FFCP PHASE1:Hg19::chr9:74061895..74061905,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VXD2 | |UniProt=Q4VXD2 | ||
|association_with_transcript=-75bp_to_ENST00000354500,uc004aii.2_5end | |||
|cluster_id=chr9:74061895..74061905,- | |||
|coexpression_cluster_id=C899 | |||
|description=CAGE_peak_14_at_TRPM3_5end | |||
|id=chr9:74061895..74061905,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.28e-84;3 | |||
|ontology_enrichment_disease=DOID:0050619!1.41e-08!1;DOID:1357!1.41e-08!1;DOID:5409!1.20e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.73e-29;1!DOID:1357;2.73e-29;1!DOID:4362;5.08e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.16e-29,1;DOID:1357,3.16e-29,1;DOID:4362,5.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.67e-35!57;UBERON:0005068!3.67e-35!57;UBERON:0006241!3.67e-35!57;UBERON:0007135!3.67e-35!57;UBERON:0000955!3.80e-35!69;UBERON:0006238!3.80e-35!69;UBERON:0002616!7.12e-34!59;UBERON:0001017!4.06e-29!82;UBERON:0005743!1.28e-27!86;UBERON:0000033!4.02e-25!123;UBERON:0000073!1.06e-24!94;UBERON:0001016!1.06e-24!94;UBERON:0000153!8.91e-24!129;UBERON:0007811!8.91e-24!129;UBERON:0003075!2.81e-22!86;UBERON:0007284!2.81e-22!86;UBERON:0002780!2.36e-21!41;UBERON:0001890!2.36e-21!41;UBERON:0006240!2.36e-21!41;UBERON:0002346!3.82e-21!90;UBERON:0003080!8.31e-21!42;UBERON:0004733!1.03e-20!12;UBERON:0002028!1.03e-20!12;UBERON:0007277!1.03e-20!12;UBERON:0004732!4.37e-19!13;UBERON:0002791!2.21e-18!33;UBERON:0002619!4.66e-18!22;UBERON:0007023!5.16e-18!115;UBERON:0002020!6.46e-18!34;UBERON:0003528!6.46e-18!34;UBERON:0001893!8.26e-18!34;UBERON:0003076!1.78e-16!15;UBERON:0003057!1.78e-16!15;UBERON:0000956!7.55e-16!25;UBERON:0000203!7.55e-16!25;UBERON:0000007!2.05e-15!2;UBERON:0001869!2.09e-15!32;UBERON:0001950!3.27e-15!20;UBERON:0003056!9.24e-14!61;UBERON:0004121!9.42e-14!169;UBERON:0000924!2.39e-13!173;UBERON:0006601!2.39e-13!173;UBERON:0000349!4.05e-13!5;UBERON:0002680!4.53e-13!9;UBERON:0001895!4.53e-13!9;UBERON:0010092!4.53e-13!9;UBERON:0002037!1.56e-11!6;UBERON:0006215!1.56e-11!6;UBERON:0000025!2.68e-10!194;UBERON:0001896!5.68e-10!3;UBERON:0005290!5.68e-10!3;UBERON:0010096!5.68e-10!3;UBERON:0001764!1.41e-08!1;UBERON:0001825!1.41e-08!1;UBERON:0004111!1.45e-08!241;UBERON:0003112!2.89e-08!1;UBERON:0000032!2.89e-08!1;UBERON:0005253!2.89e-08!1;UBERON:0003128!2.89e-08!1;UBERON:0002241!2.89e-08!1;UBERON:0001703!2.89e-08!1;UBERON:0004761!2.89e-08!1;UBERON:0009617!2.89e-08!1;UBERON:0002298!2.90e-08!8;UBERON:0003296!3.84e-08!4;UBERON:0010133!3.84e-08!4;UBERON:0002022!4.11e-08!1;UBERON:0002336!5.43e-08!1;UBERON:0001018!5.43e-08!1;UBERON:0002473!5.43e-08!1;UBERON:0005340!5.43e-08!1;UBERON:0002316!5.43e-08!1;UBERON:0003544!5.43e-08!1;UBERON:0001020!5.43e-08!1;UBERON:0005970!5.43e-08!1;UBERON:0002437!5.43e-08!1;UBERON:0002581!5.82e-08!1;UBERON:0001882!6.68e-08!1;UBERON:0005403!6.68e-08!1;UBERON:0000064!1.19e-07!219;UBERON:0000477!1.78e-07!286;UBERON:0000475!3.00e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.48e-43;6!UBERON:0001764;2.73e-29;1!UBERON:0