797880454,0,0,0,0,0,0.250381861413,0.573409195690071,0.110929051536852,0,0.138348634936231,0.124980407962107,0.606596470166591,0,0.235265819698172,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.621748802331122,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0.800055529326307,2.06037423109676,0.336749488765919,2.52369796457302,0,29.3784980183648,0.521988583930423,0.226705925512272,0,1.22368352253234,0.358177682162975,19.4544911711412,6.1399533882038,0.353378291891762,1.3503982678964,0.675769762612291,0,1.72715170865599,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0.59996218756479,0,2.58322469491223,0,0.368211900503681,0,0,0.127894371303652,2.15649622793364,0,0.109209638192014,0.33946505990805,0,0.495743057036009,0.558644917973244,0.318004350653419,0.394308725006267,0,0.705351887381368,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0.0981477185010256,0,0.366857197043358,0.115525666150338,8.77178819574484,0,9.34906243946491,0,0.80682027481408,0,0,0.327543835020193,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0.527613733078862,0,0,0.336283722218824,0,0,0,0.345701962667338,0,0.135939465953663,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0.158013611732727,0,0,0.801711364730253,0.62164849248911,1.0243108625637,0.691259661814092,0,0,0,0,0.9164274741762,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0.485710993059139,0,0.596852325484105,1.30812099855325,1.80713731262336,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0.679708458751268,0.0939839179798536,0.193373663920732,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0.631086248772738,0.203974470572744,0,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,2.27336094654718,1.60778478093707,0,0.310298987585686,0,0,0.322944549180031,0.124149428591716,0.448527450322454,0.12729431655633,0,0,0,0,0,0.332660356546013,0,0.533636729388577,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |phase1_expression=4.54195948176392,2.14100523890983,45.2463637148067,7.00513088471913,4.02264984984559,10.4680622892044,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0.284338464974843,0,0.553995408531877,0.601633342410425,0,0,0,0,0,0,0,0.232429036905685,0,0,0.575384784644301,0,0,0.689491361473237,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0.56738522469114,0,0,0,0.217188844705117,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0.393419540227666,0,0.411202997999018,0,0,0,0,3.67654507721073,0,0.221533894583621,0.812411591295047,1.15282187753108,1.43065282315866,0.164437904603676,0.276350017785848,0.579606171470105,0,0,0,0.679856056185397,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0,0.144824403882799,0,0,1.02290049474824,2.1686349143074,1.00267582127178,0.579386075843295,0,0,0.283604451492204,0.221729397462564,0.175669571386252,0.589405839739707,0,0,0.649094787309367,0.174129737299267,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.337834441449967,0,0,0,0,0,0,0.496971951695318,1.01304409331664,0.132409180813219,1.43418310374407,1.06400514659507,0,0,0,0.622422070799533,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0.280901613404497,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0.30648779579902,0.150238058906597,0.567160915800105,3.40840307808838,0,0,3.00091096084402,0.618315175430633,2.83404594050192,0.930584281657949,21.7721468591233,9.74370051611986,2.77677151668526,0.552299391853796,1.13152239773168,1.06502877754984,3.82857973265033,2.88253006927829,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,12.0672936040641,12.4752670657795,12.7735845838245,9.92645754591546,6.10062443458737,11.1517190982215,4.98875840192608,4.51309369788296,2.69323009862473,0,0,0,1.47008711385542,0,0,0,1.7658523976586,0.368965315629341,0.343135620597051,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0.358234090811393,0.290633938513962,0,199.035948109961,11.7984901577723,0,0.720599767084807,0,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.4400297149257,0,0,0,0,0,0,0,0.266422179016099,0.428933980974443,2.17048642156577,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,1.42636905040718,1.15825045334063,0.61642896765115,1.61154866915906,7.3976195035728,0.197030760201927,0.646882724578552,0,0.254094624222463,1.30139853857622,1.54657762555539,0.167516265334349,1.91381625495949,0.749007023947182,0,0,0.49076596687656,0,0,0,1.07057393278297,0.157702415033935,0.937131319941706,0.902838299183157,0,0,0.664225598535437,0.553107505625109,0.434418072340414,0,0,0.413536052245775,0,0,0,0,0,6.69891081110698,5.52463103837025,4.77122160536225,33.9568745527608,12.2809739776009,13.6725832972066,7.42090332224955,0.154209693802656,0,0.328508624055237,0.519254429183621,0,0.604297247958111,0,0.0920809889358963,2.87036120411517,0.364182336013434,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0.640986253728404,0.247528499761764,0.574265537996172,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0,0.596586391912706,1.06838442776085,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.409499734223957,1.27264888758341,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,1.3754865741837,0,1.41904425628239,0.844430541190656,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.490080431962063,0.371606350251437,0,5.0510708777374,6.69590345461054,3.19326994292507,0,0.423347165447766,0.324621940274555,0,0.684704037099577,0,2.50634477090067,0.846458889008016,0.321176150207399,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,6.24082951953879,1.42068073403207,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0.16480387422676,82.1277837617895,0,0.276283915531148,0.251932747854276,0.306806047506464,0.123084805461069,0.933118762985422,0.0898683511473268,0,0,0.591860433821602,0,2.22273980289274,0,0.185536196323703,0,0.520855522170466,0.262379999988587,0,0,0,0.945550727071745,0,0.291604613383254,1.38899995946634,0,0,0,0,0,0.219385397153973,2.61452312445576,0.557694977114413,0,0.113942055847001,0.23056390438806,0,0.108647371922008,0,0.274792780205587,1.06606955203727,1.02193298195737,9.57579564009651,0.997270091400938,0,0,0,0,1.58936578980379,0,0,0,0,0,0,0,1.77912677208373,2.22415090103705,1.14864144456001,0.067401132980677,0,0,0.364909578431332,0,0.242780379534093,0.394584402849391,0,0,0.31593289814244,5.41164309892173,0.207376382794494,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,6.96645585281413,10.0863257578936,6.65135202130995,0.0969890164884194,0,0.225980740780532,0,0,0,0.391102765469606,0,0,1.59847687665704,0.288180834308212,6.87219576995494,0,0,0,0,0.135904206073614,0.313808538937,0.917983958726896,0,0,0,0,0,1.57732412567589,0,0,0,0.399358000997982,0,0,0,0,0,0.157566364614447,0.329663433524666,0.202210631562555,0.0984274815147488,0.169346664131569,0,0,0,0,0.83088067605837,2.4747128070665,0,0.0607495566580247,0,0,0.104909176269996,0.316801009558219,0,0,0,0,0.25426853765475,0.542999601753713,0,0.326587360109409,0,2.62696066397885,0.511164065356265,0.453248366080503,0,0,0,0,0,0,0.320362237703084,0,0,0,0.197611631897944,0.121792598380896,0,0,0.5013797880454,0,0,0,0,0,0.250381861413,0.573409195690071,0.110929051536852,0,0.138348634936231,0.124980407962107,0.606596470166591,0,0.235265819698172,0,0.28984205722165,0.149254802886874,0,0,0,0,0,0.228840068396924,0,0.621748802331122,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0.800055529326307,2.06037423109676,0.336749488765919,2.52369796457302,0,29.3784980183648,0.521988583930423,0.226705925512272,0,1.22368352253234,0.358177682162975,19.4544911711412,6.1399533882038,0.353378291891762,1.3503982678964,0.675769762612291,0,1.72715170865599,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0.59996218756479,0,2.58322469491223,0,0.368211900503681,0,0,0.127894371303652,2.15649622793364,0,0.109209638192014,0.33946505990805,0,0.495743057036009,0.558644917973244,0.318004350653419,0.394308725006267,0,0.705351887381368,0,0,0,0,0,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0.0981477185010256,0,0.366857197043358,0.115525666150338,8.77178819574484,0,9.34906243946491,0,0.80682027481408,0,0,0.327543835020193,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0.527613733078862,0,0,0.336283722218824,0,0,0,0.345701962667338,0,0.135939465953663,0,0.118193840883968,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0.158013611732727,0,0,0.801711364730253,0.62164849248911,1.0243108625637,0.691259661814092,0,0,0,0,0.9164274741762,0,0,0,0.098150233615243,0.243835849964539,0,0.102662806856247,0,0.485710993059139,0,0.596852325484105,1.30812099855325,1.80713731262336,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0.679708458751268,0.0939839179798536,0.193373663920732,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0.631086248772738,0.203974470572744,0,0,0.371995018166751,0.462175628631418,0.865253124247578,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,2.27336094654718,1.60778478093707,0,0.310298987585686,0,0,0.322944549180031,0.124149428591716,0.448527450322454,0.12729431655633,0,0,0,0,0,0.332660356546013,0,0.533636729388577,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | ||
|short_description=p3@RAD21 | |||
}} | }} |
Latest revision as of 19:05, 15 September 2015
Short description: | p3@RAD21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAD21_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000519837, ENST00000522699, ENST00000523547_5end |
EntrezGene: | RAD21 |
HGNC: | 9811 |
UniProt: | E5RJK5E5RJW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.59e-08 | 12 |
omentum preadipocyte | 7.67e-08 | 3 |
adipocyte of omentum tissue | 1.96e-07 | 3 |
preadipocyte of the breast | 3.67e-07 | 3 |
skin fibroblast | 8.78e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.47e-19 | 9 |
omentum | 1.32e-13 | 6 |
peritoneum | 1.32e-13 | 6 |
abdominal cavity | 1.32e-13 | 6 |
visceral peritoneum | 1.32e-13 | 6 |
upper respiratory tract | 1.07e-09 | 19 |