001825;2.73e-29;1!UBERON:0002680;6.82e-29;9!UBERON:0001895;6.82e-29;9!UBERON:0004733;6.79e-22;12!UBERON:0002028;6.79e-22;12!UBERON:0004732;2.82e-20;13!UBERON:0000007;1.54e-15;2!UBERON:0001876;2.21e-15;2!UBERON:0000073;2.60e-10;53!UBERON:0002616;2.60e-10;53!UBERON:0003296;1.96e-08;4!UBERON:0010133;1.96e-08;4!UBERON:0001016;4.78e-07;83!UBERON:0000349;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.62e-43,6;UBERON:0006215,5.62e-43,6;UBERON:0001764,3.16e-29,1;UBERON:0001825,3.16e-29,1;UBERON:0002680,5.64e-29,9;UBERON:0001895,5.64e-29,9;UBERON:0010092,5.64e-29,9;UBERON:0004733,5.89e-22,12;UBERON:0002028,5.89e-22,12;UBERON:0007277,5.89e-22,12;UBERON:0004732,2.47e-20,13;UBERON:0003076,9.83e-18,15;UBERON:0003057,9.83e-18,15;UBERON:0000007,1.54e-15,2;UBERON:0001876,2.74e-15,2;UBERON:0000073,1.91e-13,53;UBERON:0002616,1.91e-13,53;UBERON:0001049,9.32e-13,56;UBERON:0005068,9.32e-13,56;UBERON:0006241,9.32e-13,56;UBERON:0007135,9.32e-13,56;UBERON:0000955,1.89e-10,68;UBERON:0006238,1.89e-10,68;UBERON:0001017,7.39e-09,81;UBERON:0003075,7.39e-09,82;UBERON:0007284,7.39e-09,82;UBERON:0002346,1.84e-08,86;UBERON:0003296,1.96e-08,4;UBERON:0010133,1.96e-08,4;UBERON:0001016,5.13e-08,89;UBERON:0010371,4.73e-07,104;UBERON:0000349,6.77e-07,5 | |||
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|short_description=p14@TRPM3 | |||
}} | }} |
Latest revision as of 18:57, 17 September 2015
Short description: | p14@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TRPM3_5end |
Coexpression cluster: | C899_pituitary_cerebellum_occipital_parietal_testicular_brain_temporal |
Association with transcript: | -75bp_to_ENST00000354500, uc004aii.2_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | Q4VXD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.62e-43 | 6 |
rhombic lip | 5.62e-43 | 6 |
maxillary sinus | 3.16e-29 | 1 |
paranasal sinus | 3.16e-29 | 1 |
regional part of metencephalon | 5.64e-29 | 9 |
metencephalon | 5.64e-29 | 9 |
future metencephalon | 5.64e-29 | 9 |
segmental subdivision of hindbrain | 5.89e-22 | 12 |
hindbrain | 5.89e-22 | 12 |
presumptive hindbrain | 5.89e-22 | 12 |
segmental subdivision of nervous system | 2.47e-20 | 13 |
posterior neural tube | 9.83e-18 | 15 |
chordal neural plate | 9.83e-18 | 15 |
pituitary gland | 1.54e-15 | 2 |
amygdala | 2.74e-15 | 2 |
regional part of nervous system | 1.91e-13 | 53 |
regional part of brain | 1.91e-13 | 53 |
neural tube | 9.32e-13 | 56 |
neural rod | 9.32e-13 | 56 |
future spinal cord | 9.32e-13 | 56 |
neural keel | 9.32e-13 | 56 |
brain | 1.89e-10 | 68 |
future brain | 1.89e-10 | 68 |
central nervous system | 7.39e-09 | 81 |
neural plate | 7.39e-09 | 82 |
presumptive neural plate | 7.39e-09 | 82 |
neurectoderm | 1.84e-08 | 86 |
gland of diencephalon | 1.96e-08 | 4 |
neuroendocrine gland | 1.96e-08 | 4 |
nervous system | 5.13e-08 | 89 |
ecto-epithelium | 4.73e-07 | 104 |
limbic system | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.16e-29 | 1 |
maxillary sinus cancer | 3.16e-29 | 1 |
cervical cancer | 5.08e-07 | 5 |